Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 6.2e-67 257.3 127 100.0
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 4.6e-62 241.1 127 91.3
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 3.0e-61 238.4 127 90.6
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.8e-59 231.9 127 86.6
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 3.6e-59 231.5 126 86.5
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 3.6e-59 231.5 127 86.6
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 4.7e-59 231.1 125 87.2
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 4.7e-59 231.1 127 87.4
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 8.1e-59 230.3 127 85.0
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 1.1e-58 229.9 127 86.6
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.4e-58 229.6 127 85.0
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 1.8e-58 229.2 127 85.0
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 1.8e-58 229.2 127 85.0
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 4.0e-58 228.0 123 85.4
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 5.2e-58 227.6 127 84.3
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 8.9e-58 226.9 125 84.0
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 8.9e-58 226.9 127 83.5
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 1.2e-57 226.5 126 84.1
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 1.2e-57 226.5 123 86.2
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.5e-57 226.1 127 83.5
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 1.5e-57 226.1 127 83.5
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 84.0
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 2.0e-57 225.7 127 83.5
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 2.0e-57 225.7 127 82.7
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 2.6e-57 225.3 126 81.7
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 81.6
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 85.6
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 84.8
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 81.6
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 82.7
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 3.4e-57 224.9 127 83.5
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 4.4e-57 224.6 126 84.1
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 4.4e-57 224.6 125 84.8
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 4.4e-57 224.6 127 83.5
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 4.4e-57 224.6 123 84.6
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 4.4e-57 224.6 127 83.5
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 5.8e-57 224.2 126 84.9
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 7.6e-57 223.8 127 82.7
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 9.9e-57 223.4 125 84.0
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 9.9e-57 223.4 125 84.0
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.3e-56 223.0 127 83.5
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 1.3e-56 223.0 126 83.3
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 1.3e-56 223.0 127 84.3
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 1.3e-56 223.0 127 83.5
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.7e-56 222.6 127 83.5
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 83.3
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 83.3
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 83.3
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 82.5
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 1.7e-56 222.6 127 80.3
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 83.3
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.7e-56 222.6 127 82.7
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 2.2e-56 222.2 123 85.4
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 2.2e-56 222.2 127 80.3
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 2.9e-56 221.9 125 83.2
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 2.9e-56 221.9 127 82.7
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.8e-56 221.5 125 81.6
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.8e-56 221.5 125 80.8
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 3.8e-56 221.5 123 84.6
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 4.9e-56 221.1 126 82.5
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 4.9e-56 221.1 128 83.6
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 82.7
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 82.7
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 82.7
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 82.7
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 82.7
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 81.9
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 4.9e-56 221.1 125 80.8
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 80.3
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 4.9e-56 221.1 125 79.2
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.9e-56 221.1 127 80.3
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 6.4e-56 220.7 125 80.0
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 1.1e-55 219.9 126 78.6
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.4e-55 219.5 125 80.0
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.9e-55 219.2 121 85.1
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.9e-55 219.2 121 85.1
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.9e-55 219.2 125 79.2
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 1.9e-55 219.2 125 83.2
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 1.9e-55 219.2 123 81.3
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 3.2e-55 218.4 126 78.6
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.1e-55 218.0 127 79.5
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 5.4e-55 217.6 128 78.1
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 5.4e-55 217.6 125 81.6
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 7.1e-55 217.2 127 81.1
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 7.1e-55 217.2 127 80.3
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 7.1e-55 217.2 123 80.5
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 80.5
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 9.2e-55 216.9 125 78.4
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 1.2e-54 216.5 122 79.5
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.7e-54 215.3 123 80.5
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 3.5e-54 214.9 127 78.7
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.5e-54 214.9 123 79.7
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 3.5e-54 214.9 126 81.0
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 7.8e-54 213.8 125 80.0
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 1.3e-53 213.0 123 79.7
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 1.3e-53 213.0 123 79.7
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 1.7e-53 212.6 123 78.9
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 1.7e-53 212.6 123 79.7
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 1.7e-53 212.6 126 77.8
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 3.0e-53 211.8 126 77.8
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 5.1e-53 211.1 127 77.2
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 6.6e-53 210.7 121 81.0
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 6.6e-53 210.7 115 85.2
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 6.6e-53 210.7 125 76.8
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 8.7e-53 210.3 126 77.0
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 1.1e-52 209.9 128 79.7
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 1.9e-52 209.1 126 77.0
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 2.5e-52 208.8 123 79.7
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 2.5e-52 208.8 123 78.0
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 3.3e-52 208.4 123 79.7
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 3.3e-52 208.4 123 78.9
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 3.3e-52 208.4 126 74.6
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 4.3e-52 208.0 123 78.9
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 9.6e-52 206.8 126 76.2
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 2.8e-51 205.3 123 75.6
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 2.8e-51 205.3 125 77.6
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 3.6e-51 204.9 123 78.0
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 4.7e-51 204.5 123 74.8
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 4.7e-51 204.5 115 80.0
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 6.2e-51 204.1 123 77.2
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 1.1e-50 203.4 123 74.8
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 2.9e-48 195.3 112 81.2
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 2.9e-48 195.3 115 80.0
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 2.9e-48 195.3 125 74.4
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 3.8e-48 194.9 118 76.3
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.8e-48 194.9 107 85.0
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 6.4e-48 194.1 107 85.0
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 6.4e-48 194.1 110 83.6
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 1.4e-47 193.0 126 73.0
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 3.2e-47 191.8 112 78.6
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 5.4e-47 191.0 112 79.5
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 1.2e-46 189.9 134 73.1
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.7e-46 188.7 110 80.9
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 2.3e-45 185.7 103 81.6
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 1.9e-44 182.6 124 66.9
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 1.6e-43 179.5 101 84.2
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 6.2e-43 177.6 100 81.0
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 6.2e-43 177.6 124 68.5
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.1e-42 176.8 100 80.0
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.8e-42 176.0 93 87.1
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 1.1e-39 166.8 102 80.4
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 4.2e-39 164.9 120 64.2
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 1.6e-38 162.9 88 83.0
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.0e-37 160.2 124 60.5
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.8e-37 159.5 98 78.6
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 3.9e-37 158.3 127 59.1
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 1.6e-35 152.9 102 71.6
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 6.2e-35 151.0 134 60.4
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 9.9e-33 143.7 87 79.3
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 5.5e-31 137.9 120 55.8
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.3e-29 133.3 124 51.6
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 2.3e-29 132.5 126 54.8
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.4e-26 123.2 57 93.0
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 5.8e-25 117.9 114 56.1
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.9e-24 115.5 112 54.5
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 1.6e-22 109.8 74 59.5
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 5.1e-21 104.8 126 46.0
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 1.9e-20 102.8 81 54.3
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 2.5e-20 102.4 88 53.4
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 3.1e-18 95.5 62 72.6
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 8.5e-16 87.4 47 85.1
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 3.3e-12 75.5 35 97.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.0e-09 66.2 32 87.5
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 2.2e-08 62.8 35 77.1
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 3.8e-08 62.0 33 78.8


User provided reference genes

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