Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00393 Erythranthe guttata HOM05D006664 ORTHO05D009007 4.2e-239 830.9 392 100.0
Migut.A00084 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.1e-110 403.3 416 54.3
Migut.N00712 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.6e-89 334.0 410 50.5
Migut.E01487 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.5e-63 247.7 396 41.4
Migut.E01489 Erythranthe guttata HOM05D006664 ORTHO05D009007 8.3e-62 241.9 404 40.1
Migut.A00601 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.4e-61 240.4 396 38.6
Migut.A00599 Erythranthe guttata HOM05D006664 ORTHO05D009007 5.4e-61 239.2 376 41.8
Migut.A00617 Erythranthe guttata HOM05D006664 ORTHO05D009007 4.5e-60 236.1 395 39.5
SalBow1G0518 Salvia bowleyana HOM05D006664 ORTHO05D009007 5.6e-58 229.2 385 37.1
Migut.D00754 Erythranthe guttata HOM05D006664 ORTHO05D009007 7.3e-58 228.8 392 37.5
Migut.A00600 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.2e-57 228.0 325 43.1
Migut.D00613 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.6e-55 220.3 393 37.7
SalBow1G1554 Salvia bowleyana HOM05D006664 ORTHO05D009007 5.7e-55 219.2 397 37.3
SalBow1G2277 Salvia bowleyana HOM05D006664 ORTHO05D009007 5.7e-55 219.2 394 37.6
SalBow1G2147 Salvia bowleyana HOM05D006664 ORTHO05D009007 9.8e-55 218.4 387 38.8
SalBow1G5157 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.3e-54 218.0 387 38.0
Migut.A00618 Erythranthe guttata HOM05D006664 ORTHO05D009007 3.7e-54 216.5 391 38.4
Migut.A00615 Erythranthe guttata HOM05D006664 ORTHO05D009007 6.4e-54 215.7 397 38.0
Migut.A00604 Erythranthe guttata HOM05D006664 ORTHO05D009007 4.1e-53 213.0 371 37.7
SalBow1G1774 Salvia bowleyana HOM05D006664 ORTHO05D009007 9.2e-53 211.8 392 36.2
SalBow1G7640 Salvia bowleyana HOM05D006664 ORTHO05D009007 9.2e-53 211.8 395 37.0
SalBow1G0151 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.7e-52 210.3 378 35.7
SalBow1G3386 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.0e-51 208.4 393 37.7
SalBow1G2059 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.7e-51 207.6 384 37.5
SGA_v2.0_scaffold305G47956 Striga asiatica HOM05D006664 ORTHO05D009007 1.7e-51 207.6 392 36.2
SalBow1G1867 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.3e-51 207.2 387 36.4
SalBow1G5259 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.3e-51 207.2 387 36.4
SalBow1G7502 Salvia bowleyana HOM05D006664 ORTHO05D009007 3.0e-51 206.8 398 36.4
SalBow1G5956 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.1e-50 204.9 397 36.8
Migut.A00598 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.5e-50 204.5 380 38.7
Migut.D00751 Erythranthe guttata HOM05D006664 ORTHO05D009007 3.3e-50 203.4 381 36.2
SalBow4G1294 Salvia bowleyana HOM05D006664 ORTHO05D009007 3.3e-50 203.4 371 35.0
Migut.A00619 Erythranthe guttata HOM05D006664 ORTHO05D009007 7.3e-50 202.2 383 35.5
SalBow1G6969 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.8e-49 200.3 445 33.0
SalBow1G0567 Salvia bowleyana HOM05D006664 ORTHO05D009007 8.0e-49 198.7 376 35.6
SGA_v2.0_scaffold227G43212 Striga asiatica HOM05D006664 ORTHO05D009007 1.9e-45 187.6 370 35.4
Migut.D00614 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.4e-45 187.2 395 33.7
SGA_v2.0_scaffold227G43210 Striga asiatica HOM05D006664 ORTHO05D009007 4.1e-45 186.4 390 34.4
SalBow1G6396 Salvia bowleyana HOM05D006664 ORTHO05D009007 5.4e-45 186.0 381 33.6
SalBow1G0552 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.7e-44 183.7 380 34.2
SalBow1G3006 Salvia bowleyana HOM05D006664 ORTHO05D009007 6.0e-44 182.6 353 36.0
SalBow1G3269 Salvia bowleyana HOM05D006664 ORTHO05D009007 6.0e-44 182.6 389 32.6
SalBow1G5785 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.3e-43 180.6 375 35.5
Migut.E01469 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.1e-42 178.3 282 41.5
SalBow1G1954 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.1e-41 174.1 379 34.0
SalBow1G4853 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.7e-41 172.9 379 33.8
Migut.A00481 Erythranthe guttata HOM05D006664 ORTHO05D009007 5.2e-40 169.5 314 36.6
Migut.M00667 Erythranthe guttata HOM05D006664 ORTHO05D009007 5.2e-40 169.5 365 34.2
SGA_v2.0_scaffold69G23259 Striga asiatica HOM05D006664 ORTHO05D009007 9.9e-39 165.2 397 32.7
SalBow2G1749 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.2e-38 164.1 385 34.0
SGA_v2.0_scaffold205G41777 Striga asiatica HOM05D006664 ORTHO05D009007 6.4e-38 162.5 378 32.8
SalBow1G5395 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.1e-37 159.8 318 36.5
Migut.A00602 Erythranthe guttata HOM05D006664 ORTHO05D009007 3.3e-34 150.2 246 38.2
SalBow1G4503 Salvia bowleyana HOM05D000486 ORTHO05D009007 6.2e-33 146.0 326 34.4
SalBow1G7229 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.4e-32 144.1 326 32.8
SalBow1G1501 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.5e-31 141.4 325 32.9
Actinidia23407 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.6e-31 140.6 361 28.3
Actinidia23408 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.6e-31 140.6 361 28.3
Actinidia27246 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.6e-31 140.6 361 28.3
Actinidia38558 Actinidia chinensis HOM05D006664 ORTHO05D009007 1.4e-29 134.8 364 28.8
SalBow1G3827 Salvia bowleyana HOM05D006664 ORTHO05D009007 3.5e-28 130.2 321 32.7
SalBow1G7721 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.6e-28 129.8 303 32.7
CSS0029898 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 1.7e-27 127.9 372 28.5
CSS0006076 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 3.9e-27 126.7 372 28.2
Migut.A00616 Erythranthe guttata HOM05D006664 ORTHO05D009007 5.1e-27 126.3 241 38.6
Migut.M00510 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.5e-26 124.8 126 52.4
SalBow4G0263 Salvia bowleyana HOM05D006664 ORTHO05D009007 3.3e-26 123.6 283 31.8
SalBow1G1274 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.5e-23 114.8 193 34.2
SGA_v2.0_scaffold205G41761 Striga asiatica HOM05D000423 ORTHO05D000284 4.4e-23 113.2 257 33.5
Rhsim08G0071800 Rhododendron simsii HOM05D006664 ORTHO05D009007 1.9e-21 107.8 341 26.7
SalBow1G6449 Salvia bowleyana HOM05D006664 ORTHO05D009007 5.4e-21 106.3 175 37.1
Migut.N02092 Erythranthe guttata HOM05D006664 ORTHO05D009007 7.1e-21 105.9 122 44.3
Dinv12850 Davidia involucrata HOM05D006664 ORTHO05D009007 9.3e-21 105.5 325 26.5
Dinv07586 Davidia involucrata HOM05D006664 ORTHO05D009007 7.8e-20 102.4 355 25.4
Lj2A257T62 Lonicera japonica HOM05D006664 ORTHO05D009007 1.0e-19 102.1 297 29.0
SalBow1G5592 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.0e-19 102.1 213 33.8
Cc04_g03850 Coffea canephora HOM05D006664 ORTHO05D009007 1.9e-18 97.8 274 29.2
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 4.3e-18 96.7 375 24.5
Cpa.g.sc73.88 Carica papaya HOM05D006664 ORTHO05D009007 2.1e-17 94.4 249 27.7
SalBow1G0933 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.8e-17 93.2 196 36.7
SGA_v2.0_scaffold361G49912 Striga asiatica HOM05D006664 ORTHO05D009007 1.8e-16 91.3 360 25.3
Nn1g09439 Nelumbo nucifera HOM05D006664 ORTHO05D008819 5.3e-16 89.7 361 26.9
SGA_v2.0_scaffold135G34816 Striga asiatica HOM05D006664 ORTHO05D009007 5.3e-16 89.7 250 30.0
Rhsim07G0046100 Rhododendron simsii HOM05D006664 ORTHO05D009007 6.9e-16 89.4 352 25.6
COL.COLO4_14611 Corchorus olitorius HOM05D008437 ORTHO05D010577 9.0e-16 89.0 243 24.7
Thecc.05G022700 Theobroma cacao HOM05D008437 ORTHO05D010577 8.4e-14 82.4 249 25.7
CSS0044623 Camellia sinensis var. sinensis HOM05D008437 ORTHO05D010577 1.9e-13 81.3 235 28.5
COL.COLO4_27629 Corchorus olitorius HOM05D008437 ORTHO05D010577 3.2e-13 80.5 366 22.4
Nn1g09856 Nelumbo nucifera HOM05D006664 ORTHO05D009007 5.4e-13 79.7 168 29.8
QL07p036071 Quercus lobata HOM05D008437 ORTHO05D010577 2.7e-12 77.4 238 26.5
SalBow1G7401 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.7e-12 77.4 166 33.1
Nn2g13599 Nelumbo nucifera HOM05D008437 ORTHO05D008819 6.0e-12 76.3 248 27.0
CiPaw.05G236300 Carya illinoinensis HOM05D006664 ORTHO05D009007 7.9e-12 75.9 326 25.5
PSO832G1176 Papaver somniferum HOM05D000007 ORTHO05D000676 5.1e-11 73.2 270 27.4
Nn1g09443 Nelumbo nucifera HOM05D007726 ORTHO05D008819 1.9e-10 71.2 298 26.5
SGA_v2.0_scaffold7G03711 Striga asiatica HOM05D006664 ORTHO05D009007 1.9e-10 71.2 176 30.7
Gorai.009G452600 Gossypium raimondii HOM05D008437 ORTHO05D010577 4.3e-10 70.1 270 23.3
Hma1.2p1_0244F.1_g101190 Hydrangea macrophylla HOM05D008437 ORTHO05D010577 4.3e-10 70.1 238 26.1
Actinidia13258 Actinidia chinensis HOM05D007726 ORTHO05D008819 5.6e-10 69.7 290 27.2
Migut.B01776 Erythranthe guttata HOM05D006664 ORTHO05D009007 5.6e-10 69.7 76 52.6
Lj1A662G33 Lonicera japonica HOM05D000007 ORTHO05D000039 5.6e-10 69.7 373 24.1
PSO832G1004 Papaver somniferum HOM05D000007 ORTHO05D000676 7.4e-10 69.3 213 30.0
AUR62025056 Chenopodium quinoa HOM05D003636 ORTHO05D013299 9.6e-10 68.9 333 22.8
AUR62031665 Chenopodium quinoa HOM05D003636 ORTHO05D013299 1.6e-09 68.2 333 23.4
Lj6A74G24 Lonicera japonica HOM05D006664 ORTHO05D009007 1.6e-09 68.2 251 27.5
Gohir.D05G386150 Gossypium hirsutum HOM05D008437 ORTHO05D010577 3.7e-09 67.0 331 24.2
PSO063G5494 Papaver somniferum HOM05D000007 ORTHO05D000676 3.7e-09 67.0 206 28.6
SalBow4G1226 Salvia bowleyana HOM05D006664 ORTHO05D009007 3.7e-09 67.0 172 30.2
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 4.8e-09 66.6 298 25.8
PSO210G7490 Papaver somniferum HOM05D000007 ORTHO05D000676 4.8e-09 66.6 245 24.1
Atru.chr8.2149 Acer truncatum HOM05D008437 ORTHO05D010577 6.2e-09 66.2 416 22.8
Gohir.A04G003750 Gossypium hirsutum HOM05D008437 ORTHO05D010577 8.1e-09 65.9 257 24.5
Rhsim05G0205500 Rhododendron simsii HOM05D008437 ORTHO05D010577 8.1e-09 65.9 257 24.5
Actinidia22323 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.1e-08 65.5 288 24.3
Aqoxy5G04107 Aquilegia oxysepala HOM05D006664 ORTHO05D008819 1.4e-08 65.1 307 23.8
PSO017G6932 Papaver somniferum HOM05D000007 ORTHO05D000676 1.8e-08 64.7 221 26.2
PSO675G2097 Papaver somniferum HOM05D000007 ORTHO05D000676 1.8e-08 64.7 303 24.1
PSO832G3813 Papaver somniferum HOM05D000007 ORTHO05D000676 1.8e-08 64.7 244 23.4
PSO063G2625 Papaver somniferum HOM05D000007 ORTHO05D000676 2.4e-08 64.3 243 25.9
arahy.Tifrunner.gnm1.ann1.72JBMR Arachis hypogaea HOM05D008547 ORTHO05D010515 3.1e-08 63.9 238 26.1
arahy.Tifrunner.gnm1.ann1.MSS51R Arachis hypogaea HOM05D008547 ORTHO05D010515 4.0e-08 63.5 235 25.1
Lj6A793G95 Lonicera japonica HOM05D006664 ORTHO05D009007 4.0e-08 63.5 308 24.0
SalBow1G1070 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.0e-08 63.5 233 26.6
Atru.chr12.2365 Acer truncatum HOM05D000007 ORTHO05D000039 5.3e-08 63.2 255 24.7
Atru.chr8.2191 Acer truncatum HOM05D008437 ORTHO05D010577 5.3e-08 63.2 416 22.4
PSO675G1361 Papaver somniferum HOM05D000007 ORTHO05D000676 5.3e-08 63.2 211 29.4
Ciclev10020327m.g Citrus clementina HOM05D007726 ORTHO05D008819 6.9e-08 62.8 271 25.1
PSO513G0121 Papaver somniferum HOM05D000007 ORTHO05D000676 6.9e-08 62.8 266 25.2
arahy.Tifrunner.gnm1.ann1.WH98T7 Arachis hypogaea HOM05D000007 ORTHO05D000017 9.0e-08 62.4 347 23.6
Cc05_g06410 Coffea canephora HOM05D000007 ORTHO05D000039 9.0e-08 62.4 332 25.0
PSO541G1673 Papaver somniferum HOM05D000007 ORTHO05D000676 9.0e-08 62.4 263 24.3
Actinidia13257 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.2e-07 62.0 256 24.6
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 1.2e-07 62.0 244 27.5
PSO063G1670 Papaver somniferum HOM05D000007 ORTHO05D000676 1.2e-07 62.0 203 26.1
Aqoxy1G03138 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 1.5e-07 61.6 182 30.2
AUR62032924 Chenopodium quinoa HOM05D003636 ORTHO05D013299 1.5e-07 61.6 358 22.3
DCAR_028831 Daucus carota HOM05D008437 ORTHO05D010577 1.5e-07 61.6 259 24.3
Oeu000542.1 Olea europaea HOM05D007726 ORTHO05D008819 1.5e-07 61.6 254 24.8
PSO017G6217 Papaver somniferum HOM05D000007 ORTHO05D000676 1.5e-07 61.6 230 27.0
PSO675G7439 Papaver somniferum HOM05D000007 ORTHO05D000676 1.5e-07 61.6 236 26.7
Peaxi162Scf00541g00017 Petunia axillaris HOM05D000007 ORTHO05D000017 1.5e-07 61.6 319 25.4
SalBow1G2214 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.5e-07 61.6 49 59.2
DCAR_008113 Daucus carota HOM05D008179 ORTHO05D009362 2.0e-07 61.2 240 25.8
PSO013G0363 Papaver somniferum HOM05D000007 ORTHO05D000676 2.0e-07 61.2 251 25.9
PSO675G3185 Papaver somniferum HOM05D000007 ORTHO05D000676 2.0e-07 61.2 236 28.0
PSO832G2280 Papaver somniferum HOM05D000007 ORTHO05D000676 2.0e-07 61.2 320 24.7
Aqoxy2G00197 Aquilegia oxysepala HOM05D000007 ORTHO05D007631 2.6e-07 60.8 254 24.4
PSO081G0144 Papaver somniferum HOM05D000007 ORTHO05D000676 2.6e-07 60.8 249 22.5
Aqoxy4G03265 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 3.4e-07 60.5 179 30.7
PSO357G0199 Papaver somniferum HOM05D000007 ORTHO05D000676 3.4e-07 60.5 248 23.0
Lj8A0T14 Lonicera japonica HOM05D000007 ORTHO05D000521 4.5e-07 60.1 282 26.6
PSO541G5431 Papaver somniferum HOM05D000007 ORTHO05D000676 4.5e-07 60.1 255 25.1
FAN02G3393 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.8e-07 59.7 253 23.3
PSO675G3972 Papaver somniferum HOM05D000007 ORTHO05D000676 7.6e-07 59.3 336 25.9
COL.COLO4_07287 Corchorus olitorius HOM05D000007 ORTHO05D000039 9.9e-07 58.9 325 25.2
Aqoxy1G02131 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 1.7e-06 58.2 301 23.6
AT4G04690 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.7e-06 58.2 186 29.0
PSO017G1882 Papaver somniferum HOM05D000007 ORTHO05D000676 1.7e-06 58.2 192 28.1
Dinv17447 Davidia involucrata HOM05D000007 ORTHO05D000676 2.2e-06 57.8 257 25.3
PSO013G0166 Papaver somniferum HOM05D000007 ORTHO05D000676 2.2e-06 57.8 128 31.2
PSO170G4704 Papaver somniferum HOM05D000007 ORTHO05D000676 2.2e-06 57.8 247 23.1
PSO386G0261 Papaver somniferum HOM05D000007 ORTHO05D000676 2.2e-06 57.8 209 29.2
PSO675G5696 Papaver somniferum HOM05D000007 ORTHO05D000017 2.2e-06 57.8 251 25.1
PSO782G2971 Papaver somniferum HOM05D000007 ORTHO05D000676 2.2e-06 57.8 236 22.9
Lj8C594T5 Lonicera japonica HOM05D000007 ORTHO05D000521 2.9e-06 57.4 301 24.9
PSO063G2998 Papaver somniferum HOM05D000007 ORTHO05D000676 2.9e-06 57.4 204 26.0
PSO832G1314 Papaver somniferum HOM05D000007 ORTHO05D000676 2.9e-06 57.4 242 24.8
Dinv24637 Davidia involucrata HOM05D007726 ORTHO05D008819 4.9e-06 56.6 268 23.5
PSO675G5716 Papaver somniferum HOM05D000007 ORTHO05D000676 4.9e-06 56.6 237 25.7
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.9e-06 56.6 235 26.4
Atru.chr8.2143 Acer truncatum HOM05D008437 ORTHO05D010577 6.4e-06 56.2 248 22.2
CSS0013132 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 6.4e-06 56.2 255 23.1
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 6.4e-06 56.2 181 25.4
PSO266G0050 Papaver somniferum HOM05D000007 ORTHO05D000017 6.4e-06 56.2 271 25.8
QL04p036868 Quercus lobata HOM05D000007 ORTHO05D000039 6.4e-06 56.2 266 23.7
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.4e-06 55.8 239 25.5


User provided reference genes

Program Settings