Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 3.3e-180 634.8 297 100.0
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.9e-119 433.0 295 65.8
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 2.1e-113 412.9 298 63.4
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 1.3e-112 410.2 297 62.6
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 1.7e-112 409.8 288 63.5
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 4.3e-111 405.2 290 62.1
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 7.3e-111 404.4 284 63.7
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 4.7e-110 401.7 285 62.8
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.0e-108 396.4 285 61.8
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 2.2e-107 392.9 286 61.2
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 3.8e-107 392.1 287 61.7
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 4.9e-107 391.7 283 62.2
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 6.4e-107 391.3 287 62.4
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 8.4e-107 391.0 287 59.9
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 1.4e-106 390.2 292 59.6
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 2.4e-106 389.4 295 60.7
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.4e-106 389.4 284 62.3
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 3.2e-106 389.0 293 60.1
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 3.5e-105 385.6 288 60.1
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 2.5e-103 379.4 287 60.3
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.6e-102 376.7 295 59.3
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 2.8e-102 375.9 293 57.3
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 2.8e-102 375.9 287 59.6
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 3.6e-102 375.6 287 59.2
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.4e-101 373.6 296 58.1
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 1.8e-101 373.2 285 59.6
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 5.3e-101 371.7 295 57.3
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 5.3e-101 371.7 295 57.3
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 5.3e-101 371.7 297 55.9
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 6.9e-101 371.3 288 57.6
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 9.0e-101 370.9 288 58.0
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.2e-100 370.5 289 58.8
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 1.2e-100 370.5 289 60.2
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 1.5e-100 370.2 288 57.6
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.5e-100 370.2 288 58.3
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 4.4e-100 368.6 274 61.3
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 1.3e-99 367.1 299 55.5
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 1.1e-98 364.0 267 59.6
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.4e-98 363.6 299 56.5
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 2.1e-97 359.8 285 57.2
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 3.5e-97 359.0 270 58.5
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 7.8e-97 357.8 267 62.9
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 5.6e-95 351.7 292 53.1
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 7.3e-95 351.3 289 53.6
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 2.1e-94 349.7 228 73.7
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 4.8e-94 348.6 285 57.2
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 6.2e-94 348.2 283 55.5
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 3.1e-93 345.9 280 55.4
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.2e-92 344.0 276 59.4
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 2.0e-92 343.2 280 56.8
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 3.4e-92 342.4 287 53.0
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.7e-91 340.1 295 55.6
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 2.4e-90 336.3 237 63.7
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 2.4e-90 336.3 277 54.2
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 1.1e-87 327.4 243 60.5
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 9.6e-87 324.3 276 53.3
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 2.8e-86 322.8 259 57.9
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 3.1e-85 319.3 281 50.2
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 1.9e-82 310.1 234 58.1
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.0e-77 292.4 319 46.4
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 2.0e-76 290.0 272 47.4
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 2.2e-75 286.6 376 43.1
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 8.4e-75 284.6 242 55.8
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 1.1e-69 267.7 232 53.4
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 2.6e-68 263.1 286 44.1
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 2.2e-67 260.0 211 55.5
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 3.0e-64 249.6 278 41.7
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 1.7e-62 243.8 273 38.5
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 3.7e-62 242.7 288 45.8
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 8.2e-62 241.5 202 54.5
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 3.4e-60 236.1 276 38.8
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 1.7e-59 233.8 231 49.4
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 1.1e-55 221.1 229 48.0
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 3.7e-46 189.5 228 43.9
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 2.2e-38 163.7 135 54.8
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 2.7e-33 146.7 108 59.3
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 5.2e-32 142.5 370 28.6
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.7e-30 137.5 107 57.0
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.1e-21 108.2 63 73.0
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 7.8e-20 102.1 181 33.7
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 1.3e-14 84.7 70 55.7
Zm00001eb340470 Zea mays HOM05D007847 ORTHO05D009946 1.5e-07 61.2 55 49.1


User provided reference genes

Program Settings