Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 9.0e-137 490.3 264 100.0
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 1.2e-64 250.8 195 69.2
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 1.3e-58 230.7 227 60.8
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 4.1e-57 225.7 209 62.2
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 5.4e-57 225.3 229 58.1
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 2.1e-56 223.4 161 72.0
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 1.0e-55 221.1 158 70.3
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 3.0e-55 219.5 167 67.7
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 3.9e-55 219.2 147 76.9
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 8.6e-55 218.0 176 68.8
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 1.9e-54 216.9 212 58.5
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 4.3e-54 215.7 150 75.3
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 4.3e-54 215.7 158 71.5
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 5.6e-54 215.3 150 74.7
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 7.3e-54 214.9 159 69.2
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 7.3e-54 214.9 150 74.0
Sopen10g001170 Solanum pennellii HOM05D002102 ORTHO05D008242 7.3e-54 214.9 152 73.7
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 1.2e-53 214.2 167 65.9
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 1.6e-53 213.8 147 75.5
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 2.1e-53 213.4 167 66.5
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 2.1e-53 213.4 218 58.7
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 3.6e-53 212.6 159 67.9
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 4.7e-53 212.2 159 67.3
Sc24g0002820 Simmondsia chinensis HOM05D002102 ORTHO05D008242 4.7e-53 212.2 225 55.1
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 6.2e-53 211.8 220 56.8
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 6.2e-53 211.8 176 65.3
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 6.2e-53 211.8 176 67.0
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 8.1e-53 211.5 159 66.7
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 8.1e-53 211.5 151 72.8
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 1.1e-52 211.1 167 64.7
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 1.1e-52 211.1 158 69.6
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 1.4e-52 210.7 194 59.8
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 1.8e-52 210.3 158 69.0
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 1.8e-52 210.3 197 57.9
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 1.8e-52 210.3 215 56.3
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 4.0e-52 209.1 147 75.5
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 5.2e-52 208.8 159 66.7
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 5.2e-52 208.8 188 60.1
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 5.2e-52 208.8 158 69.0
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 8.9e-52 208.0 149 72.5
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.2e-51 207.6 188 60.6
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 1.2e-51 207.6 147 72.1
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 1.2e-51 207.6 162 67.9
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 1.2e-51 207.6 185 62.2
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 2.0e-51 206.8 165 63.0
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 2.0e-51 206.8 165 63.0
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 2.0e-51 206.8 165 63.0
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 2.0e-51 206.8 147 72.1
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 2.6e-51 206.5 165 63.0
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 3.4e-51 206.1 150 72.7
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 5.8e-51 205.3 158 67.7
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 5.8e-51 205.3 154 70.8
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.3e-50 204.1 151 70.2
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 1.3e-50 204.1 150 69.3
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 1.7e-50 203.8 182 60.4
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 1.7e-50 203.8 147 73.5
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 1.7e-50 203.8 157 66.9
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 2.2e-50 203.4 147 73.5
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 2.2e-50 203.4 151 69.5
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 2.9e-50 203.0 177 63.3
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 2.9e-50 203.0 151 69.5
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.9e-50 203.0 151 69.5
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 3.7e-50 202.6 151 69.5
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 3.7e-50 202.6 158 70.3
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 4.9e-50 202.2 147 73.5
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 6.4e-50 201.8 221 59.3
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 1.4e-49 200.7 178 64.0
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 1.4e-49 200.7 140 71.4
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 1.9e-49 200.3 146 73.3
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 2.4e-49 199.9 183 61.2
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 4.1e-49 199.1 150 69.3
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 7.1e-49 198.4 163 64.4
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 7.1e-49 198.4 156 67.9
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 1.6e-48 197.2 199 56.8
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 1.6e-48 197.2 199 56.8
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 2.7e-48 196.4 149 67.8
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 4.6e-48 195.7 136 74.3
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 6.0e-48 195.3 150 68.7
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 1.0e-47 194.5 185 56.2
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 1.7e-47 193.7 183 59.6
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 6.6e-47 191.8 150 65.3
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 8.6e-47 191.4 183 60.7
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 8.6e-47 191.4 162 64.2
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 1.6e-45 187.2 149 64.4
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 8.1e-45 184.9 137 72.3
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 1.3e-42 177.6 126 72.2
SGA_v2.0_scaffold423G51451 Striga asiatica HOM05D002102 ORTHO05D008242 1.7e-42 177.2 176 59.7
AUR62040994 Chenopodium quinoa HOM05D002102 ORTHO05D008242 8.7e-39 164.9 126 66.7
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 2.5e-38 163.3 161 55.9
AUR62042810 Chenopodium quinoa HOM05D002102 ORTHO05D008242 2.8e-37 159.8 121 66.9
Oeu011782.1 Olea europaea HOM05D002102 ORTHO05D008242 2.8e-37 159.8 130 66.9
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 1.1e-36 157.9 161 55.3
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 1.8e-36 157.1 117 68.4
Duzib132G0691 Durio zibethinus HOM05D002102 ORTHO05D008242 6.9e-36 155.2 148 61.5
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 9.0e-36 154.8 150 59.3
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 9.3e-33 144.8 199 46.2
AagrBONN_evm.TU.Sc2ySwM_368.1584 Anthoceros agrestis HOM05D002102 ORTHO05D008242 2.7e-32 143.3 152 52.6
ATR0073G005 Amborella trichopoda HOM05D002102 ORTHO05D008242 4.6e-32 142.5 167 52.1
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 1.0e-31 141.4 126 57.1
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 1.2e-27 127.9 185 44.3
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 5.8e-27 125.6 98 62.2
RcHm_v2.0_Chr5g0021891 Rosa chinensis HOM05D002102 ORTHO05D008242 1.9e-25 120.6 90 64.4
SEGI_24162 Sequoiadendron giganteum HOM05D002102 ORTHO05D008242 2.4e-25 120.2 101 57.4
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 1.5e-22 110.9 119 55.5
RcHm_v2.0_Chr5g0021971 Rosa chinensis HOM05D002102 ORTHO05D008242 7.4e-22 108.6 76 69.7
Hund01844 Selenicereus undatus HOM05D002102 ORTHO05D008242 3.4e-19 99.8 65 76.9
Eucgr.L03440 Eucalyptus grandis HOM05D002102 ORTHO05D008242 4.5e-19 99.4 67 74.6
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 4.9e-18 95.9 125 47.2
Cre06.g280650 Chlamydomonas reinhardtii HOM05D002102 ORTHO05D008242 9.3e-17 91.7 99 53.5
BraA02t07887Z Brassica rapa HOM05D002102 ORTHO05D008242 1.6e-16 90.9 127 43.3
Actinidia31356 Actinidia chinensis HOM05D002102 ORTHO05D008242 2.7e-16 90.1 126 46.0
CBR_g21832 Chara braunii HOM05D002102 ORTHO05D008242 3.5e-16 89.7 141 41.1
RcHm_v2.0_Chr5g0021961 Rosa chinensis HOM05D002102 ORTHO05D008242 6.0e-16 89.0 66 69.7
BolC2t10554H Brassica oleracea HOM05D002102 ORTHO05D008242 1.3e-15 87.8 125 46.4
MD05G1242600 Malus domestica HOM05D002102 ORTHO05D008242 2.1e-13 80.5 64 67.2
RcHm_v2.0_Chr5g0021881 Rosa chinensis HOM05D002102 ORTHO05D008242 5.9e-11 72.4 54 68.5
RcHm_v2.0_Chr5g0021951 Rosa chinensis HOM05D002102 ORTHO05D008242 5.9e-11 72.4 61 65.6
Actinidia31357 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.7e-10 70.9 56 69.6
Nitab4.5_0007687g0040 Nicotiana tabacum HOM05D002102 ORTHO05D008242 2.9e-10 70.1 43 79.1
Nitab4.5_0001815g0140 Nicotiana tabacum HOM05D002102 ORTHO05D004119 5.0e-10 69.3 47 70.2
A02p28510 Brassica napus HOM05D002102 ORTHO05D008242 2.5e-09 67.0 131 32.1
ATR0109G022 Amborella trichopoda HOM05D002102 ORTHO05D008242 6.1e-08 62.4 63 54.0


User provided reference genes

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