Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00324 Erythranthe guttata HOM05D001750 ORTHO05D001825 1.0e-82 310.1 163 100.0
CAN.G134.25 Capsicum annuum HOM05D001750 ORTHO05D001825 8.5e-45 184.1 108 87.0
Cfa005537 Carpinus fangiana HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
Cfa022996 Carpinus fangiana HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
Phvul.005G088400 Phaseolus vulgaris HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
SalBow1G5977 Salvia bowleyana HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
Solyc00g500098.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
Solyc00g500169.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
Solyc00g500271.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
Solyc00g500317.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
SGA_v2.0_scaffold245G44452 Striga asiatica HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
TPR.G28320 Trifolium pratense HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
unitig_87.g28030 Utricularia gibba HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
VMungo0329G0001 Vigna mungo HOM05D001750 ORTHO05D001825 1.5e-44 183.3 108 87.0
LjContig00315g0010666 Lotus japonicus HOM05D001750 ORTHO05D001825 3.2e-44 182.2 108 86.1
Lalb_Chr17g0337371 Lupinus albus HOM05D001750 ORTHO05D001825 3.2e-44 182.2 108 86.1
SabraMtG0002600 Salix brachista HOM05D001750 ORTHO05D001825 3.2e-44 182.2 108 86.1
Ah.10g027940 Amaranthus hybridus HOM05D001750 ORTHO05D001825 7.2e-44 181.0 108 86.1
Ah.10g028650 Amaranthus hybridus HOM05D001750 ORTHO05D001825 7.2e-44 181.0 108 86.1
AUR62042331 Chenopodium quinoa HOM05D001750 ORTHO05D001825 7.2e-44 181.0 108 86.1
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 7.2e-44 181.0 108 86.1
Sed0023702 Sechium edule HOM05D001750 ORTHO05D001825 7.2e-44 181.0 105 87.6
Lj2C1233T24 Lonicera japonica HOM05D001750 ORTHO05D001825 9.4e-44 180.6 108 86.1
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 1.2e-43 180.3 108 86.1
Hund27692 Selenicereus undatus HOM05D001750 ORTHO05D001825 1.2e-43 180.3 108 85.2
Hund29041 Selenicereus undatus HOM05D001750 ORTHO05D001825 1.2e-43 180.3 108 85.2
Hund31001 Selenicereus undatus HOM05D001750 ORTHO05D001825 1.2e-43 180.3 108 85.2
arahy.Tifrunner.gnm1.ann1.B33B9N Arachis hypogaea HOM05D001750 ORTHO05D001825 3.6e-43 178.7 108 84.3
FvH4_c1g00470 Fragaria vesca HOM05D001750 ORTHO05D001825 3.6e-43 178.7 105 86.7
FAN14G4205 Fragaria x ananassa HOM05D001750 ORTHO05D001825 3.6e-43 178.7 105 86.7
Glyma.15G187800 Glycine max HOM05D001750 ORTHO05D001825 3.6e-43 178.7 108 85.2
RcHm_v2.0_MTg0498221 Rosa chinensis HOM05D001750 ORTHO05D001825 3.6e-43 178.7 105 86.7
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 4.7e-43 178.3 108 85.2
Nn117s43413 Nelumbo nucifera HOM05D001750 ORTHO05D001825 4.7e-43 178.3 105 86.7
Nn1g10108 Nelumbo nucifera HOM05D001750 ORTHO05D001825 4.7e-43 178.3 105 86.7
Nn1g10194 Nelumbo nucifera HOM05D001750 ORTHO05D001825 4.7e-43 178.3 105 86.7
FAN14G0206 Fragaria x ananassa HOM05D001750 ORTHO05D001825 6.1e-43 177.9 108 84.3
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 6.1e-43 177.9 108 85.2
Glyma.15G187600 Glycine max HOM05D001750 ORTHO05D001825 1.0e-42 177.2 108 84.3
ATMG00513 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 1.8e-42 176.4 108 84.3
Cpa.g.sc900.3 Carica papaya HOM05D001750 ORTHO05D001825 2.3e-42 176.0 105 84.8
Zm00001eb384430 Zea mays HOM05D001750 ORTHO05D001825 2.3e-42 176.0 108 84.3
Zm00001eb384490 Zea mays HOM05D001750 ORTHO05D001825 2.3e-42 176.0 108 84.3
Zm00001eb437920 Zea mays HOM05D001750 ORTHO05D001825 2.3e-42 176.0 108 84.3
Zm00001eb438010 Zea mays HOM05D001750 ORTHO05D001825 2.3e-42 176.0 108 84.3
Zm00001eb439010 Zea mays HOM05D001750 ORTHO05D001825 2.3e-42 176.0 108 84.3
Zm00001eb440820 Zea mays HOM05D001750 ORTHO05D001825 2.3e-42 176.0 108 84.3
Zm00001eb442540 Zea mays HOM05D001750 ORTHO05D001825 2.3e-42 176.0 108 84.3
Migut.J01211 Erythranthe guttata HOM05D001750 ORTHO05D001825 8.8e-42 174.1 106 84.0
BolSC28t60406H Brassica oleracea HOM05D001750 ORTHO05D001825 1.2e-41 173.7 134 71.6
BolSC28t60420H Brassica oleracea HOM05D001750 ORTHO05D001825 1.2e-41 173.7 134 71.6
BraSC77t46633Z Brassica rapa HOM05D001750 ORTHO05D001825 1.2e-41 173.7 105 83.8
Sp3g25940 Schrenkiella parvula HOM05D001750 ORTHO05D001825 1.2e-41 173.7 105 83.8
Ah.02g118860 Amaranthus hybridus HOM05D001750 ORTHO05D001825 2.6e-41 172.6 108 83.3
Lj2A1235G104 Lonicera japonica HOM05D001750 ORTHO05D001825 2.6e-41 172.6 93 92.5
SHI48909 Sapria himalayana HOM05D001750 ORTHO05D001825 2.6e-41 172.6 108 79.6
Lalb_Chr02g0153721 Lupinus albus HOM05D001750 ORTHO05D001825 3.4e-41 172.2 108 82.4
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 3.4e-41 172.2 105 84.8
MBI06_g25391_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 4.4e-41 171.8 143 70.6
Aa31sc483G10 Aethionema arabicum HOM05D001750 ORTHO05D001825 9.7e-41 170.6 95 88.4
CDE02G3422 Ceratophyllum demersum HOM05D001750 ORTHO05D001825 1.7e-40 169.9 105 83.8
Nitab4.5_0000593g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.4e-39 166.8 108 81.5
Atru.chr9.151 Acer truncatum HOM05D001750 ORTHO05D001825 1.8e-39 166.4 94 89.4
PSO017G5352 Papaver somniferum HOM05D001750 ORTHO05D001825 4.1e-39 165.2 108 78.7
SHI35585 Sapria himalayana HOM05D001750 ORTHO05D001825 2.0e-38 162.9 132 64.4
Nitab4.5_0000172g0100 Nicotiana tabacum HOM05D001750 ORTHO05D001825 5.9e-38 161.4 91 85.7
Nitab4.5_0001152g0320 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.0e-37 160.6 91 87.9
SHI09895 Sapria himalayana HOM05D001750 ORTHO05D001825 2.5e-36 156.0 106 74.5
Nitab4.5_0001788g0240 Nicotiana tabacum HOM05D001750 ORTHO05D001825 9.4e-36 154.1 84 91.7
Potri.015G051300 Populus trichocarpa HOM05D001750 ORTHO05D001825 1.1e-31 140.6 84 84.5
Nn117s43418 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.9e-28 129.8 79 84.8
Nn1g10189 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.9e-28 129.8 79 84.8
Hund29121 Selenicereus undatus HOM05D001750 ORTHO05D001825 5.2e-26 121.7 72 86.1
Migut.F01235 Erythranthe guttata HOM05D001750 ORTHO05D001825 2.2e-24 116.3 62 91.9
SHI16092 Sapria himalayana HOM05D001750 ORTHO05D001825 3.2e-23 112.5 83 68.7
Hma1.2p1_1529F.1_g289140 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 9.2e-23 110.9 67 83.6
Nitab4.5_0000172g2270 Nicotiana tabacum HOM05D001750 ORTHO05D012795 5.9e-22 108.2 69 78.3
Hma1.2p1_1430F.1_g282940 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 1.3e-21 107.1 57 91.2
RhsimMtG0004100 Rhododendron simsii HOM05D001750 ORTHO05D001825 8.6e-21 104.4 63 84.1
CAN.G1159.8 Capsicum annuum HOM05D001750 ORTHO05D001825 1.1e-20 104.0 67 79.1
arahy.Tifrunner.gnm1.ann1.MYM2HE Arachis hypogaea HOM05D001750 ORTHO05D012795 7.3e-20 101.3 57 86.0
Nitab4.5_0000085g0160 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.8e-19 99.4 62 82.3
Solyc10g062020.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.8e-19 99.4 60 80.0
arahy.Tifrunner.gnm1.ann1.BE3YYP Arachis hypogaea HOM05D001750 ORTHO05D001825 3.6e-19 99.0 60 85.0
Hma1.2p1_0034F.1_g021420 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 3.6e-19 99.0 60 85.0
ECA234G2654 Erigeron canadensis HOM05D001750 ORTHO05D001825 1.4e-18 97.1 60 83.3
Gohir.A09G068300 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.8e-18 96.7 53 90.6
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 1.5e-17 93.6 111 44.1
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 9.8e-17 90.9 56 83.9
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 9.8e-17 90.9 56 83.9
Psat4g179120 Pisum sativum HOM05D001750 ORTHO05D030195 9.8e-17 90.9 56 83.9
SMO053G0013 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 6.4e-16 88.2 121 47.1
SHI29513 Sapria himalayana HOM05D001750 ORTHO05D001825 7.8e-14 81.3 50 78.0
SHI29525 Sapria himalayana HOM05D004017 ORTHO05D004612 2.3e-13 79.7 52 73.1
Actinidia34923 Actinidia chinensis HOM05D001750 ORTHO05D001825 5.0e-13 78.6 46 87.0
Haze_27121 Corylus avellana HOM05D001750 ORTHO05D001825 5.0e-13 78.6 108 38.0
CSS0000875 Camellia sinensis var. sinensis HOM05D001750 ORTHO05D001825 9.5e-12 74.3 41 87.8


User provided reference genes

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