Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 1.8e-134 482.6 251 100.0
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 2.6e-85 319.3 248 69.4
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 3.4e-69 265.8 251 58.6
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 8.4e-68 261.2 250 56.4
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 1.1e-67 260.8 253 56.1
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 4.2e-67 258.8 253 57.7
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 1.3e-65 253.8 253 54.9
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 1.9e-64 250.0 256 55.1
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 5.7e-64 248.4 258 56.2
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 9.7e-64 247.7 250 54.8
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 3.7e-63 245.7 250 54.4
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.1e-59 234.2 251 53.0
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.5e-56 223.8 262 50.0
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 3.3e-56 222.6 254 50.4
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 6.3e-55 218.4 256 50.8
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 2.4e-54 216.5 296 46.6
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 5.3e-54 215.3 254 49.2
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 9.1e-54 214.5 164 73.8
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.0e-52 211.1 248 50.0
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 2.2e-52 209.9 253 49.4
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 2.9e-52 209.5 250 47.6
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 8.5e-52 208.0 248 48.0
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 1.9e-51 206.8 250 46.8
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.9e-51 206.8 262 46.9
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 2.5e-51 206.5 247 46.6
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 4.2e-51 205.7 247 46.6
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 2.1e-50 203.4 247 48.6
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 2.7e-50 203.0 247 48.2
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 6.1e-50 201.8 252 49.2
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 1.8e-49 200.3 260 46.2
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 3.9e-49 199.1 238 49.6
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 6.7e-49 198.4 249 48.2
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 8.8e-49 198.0 253 47.0
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.1e-48 197.6 249 45.0
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.1e-48 197.6 253 47.0
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 2.6e-48 196.4 251 47.4
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 7.4e-48 194.9 254 46.5
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 9.7e-48 194.5 372 36.3
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 1.3e-47 194.1 253 46.2
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 1.7e-47 193.7 215 54.9
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 1.7e-47 193.7 262 45.0
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 1.8e-46 190.3 250 44.8
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 1.8e-46 190.3 250 48.0
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 2.4e-46 189.9 250 48.0
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 3.1e-46 189.5 270 44.8
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 3.1e-46 189.5 174 57.5
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 5.3e-46 188.7 252 47.2
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 7.0e-46 188.3 253 46.6
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 9.1e-46 188.0 270 44.4
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 1.2e-45 187.6 250 47.2
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 2.6e-45 186.4 250 46.8
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 5.5e-43 178.7 250 46.0
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 1.6e-42 177.2 244 46.7
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 3.6e-42 176.0 265 44.2
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 4.7e-42 175.6 249 43.8
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 4.0e-41 172.6 265 44.9
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 8.8e-41 171.4 265 43.8
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 8.8e-41 171.4 265 43.8
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 2.6e-40 169.9 185 53.0
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 3.3e-40 169.5 254 43.3
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 6.3e-39 165.2 273 41.8
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 6.3e-39 165.2 304 39.8
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 3.1e-38 162.9 224 46.9
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 1.2e-37 161.0 257 40.5
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 2.0e-37 160.2 271 39.5
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 4.5e-37 159.1 171 48.5
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.0e-36 157.9 190 46.8
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 5.0e-36 155.6 155 51.6
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 1.9e-35 153.7 249 42.2
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 9.4e-35 151.4 255 41.2
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 1.2e-34 151.0 254 40.9
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 2.3e-33 146.7 203 45.3
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 4.0e-33 146.0 242 39.3
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 1.2e-32 144.4 256 37.9
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 2.0e-32 143.7 252 40.9
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 2.6e-32 143.3 249 41.4
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 3.4e-32 142.9 175 46.9
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 5.7e-32 142.1 252 40.9
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 1.7e-31 140.6 251 39.8
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 2.8e-31 139.8 249 38.2
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 8.3e-31 138.3 253 38.3
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 1.8e-30 137.1 253 37.9
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 1.8e-30 137.1 253 37.9
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 3.1e-30 136.3 250 42.0
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 5.4e-30 135.6 249 40.2
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 1.2e-29 134.4 266 34.6
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 5.0e-28 129.0 198 38.9
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 1.1e-27 127.9 250 38.0
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.9e-27 127.1 261 35.6
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 9.4e-27 124.8 223 40.4
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.6e-26 124.0 155 48.4
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 6.1e-26 122.1 111 55.0
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 1.4e-25 120.9 185 40.0
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 1.4e-25 120.9 163 47.2
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.5e-24 117.5 156 48.1
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 4.4e-24 115.9 233 36.1
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 7.5e-24 115.2 264 30.3
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 7.0e-22 108.6 107 52.3
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 2.3e-20 103.6 259 35.1
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 1.5e-19 100.9 252 31.3
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 7.3e-19 98.6 87 56.3
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 1.6e-18 97.4 240 35.0
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 8.9e-17 91.7 238 27.7
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 3.4e-16 89.7 106 43.4
Os04g0693200 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 8.0e-10 68.6 97 39.2
Zm00001eb434540 Zea mays HOM05D007225 ORTHO05D009062 7.5e-08 62.0 93 40.9
Peaxi162Scf00172g00068 Petunia axillaris HOM05D007225 ORTHO05D009062 1.7e-07 60.8 78 46.2
CBR_g23098 Chara braunii HOM05D007225 ORTHO05D009062 8.3e-07 58.5 265 21.1
arahy.Tifrunner.gnm1.ann1.LBHD5T Arachis hypogaea HOM05D007225 ORTHO05D009062 7.0e-06 55.5 150 33.3


User provided reference genes

Program Settings