Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 2.2e-90 335.9 204 100.0
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 1.0e-39 167.5 211 46.9
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 4.8e-37 158.7 215 42.3
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 2.4e-36 156.4 217 44.7
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 1.5e-35 153.7 215 40.9
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 3.4e-35 152.5 216 42.1
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 3.4e-35 152.5 210 41.0
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 1.3e-34 150.6 210 41.0
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.4e-33 147.1 215 38.6
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 7.9e-32 141.4 215 43.3
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 7.9e-32 141.4 215 43.3
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 1.0e-31 141.0 217 40.1
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 1.4e-31 140.6 221 40.3
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 2.3e-31 139.8 119 60.5
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 3.9e-31 139.0 204 41.2
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 5.1e-31 138.7 214 39.7
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 8.8e-31 137.9 123 55.3
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-30 137.5 216 41.7
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 1.1e-30 137.5 223 35.9
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.1e-30 137.5 221 40.7
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 4.3e-30 135.6 112 54.5
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 9.7e-30 134.4 223 39.9
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 2.2e-29 133.3 215 39.5
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 2.8e-29 132.9 88 68.2
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 3.7e-29 132.5 210 39.5
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 3.7e-29 132.5 122 55.7
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.1e-28 131.0 108 63.0
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 1.1e-28 131.0 218 37.6
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 1.8e-28 130.2 127 54.3
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 1.8e-28 130.2 95 64.2
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.8e-28 130.2 88 67.0
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 1.8e-28 130.2 225 46.2
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.1e-28 129.4 125 53.6
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 6.9e-28 128.3 214 41.1
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 6.9e-28 128.3 122 53.3
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 2.6e-27 126.3 127 48.0
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 5.9e-27 125.2 125 52.0
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 5.9e-27 125.2 115 52.2
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 5.9e-27 125.2 125 54.4
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 5.9e-27 125.2 127 52.0
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 7.7e-27 124.8 125 48.0
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 1.3e-26 124.0 87 65.5
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 1.7e-26 123.6 115 53.0
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 1.7e-26 123.6 223 35.9
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 2.2e-26 123.2 91 60.4
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 3.8e-26 122.5 86 65.1
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 3.8e-26 122.5 126 50.8
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 5.0e-26 122.1 208 40.4
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 6.5e-26 121.7 217 42.4
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 6.5e-26 121.7 93 61.3
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 6.5e-26 121.7 86 64.0
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 8.5e-26 121.3 221 35.7
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 8.5e-26 121.3 90 63.3
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 8.5e-26 121.3 111 53.2
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 8.5e-26 121.3 216 36.6
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 1.1e-25 120.9 215 38.1
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.4e-25 120.6 104 57.7
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.4e-25 120.6 104 57.7
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 1.4e-25 120.6 216 35.6
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 1.9e-25 120.2 211 40.3
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 1.9e-25 120.2 224 37.9
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.2e-25 119.0 90 62.2
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.2e-25 119.0 104 57.7
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.5e-25 118.6 90 62.2
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 9.4e-25 117.9 127 53.5
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 1.6e-24 117.1 124 52.4
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 1.6e-24 117.1 225 39.1
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 1.6e-24 117.1 124 50.0
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 2.1e-24 116.7 122 50.0
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 2.1e-24 116.7 220 44.5
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 3.6e-24 115.9 111 54.1
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 3.6e-24 115.9 128 50.8
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 7.9e-24 114.8 122 51.6
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 1.0e-23 114.4 122 51.6
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 1.0e-23 114.4 122 51.6
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 1.0e-23 114.4 123 50.4
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 1.0e-23 114.4 89 61.8
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 1.4e-23 114.0 122 50.8
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.4e-23 114.0 104 55.8
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 1.8e-23 113.6 122 51.6
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 1.8e-23 113.6 87 62.1
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.8e-23 113.6 90 60.0
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 5.2e-23 112.1 131 47.3
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 5.2e-23 112.1 93 59.1
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 6.7e-23 111.7 132 47.7
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 1.1e-22 110.9 121 52.9
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 1.1e-22 110.9 111 51.4
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 1.1e-22 110.9 122 50.8
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 1.5e-22 110.5 89 60.7
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 1.5e-22 110.5 111 50.5
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 1.5e-22 110.5 96 57.3
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 2.6e-22 109.8 119 49.6
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 3.3e-22 109.4 226 37.2
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 4.4e-22 109.0 133 45.1
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 2.2e-21 106.7 91 57.1
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 2.8e-21 106.3 252 42.1
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 2.8e-21 106.3 252 42.1
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.8e-21 106.3 115 48.7
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 6.3e-21 105.1 233 35.2
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 1.4e-20 104.0 227 36.6
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 2.4e-20 103.2 114 50.0
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 4.1e-20 102.4 221 37.1
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 5.3e-20 102.1 111 50.5
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 9.1e-20 101.3 111 52.3
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 1.2e-19 100.9 116 47.4
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 1.6e-19 100.5 128 46.1
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 2.0e-19 100.1 112 49.1
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 2.0e-19 100.1 112 49.1
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.6e-19 99.8 115 47.0
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 2.6e-19 99.8 192 33.9
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 3.5e-19 99.4 115 47.0
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 7.7e-19 98.2 111 50.5
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 1.0e-18 97.8 113 50.4
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 1.3e-18 97.4 112 48.2
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 1.3e-18 97.4 112 48.2
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 3.8e-18 95.9 84 54.8
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 3.8e-18 95.9 84 54.8
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 3.8e-18 95.9 84 54.8
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 5.0e-18 95.5 84 54.8
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 5.0e-18 95.5 84 54.8
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 1.9e-17 93.6 112 47.3
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 2.5e-17 93.2 112 47.3
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 2.5e-17 93.2 112 47.3
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 3.2e-17 92.8 128 43.8
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 3.2e-17 92.8 112 48.2
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 3.2e-17 92.8 119 50.4
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 4.2e-17 92.4 117 48.7
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 5.5e-17 92.0 112 45.5
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 5.5e-17 92.0 112 46.4
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 5.5e-17 92.0 112 46.4
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 5.5e-17 92.0 113 48.7
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 7.2e-17 91.7 112 45.5
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 7.2e-17 91.7 112 45.5
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 7.2e-17 91.7 123 46.3
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 7.2e-17 91.7 203 35.0
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 9.4e-17 91.3 112 46.4
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 9.4e-17 91.3 123 45.5
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 3.6e-16 89.4 112 44.6
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 8.0e-16 88.2 124 41.9
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 1.0e-15 87.8 124 41.9
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 1.0e-15 87.8 74 58.1
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 1.0e-15 87.8 65 66.2
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.4e-15 87.4 122 41.8
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 2.3e-15 86.7 122 41.0
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 2.3e-15 86.7 112 43.8
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 2.3e-15 86.7 104 45.2
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 3.0e-15 86.3 105 46.7
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 3.0e-15 86.3 105 46.7
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 1.2e-14 84.3 131 42.0
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 5.7e-14 82.0 122 38.5
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 2.2e-13 80.1 119 45.4
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 2.8e-13 79.7 87 51.7
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 3.7e-13 79.3 112 42.9
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 9.1e-12 74.7 92 45.7
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.2e-11 74.3 105 42.9
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 3.5e-11 72.8 112 41.1
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.0e-10 71.2 84 40.5
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 6.5e-10 68.6 186 45.7
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.6e-08 63.9 113 38.9
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 8.0e-08 61.6 112 39.3


User provided reference genes

Program Settings