Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 7.3e-78 293.9 155 100.0
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 7.3e-46 187.6 100 97.0
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 4.3e-38 161.8 96 83.3
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 3.1e-36 155.6 100 79.0
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 3.4e-35 152.1 135 62.2
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 9.3e-33 144.1 101 67.3
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 7.9e-32 141.0 101 67.3
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.3e-31 139.4 101 65.3
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 3.9e-31 138.7 101 66.3
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 3.9e-31 138.7 93 74.2
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 3.9e-31 138.7 113 63.7
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 6.7e-31 137.9 98 67.3
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 1.5e-30 136.7 128 57.8
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 1.5e-30 136.7 97 68.0
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 1.9e-30 136.3 101 66.3
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.9e-30 136.3 96 66.7
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 1.9e-30 136.3 98 67.3
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 2.5e-30 136.0 96 66.7
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 4.3e-30 135.2 105 61.9
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 5.6e-30 134.8 101 65.3
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 7.4e-30 134.4 93 68.8
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 9.6e-30 134.0 96 64.6
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 9.6e-30 134.0 96 64.6
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 1.3e-29 133.7 96 65.6
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 1.6e-29 133.3 104 62.5
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 2.1e-29 132.9 101 62.4
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 2.1e-29 132.9 102 61.8
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.8e-29 132.5 95 65.3
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 3.7e-29 132.1 98 64.3
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 4.8e-29 131.7 101 62.4
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 4.8e-29 131.7 97 64.9
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 4.8e-29 131.7 102 62.7
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 6.2e-29 131.3 97 67.0
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 6.2e-29 131.3 98 62.2
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 8.1e-29 131.0 110 61.8
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 8.1e-29 131.0 101 63.4
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 1.1e-28 130.6 96 68.8
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.1e-28 130.6 97 64.9
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.4e-28 130.2 101 60.4
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.8e-28 129.8 101 61.4
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 1.8e-28 129.8 101 61.4
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 2.4e-28 129.4 100 63.0
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 2.4e-28 129.4 96 67.7
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 2.4e-28 129.4 98 63.3
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 3.1e-28 129.0 101 61.4
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 3.1e-28 129.0 96 63.5
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.1e-28 129.0 105 58.1
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 5.3e-28 128.3 104 59.6
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 6.9e-28 127.9 98 64.3
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 9.0e-28 127.5 101 60.4
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 9.0e-28 127.5 128 56.2
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 1.5e-27 126.7 101 60.4
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 1.5e-27 126.7 97 61.9
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.5e-27 126.7 105 61.0
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 1.5e-27 126.7 96 63.5
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.0e-27 126.3 98 63.3
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.0e-27 126.3 98 63.3
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 2.0e-27 126.3 92 69.6
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 2.0e-27 126.3 98 62.2
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 2.0e-27 126.3 96 62.5
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 2.6e-27 125.9 84 67.9
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 2.6e-27 125.9 100 64.0
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 2.6e-27 125.9 101 59.4
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 2.6e-27 125.9 101 60.4
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 3.4e-27 125.6 101 59.4
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 3.4e-27 125.6 101 59.4
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 3.4e-27 125.6 106 61.3
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 3.4e-27 125.6 98 60.2
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 3.4e-27 125.6 87 66.7
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 4.5e-27 125.2 101 59.4
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 4.5e-27 125.2 98 62.2
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 5.8e-27 124.8 99 60.6
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 5.8e-27 124.8 101 59.4
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 5.8e-27 124.8 101 58.4
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 5.8e-27 124.8 101 60.4
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 7.6e-27 124.4 92 62.0
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 7.6e-27 124.4 96 62.5
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 7.6e-27 124.4 96 61.5
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 7.6e-27 124.4 101 59.4
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 1.0e-26 124.0 94 62.8
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 1.0e-26 124.0 111 57.7
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 1.0e-26 124.0 98 61.2
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 1.3e-26 123.6 101 58.4
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.7e-26 123.2 101 58.4
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.7e-26 123.2 96 60.4
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 2.2e-26 122.9 98 60.2
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 2.2e-26 122.9 101 58.4
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 2.2e-26 122.9 98 61.2
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 2.9e-26 122.5 103 58.3
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 2.9e-26 122.5 96 61.5
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 2.9e-26 122.5 101 57.4
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 3.8e-26 122.1 99 58.6
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 6.5e-26 121.3 104 56.7
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 8.4e-26 120.9 101 58.4
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 8.4e-26 120.9 104 52.9
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 1.1e-25 120.6 101 58.4
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.1e-25 120.6 98 62.2
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.4e-25 120.2 106 59.4
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 1.4e-25 120.2 101 57.4
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 1.4e-25 120.2 101 57.4
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 1.4e-25 120.2 101 57.4
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 1.4e-25 120.2 101 57.4
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 1.4e-25 120.2 101 57.4
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.9e-25 119.8 104 52.9
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 3.2e-25 119.0 93 60.2
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 3.2e-25 119.0 98 58.2
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.1e-24 116.3 98 59.2
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 3.5e-24 115.5 101 57.4
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 3.5e-24 115.5 102 55.9
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 6.0e-24 114.8 102 55.9
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.0e-24 114.8 104 52.9
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 7.9e-24 114.4 102 55.9
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 7.9e-24 114.4 105 54.3
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 1.0e-23 114.0 111 55.9
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.8e-23 113.2 88 61.4
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 3.0e-23 112.5 123 50.4
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 8.7e-23 110.9 101 58.4
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 3.3e-22 109.0 98 50.0
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 4.3e-22 108.6 104 51.0
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 5.7e-22 108.2 90 55.6
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.3e-21 107.1 72 68.1
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 8.2e-21 104.4 90 53.3
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 4.0e-20 102.1 99 55.6
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 5.3e-20 101.7 75 65.3
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 2.6e-19 99.4 70 68.6
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 5.8e-19 98.2 75 64.0
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 6.5e-18 94.7 84 53.6
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.9e-17 93.2 56 78.6
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 4.2e-17 92.0 105 50.5
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.1e-16 89.7 100 42.0
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 4.6e-16 88.6 94 48.9
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 7.4e-14 81.3 60 63.3
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 8.2e-13 77.8 51 68.6
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.1e-12 77.4 80 46.2
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.0e-11 73.2 61 59.0
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 1.2e-08 63.9 56 53.6
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 2.1e-08 63.2 90 38.9


User provided reference genes

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