Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000844g0250 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.0e-39 165.2 78 100.0
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-20 101.3 84 65.5
Nitab4.5_0008337g0090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.3e-14 82.8 37 91.9
Nitab4.5_0002739g0100 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.7e-14 81.3 37 91.9
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 3.7e-14 81.3 37 91.9
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 6.3e-14 80.5 37 91.9
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 6.3e-14 80.5 37 91.9
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 6.3e-14 80.5 37 91.9
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 6.3e-14 80.5 37 91.9
BraSC77t46636Z Brassica rapa HOM05D001560 ORTHO05D003613 6.3e-14 80.5 37 91.9
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 6.3e-14 80.5 37 91.9
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 6.3e-14 80.5 37 91.9
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 6.3e-14 80.5 37 91.9
Ah.01g011700 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
HanXRQChr08g0236201 Helianthus annuus HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 1.1e-13 79.7 37 91.9
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 1.4e-13 79.3 37 91.9
FvH4_2g28480 Fragaria vesca HOM05D001560 ORTHO05D003613 1.4e-13 79.3 37 91.9
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 1.4e-13 79.3 37 91.9
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.8e-13 79.0 37 89.2
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 3.2e-13 78.2 37 89.2
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 4.1e-13 77.8 38 86.8
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 5.4e-13 77.4 37 89.2
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 5.4e-13 77.4 37 89.2
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 5.4e-13 77.4 37 89.2
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 5.4e-13 77.4 36 91.7
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 5.4e-13 77.4 37 89.2
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 7.0e-13 77.0 37 89.2
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 7.0e-13 77.0 37 89.2
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 7.0e-13 77.0 37 89.2
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 7.0e-13 77.0 37 89.2
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 7.0e-13 77.0 37 89.2
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 7.0e-13 77.0 37 89.2
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 7.0e-13 77.0 37 89.2
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 1.2e-12 76.3 37 86.5
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-12 75.9 37 86.5
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.7e-12 75.1 37 86.5
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-12 73.9 37 86.5
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-12 73.9 37 86.5
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-12 73.9 37 86.5
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-12 73.9 37 86.5
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-12 73.9 37 86.5
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-12 73.9 37 86.5
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 1.0e-11 73.2 37 86.5
Nitab4.5_0001152g1040 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.7e-11 72.4 37 83.8
Solyc09g057830.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.7e-11 72.4 37 81.1
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-11 72.0 37 83.8
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 2.3e-11 72.0 37 86.5
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 86.5
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 86.5
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 86.5
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 86.5
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 83.8
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 83.8
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 83.8
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 83.8
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 81.1
TPR.G33726 Trifolium pratense HOM05D001560 ORTHO05D003613 2.9e-11 71.6 37 83.8
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 3.9e-11 71.2 37 83.8
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 5.0e-11 70.9 37 83.8
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 8.6e-11 70.1 37 81.1
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-10 69.7 37 81.1
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-10 69.7 37 81.1
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-10 68.9 32 90.6
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-10 68.9 32 90.6
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 1.9e-10 68.9 37 83.8
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-10 68.2 37 78.4
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 4.3e-10 67.8 37 81.1
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-10 67.8 32 87.5
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 5.6e-10 67.4 32 87.5
Solyc09g056080.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 7.3e-10 67.0 37 78.4
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 9.5e-10 66.6 32 87.5
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-09 65.9 37 78.4
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-09 65.9 32 87.5
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-09 65.9 36 77.8
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 2.1e-09 65.5 32 84.4
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 8.0e-09 63.5 75 48.0
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.8e-08 62.4 37 70.3
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.1e-08 61.6 31 83.9
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 4.0e-08 61.2 32 81.2
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 5.2e-08 60.8 37 70.3
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 1.2e-07 59.7 65 52.3
Solyc09g056310.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 4.4e-07 57.8 34 73.5
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 7.5e-07 57.0 78 47.4
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 1.3e-06 56.2 31 83.9


User provided reference genes

Program Settings