Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 2.4e-176 622.1 321 100.0
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 1.5e-170 602.8 321 97.8
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 2.9e-145 518.8 313 82.7
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 4.2e-144 515.0 313 81.8
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 1.0e-142 510.4 311 83.3
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 2.4e-139 499.2 312 79.2
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 3.8e-137 491.9 313 77.0
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 1.6e-135 486.5 313 74.8
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 3.5e-135 485.3 311 77.8
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 6.6e-134 481.1 315 76.5
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 1.1e-133 480.3 312 73.7
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 1.1e-133 480.3 315 76.5
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 2.5e-133 479.2 315 76.5
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 3.3e-133 478.8 312 73.7
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 7.3e-133 477.6 313 75.4
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 9.6e-133 477.2 313 74.8
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 3.6e-132 475.3 315 74.9
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 6.2e-132 474.6 311 75.9
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 2.4e-131 472.6 313 74.4
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 5.3e-131 471.5 313 73.5
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 5.3e-131 471.5 340 71.2
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 9.0e-131 470.7 313 75.1
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 2.9e-129 465.7 313 72.5
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 4.9e-129 464.9 313 72.8
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 8.4e-129 464.2 313 72.2
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 2.4e-128 462.6 293 77.5
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 4.2e-128 461.8 313 71.2
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 5.4e-128 461.5 311 74.0
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 5.4e-128 461.5 313 71.9
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 1.6e-127 459.9 312 71.2
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 2.1e-127 459.5 313 71.9
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 2.1e-127 459.5 299 73.6
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 3.5e-127 458.8 311 71.7
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 3.5e-127 458.8 313 73.5
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 1.0e-126 457.2 313 71.2
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 1.8e-126 456.4 313 72.2
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 1.8e-126 456.4 313 70.0
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 3.0e-126 455.7 313 70.9
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 3.0e-126 455.7 313 72.2
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 3.0e-126 455.7 291 76.6
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 3.9e-126 455.3 303 74.6
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.5e-125 453.4 313 71.6
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 1.5e-125 453.4 318 72.0
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 1.9e-125 453.0 312 70.8
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 2.5e-125 452.6 313 70.9
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 4.3e-125 451.8 313 71.2
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 7.4e-125 451.1 313 70.0
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 9.6e-125 450.7 313 72.2
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 9.6e-125 450.7 313 70.3
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 1.6e-124 449.9 312 71.2
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 2.8e-124 449.1 313 71.2
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 2.8e-124 449.1 313 70.9
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 2.8e-124 449.1 313 70.3
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 3.7e-124 448.7 313 70.9
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 4.8e-124 448.4 315 69.2
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 6.2e-124 448.0 313 69.6
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 8.1e-124 447.6 313 70.6
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 8.1e-124 447.6 313 69.0
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 1.4e-123 446.8 313 70.0
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 4.0e-123 445.3 313 68.1
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 4.0e-123 445.3 314 70.7
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 5.3e-123 444.9 286 76.2
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 2.0e-122 443.0 313 70.3
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 3.4e-122 442.2 311 70.4
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 4.9e-121 438.3 301 71.4
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 6.4e-121 438.0 311 70.7
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 8.4e-121 437.6 311 70.4
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.1e-120 437.2 317 68.8
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.4e-120 436.8 317 68.5
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 2.5e-120 436.0 313 68.7
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 3.2e-120 435.6 301 71.1
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 4.2e-120 435.3 313 71.6
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 2.7e-119 432.6 309 68.0
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 4.6e-119 431.8 308 70.5
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 1.1e-117 427.2 313 68.1
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 1.5e-117 426.8 313 66.8
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 1.5e-117 426.8 291 70.4
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 1.9e-117 426.4 340 63.8
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 1.6e-116 423.3 313 68.4
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 3.7e-116 422.2 315 65.1
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 4.8e-116 421.8 313 65.8
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 1.4e-115 420.2 315 65.1
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 1.4e-115 420.2 293 66.9
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 1.8e-115 419.9 311 66.6
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 1.8e-115 419.9 326 65.3
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.8e-115 419.9 326 65.3
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.8e-115 419.9 326 65.3
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 6.9e-115 417.9 312 65.7
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 2.6e-114 416.0 299 67.2
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.7e-113 413.3 326 64.1
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 6.5e-113 411.4 308 64.9
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 6.5e-113 411.4 336 63.4
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 8.4e-113 411.0 313 63.9
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 8.4e-113 411.0 313 64.5
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 8.4e-113 411.0 313 64.5
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 8.4e-113 411.0 313 64.5
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 1.1e-112 410.6 313 64.5
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 1.4e-112 410.2 313 64.2
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 3.2e-112 409.1 313 63.9
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 3.2e-112 409.1 313 65.2
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 7.1e-112 407.9 312 64.7
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 1.6e-111 406.8 326 63.2
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 4.6e-111 405.2 315 65.1
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 6.0e-111 404.8 313 64.5
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 6.0e-111 404.8 320 62.5
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 2.3e-110 402.9 299 65.6
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 3.9e-110 402.1 299 65.2
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 3.9e-110 402.1 299 65.2
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 5.1e-110 401.7 299 65.2
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 1.9e-109 399.8 317 61.2
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.8e-107 393.3 292 66.1
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 2.6e-106 389.4 300 63.3
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 2.2e-105 386.3 314 62.7
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 2.9e-105 386.0 314 62.7
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 8.5e-105 384.4 268 66.8
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 1.2e-103 380.6 257 70.8
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.4e-102 377.1 253 71.5
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 9.7e-101 370.9 326 61.0
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 2.8e-100 369.4 313 62.9
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 7.7e-98 361.3 313 62.3
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 5.3e-91 338.6 222 74.3
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 7.0e-91 338.2 296 56.1
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 8.5e-89 331.3 318 53.5
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 2.7e-87 326.2 299 55.5
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 1.0e-86 324.3 233 67.0
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 5.7e-85 318.5 222 68.5
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 1.0e-78 297.7 307 51.1
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 4.0e-78 295.8 313 49.5
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 1.8e-75 287.0 276 54.7
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 2.7e-74 283.1 294 51.7
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 8.8e-70 268.1 230 64.3
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 4.4e-69 265.8 292 48.6
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 6.6e-65 251.9 297 48.1
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 1.6e-50 204.1 185 60.0
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 1.2e-45 188.0 293 37.2
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 4.1e-35 152.9 106 67.0
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 1.7e-28 131.0 93 69.9
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 8.4e-28 128.6 90 74.4
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 2.4e-27 127.1 94 67.0
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 2.8e-23 113.6 79 72.2
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 2.7e-18 97.1 114 50.0
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 6.9e-14 82.4 90 51.1
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 6.9e-14 82.4 90 51.1
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 2.6e-13 80.5 98 51.0
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 7.9e-10 68.9 90 44.4


User provided reference genes

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