Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H01045 Erythranthe guttata HOM05D009304 ORTHO05D026975 1.2e-104 383.6 259 100.0
MSTRG.14193 Avicennia marina HOM05D033380 ORTHO05D026975 5.1e-44 182.2 261 56.7
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 1.3e-18 97.8 310 34.2
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 2.0e-16 90.5 303 35.0
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 4.5e-16 89.4 300 32.7
PGSC0003DMG400018324 Solanum tuberosum HOM05D009304 ORTHO05D003109 1.7e-15 87.4 301 32.9
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 3.3e-14 83.2 303 32.3
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 2.8e-13 80.1 240 35.0
Nitab4.5_0002370g0010 Nicotiana tabacum HOM05D009304 ORTHO05D003109 1.0e-12 78.2 263 32.3
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 1.0e-12 78.2 300 31.7
Solyc08g068460.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 7.5e-11 72.0 264 31.8
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 3.7e-10 69.7 290 33.1
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 3.7e-10 69.7 297 32.0
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 4.9e-10 69.3 288 32.3
Solyc01g106180.3 Solanum lycopersicum HOM05D009304 ORTHO05D003109 1.4e-09 67.8 120 39.2
Sopen12g021050 Solanum pennellii HOM05D009304 ORTHO05D003109 1.8e-09 67.4 120 40.0
Actinidia11074 Actinidia chinensis HOM05D002331 ORTHO05D003109 3.5e-08 63.2 248 35.1
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 1.3e-07 61.2 259 31.7
CAN.G996.13 Capsicum annuum HOM05D009304 ORTHO05D003109 2.9e-07 60.1 201 31.8
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 3.9e-07 59.7 300 30.0
SGA_v2.0_scaffold238G43880 Striga asiatica HOM05D033380 ORTHO05D026975 3.9e-07 59.7 85 50.6
Hma1.2p1_0875F.1_g231510 Hydrangea macrophylla HOM05D009304 ORTHO05D003109 6.6e-07 58.9 247 32.0
Glyma.12G108500 Glycine max HOM05D010177 ORTHO05D003109 8.6e-07 58.5 306 37.3
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 8.6e-07 58.5 241 29.5
Rhsim04G0066200 Rhododendron simsii HOM05D009304 ORTHO05D003109 8.6e-07 58.5 176 34.7
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 8.6e-07 58.5 298 28.5
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 1.1e-06 58.2 327 29.7
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 1.1e-06 58.2 291 29.6
VMungo1080G0072 Vigna mungo HOM05D010177 ORTHO05D003109 1.5e-06 57.8 262 28.2
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.9e-06 57.4 300 29.3
Oeu025512.1 Olea europaea HOM05D009304 ORTHO05D003109 4.3e-06 56.2 281 27.8
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 4.3e-06 56.2 233 29.6
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 9.5e-06 55.1 286 30.4


User provided reference genes

Program Settings