Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.3e-179 632.9 299 100.0
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 9.3e-122 440.7 243 87.7
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 7.4e-111 404.4 298 66.1
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 8.5e-91 337.8 300 59.3
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.3e-87 325.9 299 58.2
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 3.3e-87 325.9 293 56.7
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 7.4e-87 324.7 280 60.0
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 1.2e-84 317.4 261 59.8
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.8e-80 303.5 301 53.5
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 2.2e-78 296.6 303 55.1
PGSC0003DMG400027349 Solanum tuberosum HOM05D007560 ORTHO05D005947 5.5e-74 282.0 302 50.3
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 2.6e-71 273.1 304 50.7
Solyc11g007650.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 1.8e-69 266.9 288 49.3
Solyc11g007620.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 4.5e-68 262.3 307 47.2
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 1.6e-60 237.3 210 57.1
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 1.7e-59 233.8 160 68.8
Nitab4.5_0009688g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.6e-57 227.3 181 62.4
Nitab4.5_0021475g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.6e-55 219.9 161 67.7
Solyc04g082080.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 1.2e-52 211.1 310 43.9
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 3.0e-48 196.4 195 49.7
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 4.7e-41 172.6 211 45.0
Nitab4.5_0000800g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.1e-41 172.2 136 62.5
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 5.2e-40 169.1 287 35.2
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 2.6e-39 166.8 294 34.0
Peaxi162Scf00738g00123 Petunia axillaris HOM05D007560 ORTHO05D005947 3.7e-38 162.9 181 48.6
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 2.7e-36 156.8 290 32.4
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.3e-35 153.7 264 35.6
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.3e-35 153.7 298 33.9
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 6.6e-35 152.1 264 34.8
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.2e-33 147.9 264 34.8
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.8e-33 146.7 284 32.7
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 5.2e-32 142.5 274 33.2
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.5e-31 141.0 285 30.5
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 2.0e-31 140.6 286 31.5
Peaxi162Scf00738g00112 Petunia axillaris HOM05D007560 ORTHO05D005947 2.0e-31 140.6 157 49.0
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 2.4e-29 133.7 288 30.9
Peaxi162Scf00738g00002 Petunia axillaris HOM05D007560 ORTHO05D005947 4.1e-29 132.9 166 45.2
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 2.1e-28 130.6 283 30.0
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 3.5e-28 129.8 297 31.6
Nitab4.5_0009688g0040 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.6e-27 125.6 159 47.8
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 1.1e-26 124.8 259 31.7
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.5e-26 123.6 267 31.1
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 9.5e-26 121.7 196 31.1
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.3e-24 117.1 261 30.3
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.1e-24 116.7 257 28.0
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 5.2e-24 115.9 253 31.2
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.8e-24 115.5 214 31.8
Nitab4.5_0000593g0030 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.2e-23 114.8 191 37.7
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 4.4e-23 112.8 209 33.5
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 4.4e-23 112.8 209 33.5
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 7.5e-23 112.1 209 33.5
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 9.9e-23 111.7 212 34.0
Eucgr.H04774 Eucalyptus grandis HOM05D007560 ORTHO05D005947 9.9e-23 111.7 255 30.6
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 4.9e-22 109.4 213 34.7
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 8.3e-22 108.6 211 33.2
Eucgr.H04773 Eucalyptus grandis HOM05D007560 ORTHO05D005947 2.4e-21 107.1 251 29.1
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.2e-21 106.7 269 28.6
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 7.1e-21 105.5 252 28.6
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 7.1e-21 105.5 252 28.6
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.2e-20 104.8 265 30.2
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.6e-20 104.4 201 34.8
Aqoxy7G01380 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.0e-20 102.4 261 29.1
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 6.0e-20 102.4 251 28.3
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 7.8e-20 102.1 256 30.1
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.3e-19 100.5 255 26.7
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.9e-19 99.8 205 28.8
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 6.6e-19 99.0 203 29.1
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.5e-18 97.8 269 29.0
Aqoxy5G01978 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.5e-18 97.1 170 30.6
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.5e-18 97.1 295 26.1
Aqoxy5G01909 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.3e-18 96.7 283 28.6
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.3e-18 96.3 274 28.8
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 5.6e-18 95.9 268 25.4
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.2e-17 94.7 290 25.2
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 1.2e-17 94.7 146 33.6
Nitab4.5_0009316g0030 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.1e-16 91.7 70 64.3
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.4e-16 90.5 246 26.4
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 5.2e-16 89.4 156 34.0
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 8.9e-16 88.6 280 24.6
Nitab4.5_0000464g0150 Nicotiana tabacum HOM05D007560 ORTHO05D005947 8.9e-16 88.6 75 57.3
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 7.6e-15 85.5 212 29.2
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.3e-14 84.7 167 31.1
Peaxi162Scf00528g00089 Petunia axillaris HOM05D007560 ORTHO05D005947 1.7e-14 84.3 64 62.5
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 2.9e-14 83.6 286 25.2
Lj6A626T22 Lonicera japonica HOM05D007560 ORTHO05D005947 6.4e-14 82.4 265 27.2
PSO339G4880 Papaver somniferum HOM05D008691 ORTHO05D005947 9.2e-13 78.6 266 28.9
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 6.0e-12 75.9 273 24.9
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.9e-11 73.2 170 24.7
Peaxi162Scf00212g00069 Petunia axillaris HOM05D007560 ORTHO05D005947 5.1e-11 72.8 57 63.2
PSO339G4378 Papaver somniferum HOM05D008691 ORTHO05D005947 6.6e-11 72.4 284 26.8
CAN.G1248.7 Capsicum annuum HOM05D015457 ORTHO05D020327 8.7e-11 72.0 271 22.9
PSO421G0214 Papaver somniferum HOM05D008691 ORTHO05D005947 1.1e-10 71.6 245 23.7
Hund19676 Selenicereus undatus HOM05D007560 ORTHO05D005947 1.1e-10 71.6 284 26.1
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.1e-10 71.6 241 25.7
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.6e-10 69.3 241 25.3
Thecc.04G272200 Theobroma cacao HOM05D000007 ORTHO05D000521 2.1e-09 67.4 257 22.6
SGA_v2.0_scaffold279G46810 Striga asiatica HOM05D031079 ORTHO05D005947 2.8e-09 67.0 203 25.6
Potri.011G037312 Populus trichocarpa HOM05D000007 ORTHO05D000521 4.8e-09 66.2 289 23.2
Aqoxy4G00563 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 6.2e-09 65.9 266 24.8
Aqoxy7G01104 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.2e-09 65.9 252 24.6
PSO478G1223 Papaver somniferum HOM05D008691 ORTHO05D005947 6.2e-09 65.9 194 27.8
COL.COLO4_13971 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.8e-08 64.3 257 23.0
SGA_v2.0_scaffold279G46801 Striga asiatica HOM05D031079 ORTHO05D005947 1.8e-08 64.3 195 25.6
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 3.1e-08 63.5 196 25.5
Potri.011G037200 Populus trichocarpa HOM05D000007 ORTHO05D000521 3.1e-08 63.5 201 24.9
Sabra16G0039400 Salix brachista HOM05D003814 ORTHO05D004399 4.0e-08 63.2 268 22.8
Atru.chr9.1609 Acer truncatum HOM05D003981 ORTHO05D003666 5.3e-08 62.8 181 26.5
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 5.3e-08 62.8 251 23.9
Aqoxy5G01433 Aquilegia oxysepala HOM05D007560 ORTHO05D005947 6.9e-08 62.4 142 29.6
Aqoxy2G03979 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 9.0e-08 62.0 146 30.1
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 9.0e-08 62.0 211 27.0
Haze_08061 Corylus avellana HOM05D000007 ORTHO05D000521 1.2e-07 61.6 265 24.5
PSO063G7584 Papaver somniferum HOM05D008691 ORTHO05D005947 1.2e-07 61.6 278 23.0
PSO407G0400 Papaver somniferum HOM05D008691 ORTHO05D005947 1.2e-07 61.6 242 22.3
Actinidia01719 Actinidia chinensis HOM05D007560 ORTHO05D005947 2.6e-07 60.5 71 40.8
Dinv01180 Davidia involucrata HOM05D000007 ORTHO05D000521 2.6e-07 60.5 211 27.5
Dinv26435 Davidia involucrata HOM05D000007 ORTHO05D000521 2.6e-07 60.5 211 27.5
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.6e-07 60.5 245 24.1
PSO170G2572 Papaver somniferum HOM05D008691 ORTHO05D005947 4.4e-07 59.7 263 23.2
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.4e-07 59.7 242 23.6
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 5.8e-07 59.3 181 26.5
Cfa012989 Carpinus fangiana HOM05D007726 ORTHO05D008819 5.8e-07 59.3 203 26.1
FvH4_1g04511 Fragaria vesca HOM05D000007 ORTHO05D005026 5.8e-07 59.3 197 25.9
Lj8A0T14 Lonicera japonica HOM05D000007 ORTHO05D000521 5.8e-07 59.3 209 24.9
PSO384G4726 Papaver somniferum HOM05D000007 ORTHO05D000017 5.8e-07 59.3 208 26.4
QL08p029175 Quercus lobata HOM05D000007 ORTHO05D000521 7.6e-07 58.9 253 23.3
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 7.6e-07 58.9 262 26.0
Os11g0131300 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 9.9e-07 58.5 240 24.2
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 9.9e-07 58.5 186 25.8
Haze_21347 Corylus avellana HOM05D007726 ORTHO05D008819 1.3e-06 58.2 203 25.1
Haze_21353 Corylus avellana HOM05D007726 ORTHO05D008819 1.3e-06 58.2 203 25.1
Lj8C594T5 Lonicera japonica HOM05D000007 ORTHO05D000521 1.3e-06 58.2 201 26.9
Sabra10G0173600 Salix brachista HOM05D001546 ORTHO05D004399 1.7e-06 57.8 229 24.5
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.7e-06 57.8 192 25.5
PSO170G2117 Papaver somniferum HOM05D008691 ORTHO05D005947 3.8e-06 56.6 243 22.2
PSO782G2823 Papaver somniferum HOM05D000007 ORTHO05D000017 3.8e-06 56.6 146 30.8
Potri.010G224400 Populus trichocarpa HOM05D003814 ORTHO05D004399 3.8e-06 56.6 203 25.1
Dinv18842 Davidia involucrata HOM05D000271 ORTHO05D000742 6.4e-06 55.8 258 24.8
Os12g0128000 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 6.4e-06 55.8 240 23.8
Peaxi162Scf00153g01029 Petunia axillaris HOM05D007560 ORTHO05D005947 6.4e-06 55.8 42 61.9


User provided reference genes

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