Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000712g0160 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.0e-104 380.6 209 100.0
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.0e-66 255.0 175 73.7
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.2e-60 234.2 180 70.0
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-58 230.7 178 69.7
Nitab4.5_0009966g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.4e-44 183.0 168 58.9
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.5e-41 173.7 197 47.7
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.6e-40 169.1 201 47.8
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.1e-39 166.0 167 52.7
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.6e-35 152.1 152 55.9
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 6.6e-34 148.3 153 46.4
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.9e-31 138.3 190 46.3
Nitab4.5_0009529g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.9e-31 138.3 134 56.7
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 1.5e-30 137.1 180 45.6
Nitab4.5_0008563g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.7e-27 126.3 115 57.4
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.6e-27 125.6 145 50.3
Nitab4.5_0004672g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.0e-26 122.9 181 50.8
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.9e-26 122.5 154 39.0
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.4e-23 114.0 152 36.8
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 5.3e-23 112.1 175 36.6
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.4e-22 109.4 90 66.7
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 7.6e-22 108.2 168 34.5
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 7.6e-22 108.2 142 36.6
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 4.9e-21 105.5 155 38.1
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-20 104.4 171 37.4
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 5.5e-20 102.1 169 33.1
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 4.6e-19 99.0 164 33.5
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 1.3e-18 97.4 170 35.9
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 1.8e-18 97.1 176 34.7
Nitab4.5_0001158g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.1e-18 95.5 143 52.4
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 2.5e-17 93.2 168 31.5
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 7.4e-17 91.7 158 32.3
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.6e-17 91.3 75 61.3
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 9.6e-17 91.3 130 38.5
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 1.6e-16 90.5 144 35.4
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 3.7e-16 89.4 178 31.5
VMungo0720G1591 Vigna mungo HOM05D002954 ORTHO05D000385 3.7e-16 89.4 158 31.0
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 6.2e-16 88.6 136 37.5
Lj2g0015436 Lotus japonicus HOM05D002954 ORTHO05D010308 1.1e-15 87.8 158 26.6
Nitab4.5_0000154g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.1e-15 86.3 144 34.0
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 9.0e-15 84.7 150 32.0
Phvul.008G147600 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 1.5e-14 84.0 162 29.6
Nitab4.5_0007527g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-14 83.6 139 34.5
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.0e-14 83.6 129 37.2
PGSC0003DMG400040446 Solanum tuberosum HOM05D002954 ORTHO05D003353 2.0e-14 83.6 134 38.8
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.4e-14 82.8 140 35.7
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 3.4e-14 82.8 158 29.1
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.5e-14 82.4 159 33.3
Nitab4.5_0003141g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.8e-14 82.0 116 39.7
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 7.6e-14 81.6 150 30.0
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 7.6e-14 81.6 177 30.5
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 7.6e-14 81.6 177 30.5
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 1.0e-13 81.3 150 30.0
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 2.9e-13 79.7 148 31.8
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.5e-13 78.6 144 32.6
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 8.4e-13 78.2 163 28.8
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 1.1e-12 77.8 163 29.4
arahy.Tifrunner.gnm1.ann1.LZRM5J Arachis hypogaea HOM05D011000 ORTHO05D000385 1.4e-12 77.4 153 30.7
arahy.Tifrunner.gnm1.ann1.WG3QGY Arachis hypogaea HOM05D002954 ORTHO05D003353 1.9e-12 77.0 161 29.2
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 1.9e-12 77.0 133 33.8
Peaxi162Scf00914g00054 Petunia axillaris HOM05D002954 ORTHO05D003353 5.5e-12 75.5 136 34.6
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 7.1e-12 75.1 109 38.5
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.1e-12 75.1 45 80.0
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 9.3e-12 74.7 155 29.0
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 9.3e-12 74.7 152 28.9
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.1e-11 72.0 94 38.3
arahy.Tifrunner.gnm1.ann1.2XU2QD Arachis hypogaea HOM05D002954 ORTHO05D003353 7.9e-11 71.6 89 40.4
Nitab4.5_0004792g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.9e-11 71.6 49 69.4
Peaxi162Scf01071g00046 Petunia axillaris HOM05D040622 ORTHO05D010308 7.9e-11 71.6 133 28.6
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 1.0e-10 71.2 161 29.2
arahy.Tifrunner.gnm1.ann1.E8HHXW Arachis hypogaea HOM05D002954 ORTHO05D010308 1.3e-10 70.9 152 25.0
arahy.Tifrunner.gnm1.ann1.Y6RTQD Arachis hypogaea HOM05D002954 ORTHO05D010308 1.8e-10 70.5 152 25.0
arahy.Tifrunner.gnm1.ann1.Q8JFIC Arachis hypogaea HOM05D011000 ORTHO05D003353 2.3e-10 70.1 152 28.3
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 2.3e-10 70.1 164 27.4
Peaxi162Scf00168g00125 Petunia axillaris HOM05D002954 ORTHO05D003353 3.9e-10 69.3 81 40.7
Nitab4.5_0007579g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.7e-10 68.6 44 72.7
Nitab4.5_0000562g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-09 67.4 89 38.2
Nitab4.5_0004481g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.3e-09 66.2 74 41.9
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 4.3e-09 65.9 155 28.4
Peaxi162Scf00168g00136 Petunia axillaris HOM05D002954 ORTHO05D003353 4.3e-09 65.9 75 41.3
Lj6g0018783 Lotus japonicus HOM05D002954 ORTHO05D000385 7.4e-09 65.1 161 28.0
Nitab4.5_0000386g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.7e-09 64.7 121 31.4
Nitab4.5_0000668g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.7e-09 64.7 86 33.7
Nitab4.5_0001542g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-08 64.3 82 35.4
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 1.6e-08 63.9 163 28.2
Peaxi162Scf02065g00005 Petunia axillaris HOM05D002954 ORTHO05D010308 2.2e-08 63.5 74 36.5
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.8e-08 63.2 51 58.8
Psat5g088160 Pisum sativum HOM05D002954 ORTHO05D003353 3.7e-08 62.8 68 48.5
Phvul.011G161300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 6.3e-08 62.0 123 35.8
arahy.Tifrunner.gnm1.ann1.QU52XI Arachis hypogaea HOM05D011000 ORTHO05D003353 8.2e-08 61.6 141 26.2
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-07 61.2 48 64.6
A09p53580 Brassica napus HOM05D008309 ORTHO05D010308 2.4e-07 60.1 166 30.7
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 2.4e-07 60.1 159 30.8
Gohir.D04G003250 Gossypium hirsutum HOM05D001309 ORTHO05D000385 2.4e-07 60.1 136 25.7
TPR.G40235 Trifolium pratense HOM05D002954 ORTHO05D010767 3.1e-07 59.7 74 43.2
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 3.1e-07 59.7 137 29.9
Zm00001eb380870 Zea mays HOM05D008576 ORTHO05D000385 5.3e-07 58.9 137 29.9
C03p39230 Brassica napus HOM05D008309 ORTHO05D010308 6.9e-07 58.5 168 29.8
C04p50470 Brassica napus HOM05D008309 ORTHO05D010308 6.9e-07 58.5 158 30.4
Peaxi162Scf00603g00514 Petunia axillaris HOM05D002954 ORTHO05D003353 6.9e-07 58.5 64 48.4
Os08g0367300 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 9.0e-07 58.2 148 27.0
Os02g0129000 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 1.2e-06 57.8 148 27.0
arahy.Tifrunner.gnm1.ann1.I134XL Arachis hypogaea HOM05D011000 ORTHO05D003353 1.5e-06 57.4 106 29.2
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.6e-06 56.6 131 29.0
arahy.Tifrunner.gnm1.ann1.FX9Q6E Arachis hypogaea HOM05D002954 ORTHO05D003353 3.4e-06 56.2 92 38.0
Psat4g174600 Pisum sativum HOM05D002954 ORTHO05D003353 4.5e-06 55.8 87 34.5
Zm00001eb425380 Zea mays HOM05D008576 ORTHO05D000385 4.5e-06 55.8 153 26.8
BolC7t46146H Brassica oleracea HOM05D008309 ORTHO05D010308 5.9e-06 55.5 165 30.3
Zm00001eb181050 Zea mays HOM05D008576 ORTHO05D000385 5.9e-06 55.5 112 33.0
Lj1g0024925 Lotus japonicus HOM05D002954 ORTHO05D003353 7.7e-06 55.1 89 38.2
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.7e-06 55.1 142 25.4
Zm00001eb439020 Zea mays HOM05D008576 ORTHO05D000385 7.7e-06 55.1 153 27.5
COL.COLO4_22621 Corchorus olitorius HOM05D008576 ORTHO05D000385 1.0e-05 54.7 126 33.3
Os07g0212400 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 1.0e-05 54.7 148 25.7
Zm00001eb234630 Zea mays HOM05D008576 ORTHO05D000385 1.0e-05 54.7 153 26.8


User provided reference genes

Program Settings