Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.3e-110 402.1 191 100.0
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 3.0e-105 385.2 191 95.3
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 4.0e-86 321.6 191 80.1
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 9.9e-85 317.0 191 76.4
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 1.1e-80 303.5 191 74.3
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 2.8e-79 298.9 182 78.6
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 3.6e-79 298.5 184 73.9
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 4.7e-79 298.1 184 75.0
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 1.4e-78 296.6 180 73.9
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 8.9e-78 293.9 186 74.7
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 4.4e-77 291.6 191 69.6
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 4.4e-77 291.6 185 73.5
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 7.6e-77 290.8 191 70.2
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 1.7e-76 289.7 179 72.6
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 2.2e-76 289.3 173 75.1
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 2.9e-76 288.9 185 70.8
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 2.9e-76 288.9 183 71.6
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 2.9e-76 288.9 183 73.2
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 4.9e-76 288.1 184 70.1
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 1.1e-75 287.0 184 70.7
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 1.1e-75 287.0 163 76.7
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 1.1e-75 287.0 202 67.3
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 1.9e-75 286.2 194 70.6
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 4.2e-75 285.0 173 72.8
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 7.1e-75 284.3 182 70.9
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 7.1e-75 284.3 187 70.1
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 9.3e-75 283.9 183 71.0
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 9.3e-75 283.9 183 71.0
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 1.2e-74 283.5 184 70.1
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 1.2e-74 283.5 189 69.3
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 1.6e-74 283.1 185 69.7
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 2.1e-74 282.7 183 70.5
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 2.7e-74 282.3 161 79.5
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 4.6e-74 281.6 184 67.4
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 4.6e-74 281.6 192 67.2
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 6.0e-74 281.2 183 67.8
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 7.8e-74 280.8 164 77.4
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 7.8e-74 280.8 163 77.9
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 1.0e-73 280.4 175 71.4
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 1.3e-73 280.0 162 77.2
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 1.7e-73 279.6 175 72.0
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 1.7e-73 279.6 183 72.1
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 1.7e-73 279.6 176 70.5
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 2.3e-73 279.3 163 75.5
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 2.3e-73 279.3 184 70.7
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 2.3e-73 279.3 175 73.1
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 5.1e-73 278.1 182 69.8
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 6.6e-73 277.7 179 67.6
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 1.1e-72 276.9 183 66.7
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 1.1e-72 276.9 198 65.7
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 2.5e-72 275.8 164 76.2
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 3.3e-72 275.4 184 66.8
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 4.3e-72 275.0 189 65.1
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 4.3e-72 275.0 177 71.2
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 4.3e-72 275.0 184 69.6
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 7.3e-72 274.2 183 71.0
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 1.6e-71 273.1 180 69.4
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 2.8e-71 272.3 184 67.9
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 2.8e-71 272.3 191 66.0
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 4.8e-71 271.6 184 66.8
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 6.2e-71 271.2 172 70.3
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.1e-70 270.4 184 66.3
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.1e-70 270.4 184 66.3
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 1.1e-70 270.4 200 65.5
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 1.4e-70 270.0 189 65.1
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 2.4e-70 269.2 189 66.1
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 3.1e-70 268.9 191 65.4
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 4.0e-70 268.5 183 66.1
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 5.3e-70 268.1 165 75.2
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 5.3e-70 268.1 163 76.1
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 6.9e-70 267.7 183 66.7
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 2.0e-69 266.2 165 74.5
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 2.6e-69 265.8 189 68.3
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 3.4e-69 265.4 184 65.8
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 4.5e-69 265.0 191 66.5
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 5.8e-69 264.6 165 74.5
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 1.3e-68 263.5 165 71.5
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 1.7e-68 263.1 165 73.3
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 6.4e-68 261.2 165 73.3
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 6.4e-68 261.2 165 73.3
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 1.1e-67 260.4 164 73.2
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 3.2e-67 258.8 165 71.5
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 9.3e-67 257.3 164 70.7
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 1.2e-66 256.9 165 72.7
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 1.2e-66 256.9 164 75.0
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 4.6e-66 255.0 169 70.4
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 7.9e-66 254.2 166 72.3
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 7.9e-66 254.2 166 72.3
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 1.0e-65 253.8 186 66.1
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 3.0e-65 252.3 186 66.1
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 3.0e-65 252.3 186 66.1
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 3.9e-65 251.9 186 65.6
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 3.9e-65 251.9 162 71.0
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 5.1e-65 251.5 186 65.6
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 5.1e-65 251.5 141 76.6
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 9.6e-64 247.3 269 49.8
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 9.6e-64 247.3 172 66.3
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 2.8e-63 245.7 188 62.2
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 9.0e-62 240.7 172 64.0
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.2e-61 240.4 232 54.7
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 1.5e-61 240.0 178 64.0
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 5.8e-61 238.0 149 71.1
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 7.6e-61 237.7 193 56.5
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 3.2e-59 232.3 148 70.3
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 3.2e-59 232.3 185 61.1
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 9.3e-59 230.7 145 73.1
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 6.0e-58 228.0 134 75.4
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 1.8e-57 226.5 151 69.5
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 5.1e-57 224.9 250 50.8
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.7e-52 209.9 152 64.5
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 5.1e-49 198.4 150 62.0
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 3.7e-47 192.2 150 56.7
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 8.2e-47 191.0 147 57.1
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 1.1e-46 190.7 169 55.0
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 3.4e-45 185.7 125 65.6
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 1.3e-44 183.7 133 64.7
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 1.1e-43 180.6 137 62.0
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 3.2e-43 179.1 125 63.2
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 9.3e-43 177.6 105 72.4
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.1e-42 176.4 106 71.7
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 1.3e-41 173.7 111 69.4
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 3.3e-40 169.1 104 68.3
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 5.3e-38 161.8 106 67.0
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 1.0e-36 157.5 127 59.8
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.3e-36 157.1 91 74.7
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 3.2e-35 152.5 110 67.3
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 1.4e-33 147.1 164 47.0
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 1.4e-33 147.1 115 56.5
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.4e-33 147.1 226 37.6
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 5.3e-30 135.2 92 64.1
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 8.5e-28 127.9 85 68.2
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 7.0e-22 108.2 83 65.1
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 5.0e-20 102.1 98 52.0
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.7e-18 96.3 184 36.4
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 1.3e-15 87.4 164 35.4
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 1.6e-13 80.5 45 77.8


User provided reference genes

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