Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 6.4e-38 160.2 79 100.0
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 5.1e-27 124.0 70 84.3
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 8.7e-27 123.2 62 93.5
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 1.1e-26 122.9 73 80.8
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 2.5e-26 121.7 59 96.6
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 5.6e-26 120.6 70 82.9
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 7.3e-26 120.2 70 81.4
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 9.6e-26 119.8 58 96.6
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 1.2e-25 119.4 60 93.3
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 1.2e-25 119.4 74 81.1
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 1.6e-25 119.0 70 82.9
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 2.8e-25 118.2 71 80.3
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 2.8e-25 118.2 69 81.2
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 8.1e-25 116.7 111 55.9
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.1e-24 116.3 70 80.0
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 1.4e-24 115.9 66 84.8
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 1.4e-24 115.9 71 80.3
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 1.4e-24 115.9 73 76.7
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 1.4e-24 115.9 72 77.8
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 1.8e-24 115.5 65 84.6
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 2.4e-24 115.2 71 76.1
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 3.1e-24 114.8 75 77.3
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 3.1e-24 114.8 73 80.8
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 3.1e-24 114.8 68 79.4
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 4.0e-24 114.4 73 79.5
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 6.9e-24 113.6 63 85.7
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 6.9e-24 113.6 65 83.1
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 9.0e-24 113.2 59 89.8
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 9.0e-24 113.2 69 78.3
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 1.2e-23 112.8 65 84.6
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 1.2e-23 112.8 65 83.1
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 1.2e-23 112.8 72 77.8
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 1.5e-23 112.5 68 77.9
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.5e-23 112.5 68 77.9
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.5e-23 112.5 68 77.9
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.5e-23 112.5 68 77.9
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 2.0e-23 112.1 71 78.9
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 3.4e-23 111.3 73 79.5
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 3.4e-23 111.3 72 73.6
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 3.4e-23 111.3 72 73.6
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 4.4e-23 110.9 58 89.7
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 5.8e-23 110.5 59 86.4
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 5.8e-23 110.5 71 76.1
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 9.9e-23 109.8 68 79.4
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 9.9e-23 109.8 72 73.6
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 9.9e-23 109.8 72 75.0
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 1.3e-22 109.4 66 78.8
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 1.3e-22 109.4 72 76.4
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 1.3e-22 109.4 59 88.1
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 1.3e-22 109.4 72 75.0
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 1.7e-22 109.0 65 81.5
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 1.7e-22 109.0 72 73.6
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 1.7e-22 109.0 72 76.4
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 2.2e-22 108.6 66 80.3
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 2.2e-22 108.6 67 79.1
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 2.2e-22 108.6 56 91.1
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 2.2e-22 108.6 65 83.1
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 2.9e-22 108.2 76 71.1
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 2.9e-22 108.2 59 84.7
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 2.9e-22 108.2 59 84.7
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 2.9e-22 108.2 69 75.4
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 2.9e-22 108.2 60 81.7
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 2.9e-22 108.2 60 85.0
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 3.8e-22 107.8 66 80.3
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 4.9e-22 107.5 72 72.2
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 8.4e-22 106.7 73 75.3
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.1e-21 106.3 57 89.5
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 2.4e-21 105.1 60 83.3
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 3.2e-21 104.8 52 94.2
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 3.2e-21 104.8 52 94.2
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 3.2e-21 104.8 52 94.2
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 3.2e-21 104.8 52 94.2
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 3.2e-21 104.8 60 86.7
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 5.4e-21 104.0 75 70.7
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 5.4e-21 104.0 66 74.2
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 5.4e-21 104.0 67 76.1
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 7.1e-21 103.6 52 92.3
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 7.1e-21 103.6 52 92.3
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 7.1e-21 103.6 52 92.3
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 7.1e-21 103.6 75 70.7
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 7.1e-21 103.6 52 92.3
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 7.1e-21 103.6 52 92.3
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 7.1e-21 103.6 52 92.3
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 9.3e-21 103.2 59 84.7
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 1.3e-19 99.4 93 59.1
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 1.3e-19 99.4 58 81.0
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 2.3e-19 98.6 55 87.3
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 6.6e-19 97.1 63 76.2
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 8.7e-19 96.7 57 77.2
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.5e-18 95.9 57 77.2
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 2.5e-18 95.1 52 86.5
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 5.6e-18 94.0 67 73.1
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 7.3e-18 93.6 52 84.6
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 6.2e-17 90.5 44 95.5
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 8.1e-17 90.1 71 67.6
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 8.1e-17 90.1 51 86.3
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 8.1e-17 90.1 54 74.1
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 1.1e-16 89.7 44 93.2
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 1.4e-16 89.4 63 71.4
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 1.4e-16 89.4 44 95.5
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 2.4e-16 88.6 52 75.0
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 6.9e-16 87.0 44 93.2
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 9.0e-16 86.7 60 76.7
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 2.0e-15 85.5 42 95.2
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 5.8e-15 84.0 44 86.4
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 5.4e-13 77.4 44 81.8
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 7.1e-13 77.0 49 77.6
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.1e-12 75.5 49 75.5
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 2.3e-11 72.0 37 91.9
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.6e-09 65.9 43 69.8
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.4e-08 62.8 32 87.5
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.4e-08 62.8 32 87.5
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 1.4e-08 62.8 28 96.4
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 4.0e-08 61.2 67 52.2
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 5.3e-08 60.8 69 49.3
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 4.5e-07 57.8 68 50.0
Ah.02g131100 Amaranthus hybridus HOM05D006885 ORTHO05D008606 8.4e-06 53.5 34 73.5


User provided reference genes

Program Settings