Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000816g0010 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.4e-67 260.0 259 100.0
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 5.7e-29 132.5 259 77.6
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 1.1e-24 118.2 231 70.6
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 1.3e-20 104.8 231 61.9
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 6.3e-20 102.4 261 61.7
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.4e-19 100.5 231 51.1
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 5.9e-18 95.9 163 66.3
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.0e-17 95.1 231 52.4
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.7e-17 94.4 231 61.0
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 2.2e-17 94.0 282 50.7
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 1.1e-16 91.7 231 46.8
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.4e-16 91.3 164 63.4
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 2.1e-15 87.4 259 68.3
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 4.7e-15 86.3 164 62.2
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 4.7e-15 86.3 164 62.2
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 4.7e-15 86.3 206 51.9
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 1.8e-14 84.3 229 62.0
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 3.9e-14 83.2 164 62.2
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 5.2e-14 82.8 231 52.8
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 8.8e-14 82.0 231 63.6
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.1e-13 81.6 141 60.3
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 2.0e-13 80.9 231 53.7
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.0e-13 80.9 230 53.5
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.6e-13 80.5 231 58.9
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 4.4e-13 79.7 231 53.2
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 5.7e-13 79.3 226 46.5
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 5.7e-13 79.3 166 61.4
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 9.7e-13 78.6 140 52.1
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 1.3e-12 78.2 157 58.0
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 2.2e-12 77.4 231 58.9
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 2.8e-12 77.0 259 52.1
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 4.8e-12 76.3 231 61.5
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 4.8e-12 76.3 228 59.2
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 4.8e-12 76.3 161 50.3
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 6.3e-12 75.9 163 52.1
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 8.2e-12 75.5 231 58.4
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 8.2e-12 75.5 164 59.1
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.4e-11 74.7 261 52.1
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 1.8e-11 74.3 164 58.5
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.1e-11 73.6 231 46.8
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 3.1e-11 73.6 231 51.5
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 5.3e-11 72.8 231 47.6
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 5.3e-11 72.8 101 49.5
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 5.3e-11 72.8 164 61.6
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 7.0e-11 72.4 231 54.5
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 7.0e-11 72.4 162 51.2
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 7.0e-11 72.4 232 58.2
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 9.1e-11 72.0 231 51.5
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 1.2e-10 71.6 163 58.3
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 1.2e-10 71.6 225 50.7
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 4.5e-10 69.7 112 66.1
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 5.9e-10 69.3 164 52.4
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 5.9e-10 69.3 164 52.4
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 7.7e-10 68.9 227 50.7
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 7.7e-10 68.9 161 50.3
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 7.7e-10 68.9 231 58.9
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.3e-09 68.2 231 48.5
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.7e-09 67.8 224 42.9
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 2.2e-09 67.4 161 49.7
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 2.9e-09 67.0 169 40.2
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.9e-09 67.0 231 47.2
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 2.9e-09 67.0 231 58.0
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 5.0e-09 66.2 143 60.8
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 5.0e-09 66.2 261 59.4
vmacro19891 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 5.0e-09 66.2 259 59.5
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 6.5e-09 65.9 231 54.1
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 6.5e-09 65.9 164 58.5
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 6.5e-09 65.9 159 56.0
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 6.5e-09 65.9 225 58.2
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 8.5e-09 65.5 231 50.6
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.1e-08 65.1 161 51.6
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.1e-08 65.1 161 51.6
Aa31LG1G3970 Aethionema arabicum HOM05D003347 ORTHO05D003821 1.5e-08 64.7 156 50.6
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.5e-08 64.7 231 51.9
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 1.5e-08 64.7 90 46.7
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 1.9e-08 64.3 90 47.8
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 2.5e-08 63.9 164 57.9
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.5e-08 63.9 111 44.1
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 3.2e-08 63.5 163 50.9
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 3.2e-08 63.5 231 56.3
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 3.2e-08 63.5 231 53.2
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 4.2e-08 63.2 232 54.3
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 4.2e-08 63.2 154 55.8
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 4.2e-08 63.2 259 54.4
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 7.2e-08 62.4 156 44.2
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 7.2e-08 62.4 156 44.2
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 7.2e-08 62.4 160 50.0
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 7.2e-08 62.4 232 45.7
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 7.2e-08 62.4 261 53.3
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 7.2e-08 62.4 231 35.5
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 9.4e-08 62.0 231 51.9
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 9.4e-08 62.0 225 53.8
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 1.2e-07 61.6 112 69.6
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 1.6e-07 61.2 92 45.7
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 1.6e-07 61.2 92 44.6
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 2.1e-07 60.8 164 57.9
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 2.7e-07 60.5 163 59.5
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 2.7e-07 60.5 161 51.6
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.7e-07 60.5 92 45.7
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 4.7e-07 59.7 112 58.9
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 6.1e-07 59.3 164 57.9
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 6.1e-07 59.3 164 56.1
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 8.0e-07 58.9 232 39.2
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 8.0e-07 58.9 154 50.6
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.8e-06 57.8 47 70.2
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.0e-06 57.0 157 50.3
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 4.0e-06 56.6 156 32.1
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 4.0e-06 56.6 163 54.6
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 4.0e-06 56.6 163 52.8
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 6.7e-06 55.8 87 43.7
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 6.7e-06 55.8 164 50.0
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 8.8e-06 55.5 89 42.7


User provided reference genes

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