Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 3.0e-72 275.0 134 100.0
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 8.0e-49 197.2 134 76.9
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 2.0e-47 192.6 134 73.9
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 7.5e-47 190.7 136 72.1
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 9.8e-47 190.3 134 73.1
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 9.8e-47 190.3 131 71.0
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 1.3e-46 189.9 132 72.0
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 1.7e-46 189.5 134 72.4
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 1.7e-46 189.5 134 73.9
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 4.9e-46 188.0 134 70.9
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 6.3e-46 187.6 134 69.4
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 6.3e-46 187.6 134 70.1
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 6.3e-46 187.6 134 70.9
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 6.3e-46 187.6 134 70.1
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 8.3e-46 187.2 134 70.1
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 8.3e-46 187.2 132 71.2
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 8.3e-46 187.2 135 69.6
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 8.3e-46 187.2 134 70.1
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 1.4e-45 186.4 134 70.1
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 1.8e-45 186.0 134 70.1
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.8e-45 186.0 134 70.1
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.8e-45 186.0 134 70.1
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.8e-45 186.0 134 70.1
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.8e-45 186.0 134 70.1
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 2.4e-45 185.7 134 69.4
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 2.4e-45 185.7 131 71.0
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 2.4e-45 185.7 134 70.1
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.1e-45 185.3 134 69.4
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 3.1e-45 185.3 134 69.4
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 3.1e-45 185.3 134 69.4
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 3.1e-45 185.3 131 71.0
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 3.1e-45 185.3 131 70.2
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 4.1e-45 184.9 133 70.7
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 4.1e-45 184.9 134 69.4
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 4.1e-45 184.9 134 69.4
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 5.4e-45 184.5 131 69.5
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 5.4e-45 184.5 131 69.5
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 5.4e-45 184.5 131 69.5
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 5.4e-45 184.5 131 69.5
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 7.0e-45 184.1 131 70.2
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 7.0e-45 184.1 131 71.0
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 7.0e-45 184.1 134 67.9
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 7.0e-45 184.1 134 69.4
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 9.1e-45 183.7 131 69.5
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 9.1e-45 183.7 135 67.4
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 9.1e-45 183.7 133 67.7
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 1.2e-44 183.3 131 70.2
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.2e-44 183.3 134 68.7
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.2e-44 183.3 131 68.7
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 1.2e-44 183.3 131 70.2
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 1.2e-44 183.3 131 69.5
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.6e-44 183.0 134 67.9
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 1.6e-44 183.0 129 70.5
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 1.6e-44 183.0 131 69.5
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 1.6e-44 183.0 129 70.5
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 2.0e-44 182.6 131 70.2
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.0e-44 182.6 134 69.4
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.0e-44 182.6 135 68.1
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 2.7e-44 182.2 134 68.7
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.7e-44 182.2 131 68.7
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.7e-44 182.2 135 67.4
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 2.7e-44 182.2 136 69.1
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 3.5e-44 181.8 131 70.2
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 4.5e-44 181.4 136 66.9
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 4.5e-44 181.4 129 69.8
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 5.9e-44 181.0 134 68.7
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 5.9e-44 181.0 134 67.2
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 5.9e-44 181.0 131 67.9
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 5.9e-44 181.0 134 67.9
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 7.7e-44 180.6 135 68.1
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 7.7e-44 180.6 136 67.6
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 7.7e-44 180.6 136 68.4
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 7.7e-44 180.6 136 69.1
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 7.7e-44 180.6 136 67.6
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 7.7e-44 180.6 131 70.2
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 1.0e-43 180.3 131 71.8
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 1.0e-43 180.3 129 70.5
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.0e-43 180.3 132 68.2
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.3e-43 179.9 136 68.4
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.3e-43 179.9 136 68.4
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.3e-43 179.9 136 68.4
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 1.3e-43 179.9 135 66.7
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.3e-43 179.9 136 68.4
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 1.7e-43 179.5 134 67.9
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.7e-43 179.5 131 68.7
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.7e-43 179.5 131 68.7
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 1.7e-43 179.5 131 70.2
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.7e-43 179.5 131 67.9
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 1.7e-43 179.5 137 71.5
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.7e-43 179.5 132 67.4
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 2.3e-43 179.1 133 66.9
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 2.3e-43 179.1 136 67.6
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 2.9e-43 178.7 131 68.7
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 2.9e-43 178.7 131 68.7
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.9e-43 178.7 131 68.7
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 3.8e-43 178.3 129 69.8
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 3.8e-43 178.3 132 69.7
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 5.0e-43 177.9 134 67.9
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 5.0e-43 177.9 129 67.4
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 5.0e-43 177.9 134 67.9
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 6.6e-43 177.6 131 68.7
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 6.6e-43 177.6 131 68.7
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 8.6e-43 177.2 131 67.2
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 8.6e-43 177.2 133 66.2
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 8.6e-43 177.2 133 63.9
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 8.6e-43 177.2 131 67.9
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 1.1e-42 176.8 131 69.5
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 1.9e-42 176.0 133 68.4
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 1.9e-42 176.0 129 67.4
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 1.9e-42 176.0 129 67.4
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 2.5e-42 175.6 135 68.1
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 3.3e-42 175.3 136 65.4
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 3.3e-42 175.3 127 66.1
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 4.2e-42 174.9 132 65.2
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 4.2e-42 174.9 131 67.2
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 5.6e-42 174.5 134 67.2
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 7.2e-42 174.1 136 64.7
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 1.6e-41 172.9 127 66.1
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.1e-41 172.6 135 65.2
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 6.1e-41 171.0 135 65.9
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.0e-40 170.2 131 64.1
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 2.3e-40 169.1 129 65.9
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.0e-40 168.7 104 78.8
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 5.2e-40 167.9 135 63.7
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 5.2e-40 167.9 123 65.9
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 1.7e-38 162.9 122 67.2
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 4.9e-38 161.4 110 71.8
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 4.9e-38 161.4 120 68.3
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 1.1e-37 160.2 126 66.7
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 2.4e-37 159.1 120 67.5
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 5.4e-37 157.9 118 68.6
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 1.2e-36 156.8 81 86.4
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.2e-36 156.8 136 60.3
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 2.0e-36 156.0 131 63.4
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 2.0e-36 156.0 107 71.0
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.0e-36 156.0 115 68.7
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 2.7e-36 155.6 120 66.7
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.7e-35 152.9 133 54.1
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 2.3e-35 152.5 125 57.6
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 2.9e-35 152.1 115 67.0
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.9e-35 151.8 103 70.9
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 8.6e-35 150.6 103 68.9
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 2.8e-33 145.6 130 54.6
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 5.2e-32 141.4 109 67.9
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.7e-30 136.3 132 54.5
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.7e-30 136.3 88 77.3
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 2.0e-28 129.4 74 68.9
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 3.5e-28 128.6 125 51.2
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 4.6e-28 128.3 110 60.9
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 5.0e-27 124.8 106 62.3
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 6.6e-27 124.4 102 64.7
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 5.6e-26 121.3 134 51.5
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 4.7e-25 118.2 57 89.5
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 7.1e-21 104.4 79 55.7
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 7.1e-21 104.4 74 56.8
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.6e-20 103.2 76 67.1
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.7e-20 102.4 82 62.2
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 7.8e-20 100.9 135 45.2
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 1.0e-19 100.5 94 50.0
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.3e-14 83.6 43 86.0
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 3.0e-11 72.4 35 94.3
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.1e-09 66.2 32 87.5
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.8e-08 63.2 70 54.3
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 2.0e-07 59.7 35 74.3
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 3.4e-07 58.9 33 75.8


User provided reference genes

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