Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N01845 Erythranthe guttata HOM05D006097 ORTHO05D008538 0.0e+00 1180.2 587 100.0
SGA_v2.0_scaffold232G43504 Striga asiatica HOM05D006097 ORTHO05D008538 3.6e-279 964.5 587 79.7
SalBow6G4726 Salvia bowleyana HOM05D006097 ORTHO05D008538 4.9e-260 901.0 621 72.5
Dinv22036 Davidia involucrata HOM05D006097 ORTHO05D008538 1.8e-249 865.9 575 73.7
Peaxi162Scf00767g00518 Petunia axillaris HOM05D006097 ORTHO05D008538 1.1e-246 856.7 543 75.0
Nitab4.5_0001621g0010 Nicotiana tabacum HOM05D006097 ORTHO05D008538 1.7e-244 849.4 581 71.3
Actinidia21518 Actinidia chinensis HOM05D006097 ORTHO05D008538 1.4e-243 846.3 576 70.5
Sopen08g005450 Solanum pennellii HOM05D006097 ORTHO05D008538 7.9e-242 840.5 585 70.4
CAN.G176.2 Capsicum annuum HOM05D006097 ORTHO05D008538 1.6e-239 832.8 586 69.5
Prupe.2G036100 Prunus persica HOM05D006097 ORTHO05D008538 2.1e-239 832.4 579 69.8
MD07G1040200 Malus domestica HOM05D006097 ORTHO05D008538 4.1e-238 828.2 577 69.5
QL04p017855 Quercus lobata HOM05D006097 ORTHO05D008538 5.3e-238 827.8 585 69.2
Haze_03039 Corylus avellana HOM05D006097 ORTHO05D008538 1.3e-236 823.2 579 68.4
GSVIVG01013488001 Vitis vinifera HOM05D006097 ORTHO05D008538 2.9e-236 822.0 582 69.4
HanXRQChr04g0113861 Helianthus annuus HOM05D006097 ORTHO05D008538 1.9e-235 819.3 535 71.6
CiPaw.14G007600 Carya illinoinensis HOM05D006097 ORTHO05D008538 6.1e-234 814.3 579 68.2
COL.COLO4_20657 Corchorus olitorius HOM05D006097 ORTHO05D008538 7.9e-234 813.9 584 67.3
Potri.003G196300 Populus trichocarpa HOM05D006097 ORTHO05D008538 2.3e-233 812.4 580 69.0
Ciclev10004623m.g Citrus clementina HOM05D006097 ORTHO05D008538 6.7e-233 810.8 572 68.4
Manes.04G159300 Manihot esculenta HOM05D006097 ORTHO05D008538 1.1e-232 810.1 587 68.3
Cfa010917 Carpinus fangiana HOM05D006097 ORTHO05D008538 1.5e-232 809.7 608 66.3
ECA236G3136 Erigeron canadensis HOM05D006097 ORTHO05D008538 1.3e-231 806.6 534 70.0
PSO339G1331 Papaver somniferum HOM05D006097 ORTHO05D008538 1.3e-231 806.6 579 67.9
Cc02_g30220 Coffea canephora HOM05D006097 ORTHO05D008538 4.8e-231 804.7 584 67.8
RcHm_v2.0_Chr1g0324291 Rosa chinensis HOM05D006097 ORTHO05D008538 1.0e-228 797.0 582 66.8
Atru.chr7.628 Acer truncatum HOM05D006097 ORTHO05D008538 1.3e-228 796.6 573 67.7
Gohir.D06G184900 Gossypium hirsutum HOM05D006097 ORTHO05D008538 1.7e-228 796.2 559 68.2
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 5.0e-228 794.7 535 70.7
Gorai.010G216200 Gossypium raimondii HOM05D006097 ORTHO05D008538 8.5e-228 793.9 561 68.1
Thecc.10G154600 Theobroma cacao HOM05D006097 ORTHO05D008538 2.1e-226 789.3 584 65.2
FAN01G0546 Fragaria x ananassa HOM05D006097 ORTHO05D008538 6.1e-226 787.7 577 66.0
Gohir.A06G175000 Gossypium hirsutum HOM05D006097 ORTHO05D008538 7.9e-226 787.3 579 65.8
Sabra03G0146400 Salix brachista HOM05D006097 ORTHO05D008538 7.9e-226 787.3 622 63.8
Nn2g14836 Nelumbo nucifera HOM05D006097 ORTHO05D008538 1.4e-225 786.6 576 67.0
Duzib114G0946 Durio zibethinus HOM05D006097 ORTHO05D008538 1.1e-224 783.5 580 65.2
CANSAT56G2143 Cannabis sativa HOM05D006097 ORTHO05D008538 2.4e-222 775.8 534 68.0
PGR031G1965 Punica granatum HOM05D006097 ORTHO05D008538 6.9e-222 774.2 571 66.7
THA.LOC104826726 Tarenaya hassleriana HOM05D006097 ORTHO05D008538 1.2e-221 773.5 579 64.4
Hund13358 Selenicereus undatus HOM05D006097 ORTHO05D008538 7.7e-221 770.8 582 64.9
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 1.3e-220 770.0 572 65.0
Ah.12g062830 Amaranthus hybridus HOM05D006097 ORTHO05D008538 8.5e-220 767.3 577 63.3
AUR62032650 Chenopodium quinoa HOM05D006097 ORTHO05D008538 1.2e-218 763.5 582 62.5
CSS0004732 Camellia sinensis var. sinensis HOM05D006097 ORTHO05D008538 2.7e-218 762.3 574 66.0
Lj3g0013868 Lotus japonicus HOM05D006097 ORTHO05D008538 3.6e-218 761.9 574 65.3
Psat5g221440 Pisum sativum HOM05D006097 ORTHO05D008538 7.9e-218 760.8 575 64.2
Medtr3g014750 Medicago truncatula HOM05D006097 ORTHO05D008538 6.7e-217 757.7 579 64.1
TPR.G17806 Trifolium pratense HOM05D006097 ORTHO05D008538 6.7e-217 757.7 581 64.0
BraA04t16135Z Brassica rapa HOM05D006097 ORTHO05D008538 9.7e-216 753.8 579 62.2
Lalb_Chr19g0132421 Lupinus albus HOM05D006097 ORTHO05D008538 1.7e-215 753.1 578 63.5
A04p04190 Brassica napus HOM05D006097 ORTHO05D008538 5.3e-214 748.0 579 62.2
C04p36530 Brassica napus HOM05D006097 ORTHO05D008538 7.0e-214 747.7 579 61.7
BcaC02g09793 Brassica carinata HOM05D006097 ORTHO05D008538 1.0e-212 743.8 579 61.3
BcaB02g08396 Brassica carinata HOM05D006097 ORTHO05D008538 1.7e-212 743.0 579 61.5
Aqoxy2G00367 Aquilegia oxysepala HOM05D006097 ORTHO05D008538 3.8e-212 741.9 512 68.6
Glyma.13G197200 Glycine max HOM05D006097 ORTHO05D008538 8.5e-212 740.7 549 64.7
Sp5g06630 Schrenkiella parvula HOM05D006097 ORTHO05D008538 8.5e-212 740.7 579 61.0
PGSC0003DMG400025223 Solanum tuberosum HOM05D006097 ORTHO05D008538 1.1e-211 740.3 463 75.8
Thhalv10010237m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 3.2e-211 738.8 583 61.6
BolC4t25143H Brassica oleracea HOM05D006097 ORTHO05D008538 1.6e-210 736.5 597 59.8
Aa31LG10G10820 Aethionema arabicum HOM05D006097 ORTHO05D008538 4.7e-210 734.9 586 61.1
AUR62026861 Chenopodium quinoa HOM05D006097 ORTHO05D008538 1.0e-209 733.8 582 60.7
Hma1.2p1_1627F.1_g294440 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 1.4e-209 733.4 462 76.0
ATR0745G019 Amborella trichopoda HOM05D006097 ORTHO05D008538 8.8e-209 730.7 536 64.4
Carub.0005s2263 Capsella rubella HOM05D006097 ORTHO05D008538 1.1e-208 730.3 583 60.5
Solyc08g014470.4 Solanum lycopersicum HOM05D006097 ORTHO05D008538 4.4e-208 728.4 463 75.2
AL5G37140 Arabidopsis lyrata HOM05D006097 ORTHO05D008538 1.3e-207 726.9 579 60.8
EL10Ac2g02801 Beta vulgaris HOM05D006097 ORTHO05D008538 1.4e-206 723.4 660 54.8
CsaV3_5G036770 Cucumis sativus L. HOM05D006097 ORTHO05D008538 1.8e-206 723.0 535 63.6
arahy.Tifrunner.gnm1.ann1.HF4B4K Arachis hypogaea HOM05D006097 ORTHO05D008538 1.5e-203 713.4 629 57.2
Eucgr.G03235 Eucalyptus grandis HOM05D006097 ORTHO05D008538 9.4e-203 710.7 571 61.6
CARHR165960 Cardamine hirsuta HOM05D006097 ORTHO05D008538 8.0e-202 707.6 569 60.8
HPP92_013975 Vanilla planifolia HOM05D006097 ORTHO05D008538 1.0e-201 707.2 576 59.2
Os01g0952700 Oryza sativa ssp. japonica HOM05D006097 ORTHO05D008538 8.3e-199 697.6 568 58.8
ClCG05G026810 Citrullus lanatus HOM05D006097 ORTHO05D008538 2.1e-194 682.9 550 61.1
DCAR_031244 Daucus carota HOM05D006097 ORTHO05D008538 4.0e-193 678.7 464 70.0
SEGI_19069 Sequoiadendron giganteum HOM05D006097 ORTHO05D008538 8.3e-191 671.0 539 59.4
Hma1.2p1_1627F.1_g294450 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 4.2e-187 658.7 462 70.1
unitig_52.g17390 Utricularia gibba HOM05D006097 ORTHO05D008538 5.6e-187 658.3 513 65.7
Sc07g0002170 Simmondsia chinensis HOM05D006097 ORTHO05D008538 7.2e-187 657.9 464 65.9
Phvul.011G206500 Phaseolus vulgaris HOM05D006097 ORTHO05D008538 1.0e-185 654.1 495 65.1
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 4.0e-185 652.1 540 61.7
arahy.Tifrunner.gnm1.ann1.RMFD7W Arachis hypogaea HOM05D006097 ORTHO05D008538 2.2e-175 619.8 617 53.5
MBI19_g07612_MAGBIO Magnolia biondii HOM05D006097 ORTHO05D008538 3.6e-170 602.4 531 58.6
QL04p017846 Quercus lobata HOM05D006097 ORTHO05D008538 8.3e-167 591.3 395 71.6
AT3G55850 Arabidopsis thaliana HOM05D006097 ORTHO05D008538 1.9e-166 590.1 458 62.9
MELO3C012474.2 Cucumis melo HOM05D006097 ORTHO05D008538 4.1e-166 589.0 426 66.0
Mapoly0021s0162 Marchantia polymorpha HOM05D006097 ORTHO05D008538 1.8e-161 573.5 542 52.0
Sed0002543 Sechium edule HOM05D006097 ORTHO05D008538 1.0e-156 557.8 549 53.4
SMO367G1089 Selaginella moellendorffii HOM05D006097 ORTHO05D008538 1.5e-155 553.9 574 49.3
TAR623G0406 Trochodendron aralioides HOM05D006097 ORTHO05D008538 1.1e-153 547.7 349 73.9
Oeu048573.1 Olea europaea HOM05D006097 ORTHO05D008538 4.0e-153 545.8 366 73.8
Pp3c20_1490 Physcomitrium patens HOM05D006097 ORTHO05D008538 1.1e-150 537.7 540 50.4
AagrBONN_evm.TU.Sc2ySwM_340.253 Anthoceros agrestis HOM05D006097 ORTHO05D008538 4.2e-150 535.8 532 50.0
AUR62037188 Chenopodium quinoa HOM05D006097 ORTHO05D008538 1.6e-146 523.9 398 62.8
Glyma.15G235400 Glycine max HOM05D006097 ORTHO05D008538 7.4e-131 471.9 479 51.1
CDE06G1230 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 4.8e-122 442.6 354 60.5
Ca_26912_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 1.1e-118 431.4 296 67.6
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 1.3e-114 417.9 534 43.3
vmacro12697 Vaccinium macrocarpon HOM05D006097 ORTHO05D008538 1.0e-111 408.3 266 71.8
Lj9A654G51 Lonicera japonica HOM05D006097 ORTHO05D008538 6.9e-105 385.6 238 76.1
Thhalv10010899m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 1.5e-104 384.4 313 59.4
VMungo1127G1698 Vigna mungo HOM05D006097 ORTHO05D008538 2.7e-101 373.6 269 66.9
FAN10G0529 Fragaria x ananassa HOM05D006097 ORTHO05D008538 1.0e-95 355.1 702 36.0
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 4.7e-93 346.3 550 40.9
MCO06G284 Micromonas commoda HOM05D006097 ORTHO05D008538 1.3e-90 338.2 583 37.7
Zm00001eb140700 Zea mays HOM05D006097 ORTHO05D008538 2.8e-82 310.5 248 59.3
Cre06.g279350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 1.8e-76 291.2 453 38.6
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 9.5e-70 268.9 491 36.0
TAR623G0702 Trochodendron aralioides HOM05D006097 ORTHO05D008538 8.3e-66 255.8 208 62.0
VMungo1127G1548 Vigna mungo HOM05D006097 ORTHO05D008538 5.6e-62 243.0 176 64.8
Lj9A654T55 Lonicera japonica HOM05D006097 ORTHO05D008538 8.9e-60 235.7 141 77.3
Pp3s32_630 Physcomitrium patens HOM05D006097 ORTHO05D008538 4.6e-56 223.4 530 30.2
Cre07.g313350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 7.8e-56 222.6 534 30.1
PRCOL_00006109 Prasinoderma coloniale HOM05D006097 ORTHO05D008538 8.6e-55 219.2 404 37.1
QL04p017840 Quercus lobata HOM05D006097 ORTHO05D008538 6.2e-45 186.4 123 67.5
Ca_03883_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 4.0e-28 130.6 95 62.1
CDE06G0927 Ceratophyllum demersum HOM05D006097 ORTHO05D020391 6.9e-28 129.8 147 47.6
Nn2g16009 Nelumbo nucifera HOM05D006097 ORTHO05D008538 6.4e-26 123.2 89 64.0
DCAR_031243 Daucus carota HOM05D006097 ORTHO05D020391 5.1e-23 113.6 121 54.5
Medtr1224s0010 Medicago truncatula HOM05D006097 ORTHO05D008538 5.1e-23 113.6 503 25.0
SMO197G0087 Selaginella moellendorffii HOM05D003320 ORTHO05D003941 8.7e-23 112.8 169 43.8
CDE06G2151 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 1.6e-21 108.6 82 63.4
SMO274G0019 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 6.2e-21 106.7 117 49.6
SEGI_33421 Sequoiadendron giganteum HOM05D006097 ORTHO05D020391 3.4e-19 100.9 79 60.8
SMO125G0001 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 7.6e-19 99.8 156 41.0
SMO212G0005 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 1.3e-18 99.0 115 47.0
SMO009G0029 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 3.8e-18 97.4 120 45.0
SMO005G0015 Selaginella moellendorffii HOM05D006097 ORTHO05D011308 6.4e-18 96.7 105 46.7
Carub.0002s2671 Capsella rubella HOM05D006097 ORTHO05D008538 3.2e-17 94.4 52 73.1
RcHm_v2.0_Chr6g0254811 Rosa chinensis HOM05D006097 ORTHO05D020391 1.3e-13 82.4 56 64.3
CDE06G1678 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 2.2e-10 71.6 55 61.8
Nn313s46297 Nelumbo nucifera HOM05D006097 ORTHO05D008538 1.8e-07 62.0 46 67.4
Hma1.2p1_0269F.1_g107740 Hydrangea macrophylla HOM05D006097 ORTHO05D020391 3.0e-07 61.2 38 71.1
Hma1.2p1_3244F.1_g334325 Hydrangea macrophylla HOM05D006097 ORTHO05D020391 3.0e-07 61.2 38 71.1
BolC8t50740H Brassica oleracea HOM05D035890 ORTHO05D033370 3.9e-07 60.8 47 59.6
Haze_01792 Corylus avellana HOM05D000242 ORTHO05D000700 4.3e-06 57.4 35 71.4


User provided reference genes

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