Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00074 Erythranthe guttata HOM05D004869 ORTHO05D005893 0.0e+00 1676.0 821 100.0
Oeu016255.1 Olea europaea HOM05D004869 ORTHO05D005893 0.0e+00 1414.1 833 82.4
Rhsim04G0226400 Rhododendron simsii HOM05D004869 ORTHO05D005893 0.0e+00 1334.3 829 77.1
Sopen01g027900 Solanum pennellii HOM05D004869 ORTHO05D005893 0.0e+00 1333.2 829 75.9
Sopen05g032860 Solanum pennellii HOM05D004869 ORTHO05D005893 0.0e+00 1332.8 830 76.0
Solyc05g054370.2 Solanum lycopersicum HOM05D004869 ORTHO05D005893 0.0e+00 1331.2 830 76.0
PGSC0003DMG400023436 Solanum tuberosum HOM05D004869 ORTHO05D005893 0.0e+00 1331.2 830 76.3
Cc03_g01500 Coffea canephora HOM05D004869 ORTHO05D005893 0.0e+00 1330.1 832 77.2
Solyc01g066310.4 Solanum lycopersicum HOM05D004869 ORTHO05D005893 0.0e+00 1324.7 829 75.5
vmacro08186 Vaccinium macrocarpon HOM05D004869 ORTHO05D005893 0.0e+00 1322.8 851 75.2
Dinv44350 Davidia involucrata HOM05D004869 ORTHO05D005893 0.0e+00 1320.8 816 77.6
SGA_v2.0_scaffold119G32706 Striga asiatica HOM05D004869 ORTHO05D005893 0.0e+00 1320.1 842 77.9
Peaxi162Scf00065g01213 Petunia axillaris HOM05D004869 ORTHO05D005893 0.0e+00 1318.9 830 76.1
Actinidia40299 Actinidia chinensis HOM05D004869 ORTHO05D005893 0.0e+00 1311.6 831 76.4
Hma1.2p1_1352F.1_g277460 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 0.0e+00 1311.2 831 76.4
Nitab4.5_0008670g0020 Nicotiana tabacum HOM05D004869 ORTHO05D005893 0.0e+00 1308.5 830 75.8
CAN.G449.73 Capsicum annuum HOM05D004869 ORTHO05D005893 0.0e+00 1307.0 830 74.8
Nitab4.5_0000695g0140 Nicotiana tabacum HOM05D004869 ORTHO05D005893 0.0e+00 1301.6 828 75.7
Cfa015427 Carpinus fangiana HOM05D004869 ORTHO05D005893 0.0e+00 1301.2 832 75.4
QL06p010392 Quercus lobata HOM05D004869 ORTHO05D005893 0.0e+00 1298.1 832 75.2
HanXRQChr17g0535991 Helianthus annuus HOM05D004869 ORTHO05D005893 0.0e+00 1294.3 829 75.0
CiPaw.01G145300 Carya illinoinensis HOM05D004869 ORTHO05D005893 0.0e+00 1292.3 831 75.3
MD16G1164100 Malus domestica HOM05D004869 ORTHO05D005893 0.0e+00 1288.9 815 76.8
TWI73G0801 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 0.0e+00 1286.6 828 74.0
GSVIVG01035107001 Vitis vinifera HOM05D004869 ORTHO05D005893 0.0e+00 1283.9 827 75.0
MD13G1164300 Malus domestica HOM05D004869 ORTHO05D005893 0.0e+00 1281.9 815 76.0
RcHm_v2.0_Chr4g0423401 Rosa chinensis HOM05D004869 ORTHO05D005893 0.0e+00 1280.4 816 75.1
Prupe.1G131800 Prunus persica HOM05D004869 ORTHO05D005893 0.0e+00 1279.6 818 75.9
CANSAT78G0178 Cannabis sativa HOM05D004869 ORTHO05D005893 0.0e+00 1278.1 831 73.6
Thecc.04G289100 Theobroma cacao HOM05D004869 ORTHO05D005893 0.0e+00 1276.2 834 74.2
ECA246G3101 Erigeron canadensis HOM05D004869 ORTHO05D005893 0.0e+00 1275.0 832 73.8
THA.LOC104802695 Tarenaya hassleriana HOM05D004869 ORTHO05D005893 0.0e+00 1273.8 826 74.3
Lsat_1_v5_gn_3_21560 Lactuca sativa HOM05D004869 ORTHO05D005893 0.0e+00 1272.7 873 71.0
MELO3C006684.2 Cucumis melo HOM05D004869 ORTHO05D005893 0.0e+00 1268.8 831 73.3
FvH4_4g18700 Fragaria vesca HOM05D004869 ORTHO05D005893 0.0e+00 1264.6 816 74.3
Atru.chr4.2905 Acer truncatum HOM05D004869 ORTHO05D005893 0.0e+00 1263.8 832 73.2
AT3G06810 Arabidopsis thaliana HOM05D004869 ORTHO05D005893 0.0e+00 1260.7 827 72.6
Cpa.g.sc50.161 Carica papaya HOM05D004869 ORTHO05D005893 0.0e+00 1260.4 832 73.3
CsaV3_3G014880 Cucumis sativus L. HOM05D004869 ORTHO05D005893 0.0e+00 1258.8 831 72.7
TWI53G1493 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 0.0e+00 1257.7 828 72.9
Carub.0003s0635 Capsella rubella HOM05D004869 ORTHO05D005893 0.0e+00 1257.3 828 72.5
Glyma.09G042000 Glycine max HOM05D004869 ORTHO05D005893 0.0e+00 1257.3 831 73.3
VMungo1309G2596 Vigna mungo HOM05D004869 ORTHO05D005893 0.0e+00 1255.0 831 72.8
AL3G17930 Arabidopsis lyrata HOM05D004869 ORTHO05D005893 0.0e+00 1254.6 827 72.3
COL.COLO4_13820 Corchorus olitorius HOM05D004869 ORTHO05D005893 0.0e+00 1254.6 831 73.9
ClCG05G006260 Citrullus lanatus HOM05D004869 ORTHO05D005893 0.0e+00 1254.2 831 72.8
Sed0001345 Sechium edule HOM05D004869 ORTHO05D005893 0.0e+00 1254.2 833 72.4
Thhalv10020074m.g Eutrema salsugineum HOM05D004869 ORTHO05D005893 0.0e+00 1253.8 827 72.4
FAN12G0537 Fragaria x ananassa HOM05D004869 ORTHO05D005893 0.0e+00 1251.9 825 73.1
Gorai.005G061800 Gossypium raimondii HOM05D004869 ORTHO05D005893 0.0e+00 1251.9 829 73.2
Potri.010G010448 Populus trichocarpa HOM05D004869 ORTHO05D005893 0.0e+00 1249.6 830 72.9
Lj6A681T39 Lonicera japonica HOM05D004869 ORTHO05D005893 0.0e+00 1248.4 831 72.6
Aqoxy5G00789 Aquilegia oxysepala HOM05D004869 ORTHO05D005893 0.0e+00 1247.3 834 72.9
Duzib212G0051 Durio zibethinus HOM05D004869 ORTHO05D005893 0.0e+00 1245.7 830 73.3
Glyma.15G150900 Glycine max HOM05D004869 ORTHO05D005893 0.0e+00 1243.0 831 72.3
Phvul.009G250700 Phaseolus vulgaris HOM05D004869 ORTHO05D005893 0.0e+00 1243.0 830 72.4
FAN17G0377 Fragaria x ananassa HOM05D004869 ORTHO05D005893 0.0e+00 1242.6 833 72.1
Lj6g0019427 Lotus japonicus HOM05D004869 ORTHO05D005893 0.0e+00 1241.9 820 74.1
Hund20507 Selenicereus undatus HOM05D004869 ORTHO05D005893 0.0e+00 1241.9 835 71.7
Sc19g0005490 Simmondsia chinensis HOM05D004869 ORTHO05D005893 0.0e+00 1241.5 789 74.8
FAN12G1313 Fragaria x ananassa HOM05D004869 ORTHO05D005893 0.0e+00 1240.3 855 70.9
Gohir.A02G051000 Gossypium hirsutum HOM05D004869 ORTHO05D005893 0.0e+00 1240.3 830 72.5
Sabra10G0006600 Salix brachista HOM05D004869 ORTHO05D005893 0.0e+00 1240.3 838 71.7
Potri.008G219000 Populus trichocarpa HOM05D004869 ORTHO05D005893 0.0e+00 1239.6 831 72.3
CARHR081430 Cardamine hirsuta HOM05D004869 ORTHO05D005893 0.0e+00 1237.6 827 71.5
C05p60510 Brassica napus HOM05D004869 ORTHO05D005893 0.0e+00 1236.9 822 71.8
BraA05t22852Z Brassica rapa HOM05D004869 ORTHO05D005893 0.0e+00 1236.9 822 71.5
BolC5t34705H Brassica oleracea HOM05D004869 ORTHO05D005893 0.0e+00 1236.5 822 71.8
Lalb_Chr15g0086081 Lupinus albus HOM05D004869 ORTHO05D005893 0.0e+00 1233.4 831 72.3
A05p41290 Brassica napus HOM05D004869 ORTHO05D005893 0.0e+00 1231.1 822 71.2
Aa31LG5G17400 Aethionema arabicum HOM05D004869 ORTHO05D005893 0.0e+00 1229.2 827 70.3
Gohir.D02G055900 Gossypium hirsutum HOM05D004869 ORTHO05D005893 0.0e+00 1228.8 829 72.4
EL10Ac3g06663 Beta vulgaris HOM05D004869 ORTHO05D005893 0.0e+00 1227.2 835 70.2
DCAR_027053 Daucus carota HOM05D004869 ORTHO05D005893 0.0e+00 1227.2 807 73.2
Sp3g05780 Schrenkiella parvula HOM05D004869 ORTHO05D005893 0.0e+00 1225.3 827 70.5
arahy.Tifrunner.gnm1.ann1.ZXWI6N Arachis hypogaea HOM05D004869 ORTHO05D005893 0.0e+00 1221.5 832 71.8
PSO210G1050 Papaver somniferum HOM05D004869 ORTHO05D005893 0.0e+00 1219.1 832 70.4
PSO832G2232 Papaver somniferum HOM05D004869 ORTHO05D005893 0.0e+00 1218.4 833 70.6
Lalb_Chr20g0117401 Lupinus albus HOM05D004869 ORTHO05D005893 0.0e+00 1216.4 831 70.8
Ciclev10004342m.g Citrus clementina HOM05D004869 ORTHO05D005893 0.0e+00 1213.7 829 71.3
Ciclev10004291m.g Citrus clementina HOM05D004869 ORTHO05D005893 0.0e+00 1206.0 830 71.2
CDE11G0521 Ceratophyllum demersum HOM05D004869 ORTHO05D005893 0.0e+00 1199.1 831 70.0
Ca_01910_v3 Cicer arietinum L. HOM05D004869 ORTHO05D005893 0.0e+00 1192.9 810 70.7
Zm00001eb111400 Zea mays HOM05D004869 ORTHO05D005893 0.0e+00 1189.1 835 69.5
Nn3g21544 Nelumbo nucifera HOM05D004869 ORTHO05D005893 0.0e+00 1179.1 775 73.5
ATR0693G241 Amborella trichopoda HOM05D004869 ORTHO05D005893 0.0e+00 1171.0 830 69.0
AUR62018045 Chenopodium quinoa HOM05D004869 ORTHO05D005893 0.0e+00 1170.2 831 68.5
AUR62015247 Chenopodium quinoa HOM05D004869 ORTHO05D005893 0.0e+00 1169.8 831 68.4
Os07g0675000 Oryza sativa ssp. japonica HOM05D004869 ORTHO05D005893 0.0e+00 1166.8 832 68.1
Manes.03G198800 Manihot esculenta HOM05D004869 ORTHO05D005893 0.0e+00 1163.3 831 69.3
HPP92_003120 Vanilla planifolia HOM05D004869 ORTHO05D005893 0.0e+00 1131.7 828 66.8
TAR365G0733 Trochodendron aralioides HOM05D004869 ORTHO05D005893 0.0e+00 1113.2 839 67.3
Ah.04g153720 Amaranthus hybridus HOM05D004869 ORTHO05D005893 0.0e+00 1085.9 861 63.6
Eucgr.B01578 Eucalyptus grandis HOM05D004869 ORTHO05D005893 0.0e+00 1082.0 719 71.5
MBI18_g44774_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 5.1e-311 1070.8 802 66.0
Pp3c22_4180 Physcomitrium patens HOM05D004869 ORTHO05D005893 5.2e-300 1034.2 835 61.2
Pp3c18_21710 Physcomitrium patens HOM05D004869 ORTHO05D005893 1.3e-298 1029.6 828 61.6
SMO202G0033 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 6.4e-290 1000.7 826 59.2
Haze_01165 Corylus avellana HOM05D004869 ORTHO05D005893 2.4e-289 998.8 847 61.3
arahy.Tifrunner.gnm1.ann1.YH0B1H Arachis hypogaea HOM05D004869 ORTHO05D005893 9.2e-289 996.9 823 62.7
Mapoly0111s0015 Marchantia polymorpha HOM05D004869 ORTHO05D005893 1.3e-271 939.9 824 55.5
SMO169G0300 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 3.0e-255 885.6 842 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2629 Anthoceros agrestis HOM05D004869 ORTHO05D005893 4.6e-248 861.7 711 59.5
CBR_g54445 Chara braunii HOM05D004869 ORTHO05D005893 9.0e-244 847.4 927 50.5
TPR.G26039 Trifolium pratense HOM05D004869 ORTHO05D005893 6.3e-237 824.7 589 66.9
SHI00220 Sapria himalayana HOM05D004869 ORTHO05D005893 1.7e-229 800.0 616 63.8
unitig_26.g10563 Utricularia gibba HOM05D004869 ORTHO05D005893 4.7e-224 781.9 552 71.9
Medtr2g435800 Medicago truncatula HOM05D004869 ORTHO05D005893 4.2e-217 758.8 575 64.0
DCAR_000477 Daucus carota HOM05D004869 ORTHO05D005893 1.0e-215 754.2 483 74.5
CSS0035117 Camellia sinensis var. sinensis HOM05D004869 ORTHO05D005893 4.5e-211 738.8 459 77.3
Psat1g156400 Pisum sativum HOM05D004869 ORTHO05D005893 5.0e-210 735.3 568 62.7
BcaNung06666 Brassica carinata HOM05D004869 ORTHO05D005893 3.2e-209 732.6 483 73.9
Cre16.g675850 Chlamydomonas reinhardtii HOM05D004869 ORTHO05D005893 4.0e-207 725.7 914 45.0
PRCOL_00002960 Prasinoderma coloniale HOM05D004869 ORTHO05D005893 2.1e-176 623.6 792 44.1
Hma1.2p1_0804F.1_g221110 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 3.7e-165 586.3 380 72.9
Oeu031983.1 Olea europaea HOM05D004869 ORTHO05D005893 7.8e-155 552.0 425 65.2
BcaC05g30559 Brassica carinata HOM05D004869 ORTHO05D005893 1.7e-149 534.3 625 48.3
MCO01G041 Micromonas commoda HOM05D004869 ORTHO05D005893 1.6e-128 464.5 425 55.8
MBI18_g37159_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 1.1e-127 461.8 417 61.6
DCAR_023301 Daucus carota HOM05D004869 ORTHO05D005893 3.1e-119 433.7 298 67.4
Cfa024444 Carpinus fangiana HOM05D004869 ORTHO05D005893 2.3e-106 391.0 418 48.6
Cfa022681 Carpinus fangiana HOM05D004869 ORTHO05D005893 7.2e-100 369.4 418 46.4
Medtr2g436030 Medicago truncatula HOM05D004869 ORTHO05D005893 6.1e-99 366.3 223 80.7
QL06p007479 Quercus lobata HOM05D004869 ORTHO05D005893 5.5e-92 343.2 233 73.8
Nn1g04010 Nelumbo nucifera HOM05D004869 ORTHO05D005893 1.7e-85 321.6 190 81.6
Rhsim04G0225600 Rhododendron simsii HOM05D004869 ORTHO05D005893 1.3e-77 295.4 322 52.2
unitig_26.g10564 Utricularia gibba HOM05D004869 ORTHO05D005893 1.0e-74 285.8 250 58.4
TPR.G13211 Trifolium pratense HOM05D004869 ORTHO05D005893 6.8e-74 283.1 170 83.5
SEGI_30643 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 1.9e-68 265.0 174 71.8
QL93p0200_0027 Quercus lobata HOM05D004869 ORTHO05D005893 3.2e-55 221.1 157 73.2
MCO01G771 Micromonas commoda HOM05D004869 ORTHO05D005893 3.6e-51 207.6 370 36.8
Rhsim04G0225700 Rhododendron simsii HOM05D004869 ORTHO05D005893 6.4e-48 196.8 133 77.4
Lsat_1_v5_gn_3_21640 Lactuca sativa HOM05D004869 ORTHO05D005893 5.6e-44 183.7 138 70.3
RcHm_v2.0_Chr3g0480631 Rosa chinensis HOM05D004869 ORTHO05D005893 3.6e-43 181.0 123 68.3
Rhsim04G0226200 Rhododendron simsii HOM05D004869 ORTHO05D005893 8.1e-43 179.9 150 66.7
RcHm_v2.0_Chr6g0311831 Rosa chinensis HOM05D004869 ORTHO05D005893 2.0e-33 148.7 111 64.9
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 4.9e-32 144.1 175 46.9
HanXRQChr01g0024801 Helianthus annuus HOM05D004869 ORTHO05D005893 3.5e-30 137.9 174 42.0
SEGI_32872 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 1.3e-29 136.0 89 76.4
SalBow5G3485 Salvia bowleyana HOM05D004869 ORTHO05D005893 6.9e-26 123.6 69 89.9
MBI18_g46557_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 1.5e-25 122.5 93 65.6
MBI18_g23297_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 2.0e-25 122.1 93 67.7
SEGI_25692 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 2.9e-24 118.2 113 48.7
SMO367G1086 Selaginella moellendorffii HOM05D001528 ORTHO05D006464 1.2e-22 112.8 287 30.0
BNapus_Darmor_BZH_scaffold_117p00100 Brassica napus HOM05D004869 ORTHO05D005893 1.0e-21 109.8 73 78.1
Haze_26447 Corylus avellana HOM05D001528 ORTHO05D006464 6.7e-21 107.1 366 25.7
PGSC0003DMG400027831 Solanum tuberosum HOM05D004869 ORTHO05D005893 8.7e-21 106.7 59 86.4
unitig_747.g22005 Utricularia gibba HOM05D001528 ORTHO05D006464 1.5e-20 105.9 379 26.1
AagrBONN_evm.TU.Sc2ySwM_117.3343 Anthoceros agrestis HOM05D001528 ORTHO05D006464 1.9e-20 105.5 269 30.9
BolC1t05585H Brassica oleracea HOM05D004869 ORTHO05D005893 4.3e-20 104.4 65 83.1
TPR.G25902 Trifolium pratense HOM05D000002 ORTHO05D000001 4.3e-20 104.4 73 61.6
Pp3c3_14940 Physcomitrium patens HOM05D001528 ORTHO05D006464 6.9e-18 97.1 282 27.3
TPR.G15436 Trifolium pratense HOM05D004869 ORTHO05D005893 6.9e-18 97.1 73 63.0
Haze_27126 Corylus avellana HOM05D001528 ORTHO05D006464 2.6e-17 95.1 399 23.6
Mapoly0154s0036 Marchantia polymorpha HOM05D001528 ORTHO05D006464 2.6e-17 95.1 282 28.4
PSO339G5049 Papaver somniferum HOM05D001528 ORTHO05D006464 7.6e-17 93.6 365 24.4
Lsat_1_v5_gn_4_34540 Lactuca sativa HOM05D004869 ORTHO05D005893 1.3e-16 92.8 204 32.4
PSO384G1162 Papaver somniferum HOM05D001528 ORTHO05D006464 1.3e-16 92.8 365 24.4
BcaC09g47921 Brassica carinata HOM05D004869 ORTHO05D005893 1.1e-15 89.7 57 80.7
AUR62025007 Chenopodium quinoa HOM05D001528 ORTHO05D006464 2.5e-15 88.6 319 24.8
PRCOL_00001565 Prasinoderma coloniale HOM05D001528 ORTHO05D006464 1.2e-14 86.3 289 27.7
HanXRQChr14g0453001 Helianthus annuus HOM05D001528 ORTHO05D006464 7.4e-12 77.0 282 24.8
Medtr0837s0010 Medicago truncatula HOM05D001528 ORTHO05D006464 9.7e-12 76.6 253 25.7
Cfa027299 Carpinus fangiana HOM05D001528 ORTHO05D006464 2.0e-09 68.9 434 21.9
Hma1.2p1_1662F.1_g296280 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 2.0e-09 68.9 53 56.6
AUR62006528 Chenopodium quinoa HOM05D001528 ORTHO05D006464 1.7e-08 65.9 401 20.7
Medtr2057s0010 Medicago truncatula HOM05D001528 ORTHO05D265507 2.2e-08 65.5 255 22.0


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