Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 6.3e-62 240.7 133 100.0
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 2.5e-50 202.2 133 85.0
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 6.5e-35 151.0 136 72.1
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 2.1e-33 146.0 133 69.9
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 8.0e-33 144.1 133 69.2
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 8.8e-32 140.6 132 68.9
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 2.3e-24 115.9 141 60.3
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 6.8e-24 114.4 141 59.6
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 2.2e-22 109.4 140 60.0
Peaxi162Scf00080g00151 Petunia axillaris HOM05D007617 ORTHO05D007195 2.4e-21 105.9 131 56.5
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 6.1e-17 91.3 137 51.1
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 7.5e-15 84.3 139 47.5
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 1.1e-13 80.5 131 48.1
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 1.4e-13 80.1 141 48.9
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 1.8e-13 79.7 133 44.4
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 5.4e-13 78.2 162 42.6
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 1.2e-12 77.0 142 47.2
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 1.2e-12 77.0 137 48.2
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 1.6e-12 76.6 133 48.1
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 5.9e-12 74.7 146 43.8
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 2.3e-11 72.8 131 43.5
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 8.6e-11 70.9 104 51.0
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 1.9e-10 69.7 65 61.5
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 4.3e-10 68.6 141 42.6
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 5.6e-10 68.2 71 63.4
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 5.6e-10 68.2 140 42.9
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 9.5e-10 67.4 65 61.5
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 1.6e-09 66.6 128 44.5
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 3.6e-09 65.5 65 64.6
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 8.0e-09 64.3 133 43.6
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.4e-08 63.5 139 41.7
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 1.8e-08 63.2 139 41.0
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 1.8e-08 63.2 134 41.8
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 1.8e-08 63.2 137 40.9
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 2.3e-08 62.8 65 58.5
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 2.3e-08 62.8 65 58.5
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 3.1e-08 62.4 137 40.1
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 4.0e-08 62.0 139 41.0
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 5.2e-08 61.6 63 60.3
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 5.2e-08 61.6 143 39.2
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 6.8e-08 61.2 65 56.9
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 8.9e-08 60.8 139 41.0
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 8.9e-08 60.8 132 39.4
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 8.9e-08 60.8 139 40.3
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 8.9e-08 60.8 133 42.1
EL10As2g23175 Beta vulgaris HOM05D007617 ORTHO05D007195 1.2e-07 60.5 131 42.0
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 1.5e-07 60.1 133 42.1
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.5e-07 60.1 140 39.3
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 2.6e-07 59.3 113 42.5
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 2.6e-07 59.3 67 55.2
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 2.6e-07 59.3 134 41.8
Sc04g0009720 Simmondsia chinensis HOM05D007617 ORTHO05D007195 4.4e-07 58.5 68 57.4
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 5.8e-07 58.2 65 53.8
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 7.5e-07 57.8 137 40.1
Carub.0008s2391 Capsella rubella HOM05D010525 ORTHO05D007195 9.8e-07 57.4 73 53.4
BcaB01g00826 Brassica carinata HOM05D010525 ORTHO05D007195 1.3e-06 57.0 143 39.2
CARHR276990 Cardamine hirsuta HOM05D010525 ORTHO05D007195 1.7e-06 56.6 74 50.0
Rhsim08G0047600 Rhododendron simsii HOM05D007617 ORTHO05D007195 1.7e-06 56.6 134 38.8
AL5G27740 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 2.2e-06 56.2 142 38.7
AL8G40240 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 2.2e-06 56.2 74 54.1
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 2.2e-06 56.2 128 38.3
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 2.2e-06 56.2 142 40.8
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 2.2e-06 56.2 143 39.9
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 2.2e-06 56.2 72 51.4
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.9e-06 55.8 136 40.4
Aa31LG1G18820 Aethionema arabicum HOM05D010525 ORTHO05D007195 3.7e-06 55.5 139 40.3
A06p19360 Brassica napus HOM05D010525 ORTHO05D007195 3.7e-06 55.5 134 37.3
BraA06t25018Z Brassica rapa HOM05D010525 ORTHO05D007195 8.3e-06 54.3 136 37.5
Gohir.D07G059400 Gossypium hirsutum HOM05D011792 ORTHO05D007195 8.3e-06 54.3 68 57.4


User provided reference genes

Program Settings