Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.9e-206 722.2 359 100.0
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 3.0e-159 565.5 351 80.6
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 9.0e-156 553.9 386 73.6
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 7.6e-155 550.8 351 79.2
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.8e-154 548.5 354 76.8
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 4.2e-153 545.0 354 76.0
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 7.1e-153 544.3 350 76.6
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.6e-152 543.1 354 76.8
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 2.7e-152 542.3 358 74.6
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 4.6e-152 541.6 355 75.2
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 6.0e-152 541.2 359 76.6
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 7.9e-152 540.8 354 74.9
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 7.9e-152 540.8 354 76.0
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 1.3e-151 540.0 354 75.1
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.3e-151 540.0 354 75.1
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 2.3e-151 539.3 359 74.7
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.1e-150 537.0 351 74.9
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 1.5e-150 536.6 355 74.9
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 5.7e-150 534.6 350 76.0
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.7e-150 534.6 352 75.3
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.6e-149 533.1 356 75.6
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 2.2e-149 532.7 353 73.9
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 2.8e-149 532.3 354 75.4
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 3.7e-149 531.9 354 75.1
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 4.8e-149 531.6 355 76.1
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.1e-148 530.4 355 76.1
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 1.1e-148 530.4 359 73.3
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.4e-148 530.0 355 74.6
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.1e-148 528.9 360 72.8
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 5.3e-148 528.1 351 75.8
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 6.9e-148 527.7 350 74.9
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 9.0e-148 527.3 354 75.1
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 1.2e-147 526.9 359 74.1
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 2.6e-147 525.8 359 74.9
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 2.6e-147 525.8 353 75.6
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 4.5e-147 525.0 351 73.2
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 4.5e-147 525.0 351 73.2
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 7.7e-147 524.2 353 74.5
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 2.2e-146 522.7 351 74.9
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 6.5e-146 521.2 355 73.8
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 1.4e-145 520.0 345 75.4
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.4e-145 520.0 366 72.4
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.4e-145 520.0 358 71.8
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 5.5e-145 518.1 368 71.7
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 9.4e-145 517.3 355 72.7
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 2.1e-144 516.2 362 72.9
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.7e-144 515.8 357 73.4
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.4e-143 513.5 327 77.7
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.8e-143 513.1 354 72.3
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 5.1e-143 511.5 353 73.7
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 6.7e-143 511.1 359 72.1
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.1e-142 510.4 355 73.2
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.0e-142 509.6 327 76.8
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 2.5e-142 509.2 353 72.8
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.8e-140 503.1 356 71.3
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 6.9e-140 501.1 332 76.2
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 4.5e-139 498.4 331 74.3
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 7.7e-139 497.7 354 71.2
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.7e-138 496.5 364 70.3
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.7e-138 496.5 336 72.0
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 2.9e-138 495.7 351 70.1
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 3.8e-138 495.4 354 71.8
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.5e-138 494.6 333 74.2
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 8.5e-138 494.2 352 69.9
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.2e-137 492.3 343 72.0
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 5.5e-137 491.5 359 70.5
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 7.2e-137 491.1 354 70.3
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 6.1e-136 488.0 357 68.6
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 1.8e-135 486.5 325 72.6
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 6.7e-135 484.6 356 67.1
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 8.8e-135 484.2 311 78.8
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 7.4e-134 481.1 321 73.2
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 9.7e-134 480.7 340 72.6
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.3e-133 480.3 328 72.3
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.2e-133 479.6 348 71.3
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 3.7e-133 478.8 346 70.2
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 8.2e-133 477.6 354 68.6
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.1e-132 477.2 322 70.2
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 1.4e-132 476.9 325 71.1
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 2.4e-132 476.1 355 67.6
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 2.4e-132 476.1 344 70.9
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.1e-132 475.7 351 69.5
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 9.1e-132 474.2 419 61.3
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 9.1e-132 474.2 325 69.2
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.0e-131 473.0 325 71.1
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.0e-130 470.7 329 70.5
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 2.9e-130 469.2 378 64.3
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 5.5e-129 464.9 329 69.9
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 2.1e-128 463.0 330 70.6
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.7e-128 462.6 338 68.3
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 3.6e-128 462.2 364 63.7
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 4.7e-128 461.8 325 68.6
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 1.0e-127 460.7 331 68.9
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 1.5e-126 456.8 331 68.0
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 4.4e-126 455.3 317 71.0
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 2.8e-125 452.6 369 64.0
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 2.4e-124 449.5 326 66.0
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 3.1e-124 449.1 322 67.7
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 3.1e-124 449.1 355 65.4
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 3.1e-124 449.1 325 69.2
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 7.0e-124 448.0 331 69.2
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 9.1e-124 447.6 346 67.3
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 1.2e-123 447.2 319 68.0
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 1.6e-123 446.8 319 68.0
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 2.6e-123 446.0 320 67.8
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 2.6e-123 446.0 332 67.8
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 5.9e-123 444.9 327 66.1
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 5.9e-123 444.9 311 70.4
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 7.7e-123 444.5 322 67.4
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 5.0e-122 441.8 319 66.5
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 5.0e-122 441.8 335 65.4
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 8.5e-122 441.0 320 66.9
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 8.5e-122 441.0 320 67.2
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.1e-121 440.7 319 67.4
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.9e-121 439.9 320 66.9
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.9e-121 439.9 350 62.9
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 1.9e-121 439.9 359 62.1
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 9.4e-121 437.6 314 69.1
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 9.4e-121 437.6 325 66.8
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.2e-120 437.2 320 66.2
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 2.1e-120 436.4 320 64.7
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 6.1e-120 434.9 313 68.4
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 3.3e-118 429.1 268 78.4
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 4.1e-116 422.2 328 63.4
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 6.5e-114 414.8 324 65.1
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 8.0e-112 407.9 364 60.2
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 1.2e-110 404.1 278 75.5
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 5.7e-110 401.7 264 77.7
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.7e-109 400.2 533 43.7
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.8e-108 396.7 289 72.7
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 2.9e-98 362.8 321 59.8
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 2.5e-97 359.8 354 54.2
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 1.0e-95 354.4 232 76.3
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 5.4e-92 342.0 335 53.1
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 6.8e-87 325.1 206 78.2
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.5e-86 323.9 242 64.9
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 8.3e-85 318.2 290 56.6
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 3.2e-84 316.2 280 60.4
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.6e-83 313.9 233 69.5
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 3.3e-81 306.2 203 74.9
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.1e-76 291.2 206 70.9
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.4e-76 290.8 267 58.4
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.5e-73 280.0 189 73.5
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 6.0e-67 258.8 163 79.8
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.2e-62 244.6 375 39.2
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 4.2e-60 236.1 190 66.3
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 4.6e-59 232.6 168 66.1
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 5.3e-55 219.2 214 54.2
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 2.9e-53 213.4 272 47.8
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.8e-53 213.0 165 65.5
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.1e-52 211.5 160 65.0
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 1.4e-47 194.5 147 65.3
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 1.9e-44 184.1 197 52.3
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 4.2e-44 183.0 329 40.1
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.9e-33 147.5 116 64.7
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 4.2e-28 129.8 137 48.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.5e-28 129.4 301 33.6
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 3.0e-26 123.6 381 30.4
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 2.0e-25 120.9 72 83.3
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 5.9e-22 109.4 252 33.3
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.5e-20 104.0 67 70.1
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 4.7e-19 99.8 61 73.8
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.3e-18 97.4 57 80.7
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.9e-18 96.7 127 42.5
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 4.4e-17 93.2 86 54.7
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.3e-13 81.6 60 70.0
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.0e-10 70.5 49 61.2
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 3.3e-09 67.0 81 43.2


User provided reference genes

Program Settings