Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00312 Erythranthe guttata HOM05D001105 ORTHO05D001870 5.0e-107 391.7 300 100.0
MSTRG.10002 Avicennia marina HOM05D001105 ORTHO05D001870 4.7e-33 146.0 342 38.0
SalBow2G0923 Salvia bowleyana HOM05D001105 ORTHO05D001870 2.3e-32 143.7 332 39.5
SGA_v2.0_scaffold39G15299 Striga asiatica HOM05D001105 ORTHO05D001870 3.3e-26 123.2 319 38.9
Oeu044522.1 Olea europaea HOM05D001105 ORTHO05D001870 1.5e-23 114.4 327 34.9
Sopen01g031500 Solanum pennellii HOM05D001105 ORTHO05D001870 2.2e-22 110.5 272 41.2
CSS0018072 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D001870 6.4e-22 109.0 329 41.3
CSS0049503 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D001870 6.4e-22 109.0 329 41.3
Oeu004491.1 Olea europaea HOM05D001105 ORTHO05D001870 1.2e-20 104.8 329 38.3
Peaxi162Scf01336g00015 Petunia axillaris HOM05D001105 ORTHO05D001870 1.6e-20 104.4 284 39.8
Oeu030328.1 Olea europaea HOM05D001105 ORTHO05D001870 3.5e-20 103.2 330 32.4
Oeu029584.1 Olea europaea HOM05D001105 ORTHO05D001870 4.6e-20 102.8 327 32.4
SGA_v2.0_scaffold237G43801 Striga asiatica HOM05D001105 ORTHO05D001870 7.8e-20 102.1 164 42.7
PGSC0003DMG400009028 Solanum tuberosum HOM05D001105 ORTHO05D001870 1.7e-19 100.9 334 38.6
CAN.G69.20 Capsicum annuum HOM05D001105 ORTHO05D001870 1.3e-17 94.7 285 41.8
Dinv38413 Davidia involucrata HOM05D001105 ORTHO05D001870 1.4e-16 91.3 287 45.3
MSTRG.24751 Avicennia marina HOM05D001105 ORTHO05D001870 1.8e-16 90.9 268 34.0
Hma1.2p1_0995F.1_g245700 Hydrangea macrophylla HOM05D001105 ORTHO05D001870 9.0e-16 88.6 275 32.4
Haze_00938 Corylus avellana HOM05D001105 ORTHO05D001870 1.2e-15 88.2 161 42.2
CANSAT78G0215 Cannabis sativa HOM05D001105 ORTHO05D001870 3.4e-15 86.7 280 35.0
Cc03_g03370 Coffea canephora HOM05D001105 ORTHO05D001870 3.4e-15 86.7 280 33.2
Thecc.04G226200 Theobroma cacao HOM05D001105 ORTHO05D001870 5.8e-15 85.9 279 39.8
Actinidia23497 Actinidia chinensis HOM05D001105 ORTHO05D001870 1.3e-14 84.7 208 36.1
Sabra08G0113700 Salix brachista HOM05D001105 ORTHO05D001870 1.3e-14 84.7 168 41.7
Cfa015607 Carpinus fangiana HOM05D001105 ORTHO05D001870 2.9e-14 83.6 163 39.9
Peaxi162Scf00769g00043 Petunia axillaris HOM05D001105 ORTHO05D001870 4.9e-14 82.8 336 33.9
GSVIVG01017917001 Vitis vinifera HOM05D001105 ORTHO05D001870 8.4e-14 82.0 277 38.3
Nitab4.5_0006145g0010 Nicotiana tabacum HOM05D001105 ORTHO05D001870 1.1e-13 81.6 284 40.1
QL06p003612 Quercus lobata HOM05D001105 ORTHO05D001870 1.4e-13 81.3 175 38.3
Potri.008G149600 Populus trichocarpa HOM05D001105 ORTHO05D001870 3.2e-13 80.1 276 33.3
DCAR_030614 Daucus carota HOM05D001105 ORTHO05D001870 4.2e-13 79.7 276 31.9
Duzib151G0714 Durio zibethinus HOM05D001105 ORTHO05D001870 4.2e-13 79.7 274 33.6
Potri.010G091800 Populus trichocarpa HOM05D001105 ORTHO05D001870 4.2e-13 79.7 275 33.8
HanXRQChr09g0250261 Helianthus annuus HOM05D001105 ORTHO05D001870 5.4e-13 79.3 245 30.6
CiPaw.01G162700 Carya illinoinensis HOM05D001105 ORTHO05D001870 7.1e-13 79.0 171 39.2
Sc13g0004160 Simmondsia chinensis HOM05D001105 ORTHO05D001870 7.1e-13 79.0 243 37.0
Duzib212G0111 Durio zibethinus HOM05D001105 ORTHO05D001870 1.2e-12 78.2 171 36.8
Atru.chr4.2524 Acer truncatum HOM05D001105 ORTHO05D001870 2.1e-12 77.4 276 43.8
COL.COLO4_05832 Corchorus olitorius HOM05D001105 ORTHO05D001870 2.7e-12 77.0 288 38.2
Rhsim04G0204100 Rhododendron simsii HOM05D001105 ORTHO05D001870 4.6e-12 76.3 255 33.3
Nitab4.5_0000321g0040 Nicotiana tabacum HOM05D001105 ORTHO05D001870 6.0e-12 75.9 170 35.9
DCAR_002399 Daucus carota HOM05D001105 ORTHO05D001870 7.9e-12 75.5 258 29.8
Sabra10G0051500 Salix brachista HOM05D001105 ORTHO05D001870 1.8e-11 74.3 266 33.8
Manes.15G025700 Manihot esculenta HOM05D001105 ORTHO05D001870 3.0e-11 73.6 301 37.2
Manes.03G181900 Manihot esculenta HOM05D001105 ORTHO05D001870 3.9e-11 73.2 170 35.3
Lsat_1_v5_gn_7_66720 Lactuca sativa HOM05D001105 ORTHO05D001870 5.1e-11 72.8 244 31.1
CsaV3_6G038310 Cucumis sativus L. HOM05D001105 ORTHO05D001870 1.1e-10 71.6 159 42.1
Medtr1g105360 Medicago truncatula HOM05D001105 ORTHO05D001870 1.1e-10 71.6 279 30.8
Glyma.19G155800 Glycine max HOM05D001105 ORTHO05D001870 2.5e-10 70.5 157 34.4
Psat6g209920 Pisum sativum HOM05D001105 ORTHO05D001870 2.5e-10 70.5 163 35.0
vmacro02568 Vaccinium macrocarpon HOM05D001105 ORTHO05D001870 2.5e-10 70.5 169 36.1
Nitab4.5_0000458g0040 Nicotiana tabacum HOM05D001105 ORTHO05D001870 4.3e-10 69.7 162 34.6
Dinv44502 Davidia involucrata HOM05D001105 ORTHO05D001870 9.6e-10 68.6 161 39.8
Lsat_1_v5_gn_5_74260 Lactuca sativa HOM05D001105 ORTHO05D001870 9.6e-10 68.6 202 30.2
TPR.G5460 Trifolium pratense HOM05D001105 ORTHO05D001870 9.6e-10 68.6 162 35.2
Ciclev10021186m.g Citrus clementina HOM05D001105 ORTHO05D001870 1.3e-09 68.2 272 38.2
MELO3C014495.2 Cucumis melo HOM05D001105 ORTHO05D001870 1.3e-09 68.2 159 41.5
CiPaw.02G094400 Carya illinoinensis HOM05D001105 ORTHO05D001870 1.6e-09 67.8 295 33.6
Glyma.03G153400 Glycine max HOM05D001105 ORTHO05D001870 1.6e-09 67.8 155 38.7
Ca_10967_v3 Cicer arietinum L. HOM05D001105 ORTHO05D001870 2.1e-09 67.4 285 38.9
TAR365G0527 Trochodendron aralioides HOM05D001105 ORTHO05D001870 2.1e-09 67.4 168 35.7
VMungo1215G0742 Vigna mungo HOM05D001105 ORTHO05D001870 2.1e-09 67.4 159 35.8
ClCG06G005960 Citrullus lanatus HOM05D001105 ORTHO05D001870 2.8e-09 67.0 159 41.5
Psat6g209440 Pisum sativum HOM05D001105 ORTHO05D001870 2.8e-09 67.0 160 34.4
RcHm_v2.0_Chr4g0417161 Rosa chinensis HOM05D001105 ORTHO05D001870 2.8e-09 67.0 279 29.7
Nitab4.5_0000630g0170 Nicotiana tabacum HOM05D001105 ORTHO05D001870 3.6e-09 66.6 155 53.5
CSS0029817 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D001870 4.8e-09 66.2 289 29.4
Dinv32938 Davidia involucrata HOM05D001105 ORTHO05D001870 4.8e-09 66.2 164 34.8
Gohir.A12G005200 Gossypium hirsutum HOM05D001105 ORTHO05D001870 4.8e-09 66.2 176 38.6
Gohir.D12G004700 Gossypium hirsutum HOM05D001105 ORTHO05D001870 4.8e-09 66.2 176 39.2
Gorai.008G004600 Gossypium raimondii HOM05D001105 ORTHO05D001870 4.8e-09 66.2 176 38.6
Thecc.01G279800 Theobroma cacao HOM05D001105 ORTHO05D001870 4.8e-09 66.2 167 33.5
unitig_32.g10808 Utricularia gibba HOM05D001105 ORTHO05D001870 4.8e-09 66.2 194 32.0
Lj1g0027615 Lotus japonicus HOM05D001105 ORTHO05D001870 6.2e-09 65.9 253 29.2
Rhsim13G0024500 Rhododendron simsii HOM05D001105 ORTHO05D001870 6.2e-09 65.9 246 39.4
Aqoxy2G03325 Aquilegia oxysepala HOM05D001105 ORTHO05D001870 8.1e-09 65.5 275 27.3
Ciclev10005417m.g Citrus clementina HOM05D001105 ORTHO05D001870 1.1e-08 65.1 280 42.1
Gohir.D09G216300 Gossypium hirsutum HOM05D001105 ORTHO05D001870 1.1e-08 65.1 226 29.2
Gorai.006G236700 Gossypium raimondii HOM05D001105 ORTHO05D001870 1.1e-08 65.1 171 33.3
Nitab4.5_0000759g0130 Nicotiana tabacum HOM05D001105 ORTHO05D001870 1.1e-08 65.1 170 31.8
MBI19_g16317_MAGBIO Magnolia biondii HOM05D001105 ORTHO05D001870 1.4e-08 64.7 252 28.6
CAN.G1682.22 Capsicum annuum HOM05D001105 ORTHO05D001870 1.8e-08 64.3 170 32.9
TWI09G1192 Tripterygium wilfordii HOM05D001105 ORTHO05D001870 1.8e-08 64.3 223 30.5
Atru.chr5.1433 Acer truncatum HOM05D001105 ORTHO05D001870 2.4e-08 63.9 173 33.5
CAN.G873.7 Capsicum annuum HOM05D001105 ORTHO05D001870 2.4e-08 63.9 306 33.0
COL.COLO4_09100 Corchorus olitorius HOM05D001105 ORTHO05D001870 2.4e-08 63.9 281 40.9
VMungo0720G2733 Vigna mungo HOM05D001105 ORTHO05D001870 2.4e-08 63.9 163 33.7
PSO170G3767 Papaver somniferum HOM05D001105 ORTHO05D001870 3.1e-08 63.5 165 35.8
Phvul.007G171900 Phaseolus vulgaris HOM05D001105 ORTHO05D001870 3.1e-08 63.5 163 35.0
Solyc06g054310.1 Solanum lycopersicum HOM05D001105 ORTHO05D001870 3.1e-08 63.5 239 30.1
Haze_04713 Corylus avellana HOM05D001105 ORTHO05D001870 4.0e-08 63.2 164 32.3
Eucgr.H01483 Eucalyptus grandis HOM05D001105 ORTHO05D001870 4.0e-08 63.2 172 34.3
FvH4_4g14940 Fragaria vesca HOM05D001105 ORTHO05D001870 4.0e-08 63.2 165 34.5
FAN12G2450 Fragaria x ananassa HOM05D001105 ORTHO05D001870 4.0e-08 63.2 165 34.5
Gohir.A09G213800 Gossypium hirsutum HOM05D001105 ORTHO05D001870 4.0e-08 63.2 161 32.3
CSS0044577 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D001870 5.3e-08 62.8 203 31.5
Glyma.20G143000 Glycine max HOM05D001105 ORTHO05D001870 5.3e-08 62.8 271 31.7
Nitab4.5_0008797g0040 Nicotiana tabacum HOM05D001105 ORTHO05D001870 5.3e-08 62.8 171 32.2
Prupe.1G154300 Prunus persica HOM05D001105 ORTHO05D001870 5.3e-08 62.8 285 33.3
TAR623G1713 Trochodendron aralioides HOM05D001105 ORTHO05D003643 5.3e-08 62.8 145 36.6
FAN24G3176 Fragaria x ananassa HOM05D001105 ORTHO05D001870 9.0e-08 62.0 277 34.7
Hma1.2p1_0434F.1_g152200 Hydrangea macrophylla HOM05D001105 ORTHO05D001870 9.0e-08 62.0 276 35.5
Hund12169 Selenicereus undatus HOM05D001105 ORTHO05D001870 9.0e-08 62.0 145 34.5
Duzib138G1156 Durio zibethinus HOM05D001105 ORTHO05D001870 1.2e-07 61.6 275 31.3
FAN17G2206 Fragaria x ananassa HOM05D001105 ORTHO05D001870 1.2e-07 61.6 162 34.0
FAN22G2240 Fragaria x ananassa HOM05D001105 ORTHO05D001870 1.2e-07 61.6 162 34.0
Peaxi162Scf00783g00032 Petunia axillaris HOM05D001105 ORTHO05D001870 1.2e-07 61.6 273 33.7
Peaxi162Scf01607g00012 Petunia axillaris HOM05D001105 ORTHO05D001870 1.2e-07 61.6 162 34.6
Psat4g211120 Pisum sativum HOM05D001105 ORTHO05D001870 1.2e-07 61.6 273 35.2
Actinidia00749 Actinidia chinensis HOM05D001105 ORTHO05D001870 1.5e-07 61.2 165 32.7
PSO302G0035 Papaver somniferum HOM05D001105 ORTHO05D001870 1.5e-07 61.2 165 34.5
Phvul.007G053800 Phaseolus vulgaris HOM05D001105 ORTHO05D001870 1.5e-07 61.2 169 32.5
Sopen06g019420 Solanum pennellii HOM05D001105 ORTHO05D001870 1.5e-07 61.2 243 37.4
Duzib211G0127 Durio zibethinus HOM05D001105 ORTHO05D001870 2.0e-07 60.8 163 33.1
FvH4_2g23620 Fragaria vesca HOM05D001105 ORTHO05D001870 2.0e-07 60.8 279 34.4
A10p20410 Brassica napus HOM05D001105 ORTHO05D001870 2.6e-07 60.5 164 32.3
BraA10t44111Z Brassica rapa HOM05D001105 ORTHO05D001870 2.6e-07 60.5 164 32.3
PGSC0003DMG400011821 Solanum tuberosum HOM05D001105 ORTHO05D001870 2.6e-07 60.5 242 35.1
Aa31LG11G10420 Aethionema arabicum HOM05D001105 ORTHO05D001870 3.4e-07 60.1 148 33.8
Cfa006135 Carpinus fangiana HOM05D001105 ORTHO05D001870 3.4e-07 60.1 164 31.1
Lj5g0001986 Lotus japonicus HOM05D001105 ORTHO05D001870 3.4e-07 60.1 292 28.1
Rhsim02G0022200 Rhododendron simsii HOM05D001105 ORTHO05D001870 3.4e-07 60.1 219 29.7
Actinidia40162 Actinidia chinensis HOM05D001105 ORTHO05D001870 4.5e-07 59.7 123 37.4
Aqoxy5G00506 Aquilegia oxysepala HOM05D001105 ORTHO05D001870 4.5e-07 59.7 271 35.1
FAN27G2256 Fragaria x ananassa HOM05D001105 ORTHO05D001870 4.5e-07 59.7 277 34.7
Lj3P741T21 Lonicera japonica HOM05D001105 ORTHO05D001870 4.5e-07 59.7 165 32.1
MD13G1186600 Malus domestica HOM05D001105 ORTHO05D001870 4.5e-07 59.7 171 34.5
MD16G1187300 Malus domestica HOM05D001105 ORTHO05D001870 4.5e-07 59.7 288 35.4
Manes.05G076000 Manihot esculenta HOM05D001105 ORTHO05D001870 4.5e-07 59.7 280 26.8
Medtr5g005770 Medicago truncatula HOM05D001105 ORTHO05D001870 4.5e-07 59.7 244 26.2
Rhsim01G0274700 Rhododendron simsii HOM05D001478 ORTHO05D008790 4.5e-07 59.7 164 31.1
TAR633G0419 Trochodendron aralioides HOM05D001105 ORTHO05D001870 4.5e-07 59.7 316 31.0
EL10As3g23327 Beta vulgaris HOM05D001105 ORTHO05D001870 5.8e-07 59.3 145 32.4
Ca_08580_v3 Cicer arietinum L. HOM05D001105 ORTHO05D001870 5.8e-07 59.3 158 31.0
unitig_749.g14069 Utricularia gibba HOM05D001105 ORTHO05D001870 5.8e-07 59.3 128 38.3
VMungo1383G0841 Vigna mungo HOM05D001105 ORTHO05D001870 5.8e-07 59.3 159 36.5
Glyma.10G026300 Glycine max HOM05D001105 ORTHO05D001870 7.6e-07 58.9 163 33.1
Phvul.002G047700 Phaseolus vulgaris HOM05D001105 ORTHO05D001870 7.6e-07 58.9 160 32.5
AUR62043169 Chenopodium quinoa HOM05D001105 ORTHO05D001870 9.9e-07 58.5 279 33.0
Ca_24375_v3 Cicer arietinum L. HOM05D001105 ORTHO05D001870 9.9e-07 58.5 237 38.8
Glyma.02G147500 Glycine max HOM05D001105 ORTHO05D001870 9.9e-07 58.5 157 31.8
Lj1g0015154 Lotus japonicus HOM05D001105 ORTHO05D001870 9.9e-07 58.5 166 31.9
Sp6g25150 Schrenkiella parvula HOM05D001105 ORTHO05D001870 9.9e-07 58.5 171 30.4
VMungo0720G0888 Vigna mungo HOM05D001105 ORTHO05D001870 9.9e-07 58.5 158 32.9
PGR142G1445 Punica granatum HOM05D001105 ORTHO05D001870 1.3e-06 58.2 139 36.7
THA.LOC104801234 Tarenaya hassleriana HOM05D001105 ORTHO05D001870 1.3e-06 58.2 267 33.3
TWI14G0758 Tripterygium wilfordii HOM05D001105 ORTHO05D001870 1.3e-06 58.2 169 30.8
TWI73G1145 Tripterygium wilfordii HOM05D001105 ORTHO05D001870 1.3e-06 58.2 269 32.0
BcaC04g18586 Brassica carinata HOM05D001105 ORTHO05D001870 1.7e-06 57.8 167 31.1
C09p57020 Brassica napus HOM05D001105 ORTHO05D001870 1.7e-06 57.8 167 31.1
BolC9t58569H Brassica oleracea HOM05D001105 ORTHO05D001870 1.7e-06 57.8 164 31.1
Lalb_Chr02g0142791 Lupinus albus HOM05D001105 ORTHO05D001870 1.7e-06 57.8 176 32.4
Medtr1g105075 Medicago truncatula HOM05D001105 ORTHO05D001870 1.7e-06 57.8 166 32.5
Peaxi162Scf00161g00111 Petunia axillaris HOM05D001105 ORTHO05D001870 1.7e-06 57.8 275 29.8
THA.LOC104823093 Tarenaya hassleriana HOM05D001105 ORTHO05D001870 1.7e-06 57.8 158 30.4
GSVIVG01024498001 Vitis vinifera HOM05D001105 ORTHO05D001870 1.7e-06 57.8 270 37.4
Eucgr.H01485 Eucalyptus grandis HOM05D001105 ORTHO05D001870 2.2e-06 57.4 165 32.7
FAN20G3052 Fragaria x ananassa HOM05D001105 ORTHO05D001870 2.2e-06 57.4 281 32.0
Glyma.10G250700 Glycine max HOM05D001105 ORTHO05D001870 2.2e-06 57.4 276 31.5
MBI17_g45764_MAGBIO Magnolia biondii HOM05D001105 ORTHO05D001870 2.2e-06 57.4 267 27.7
RcHm_v2.0_Chr6g0291081 Rosa chinensis HOM05D001105 ORTHO05D001870 2.2e-06 57.4 282 33.0
Actinidia36983 Actinidia chinensis HOM05D001105 ORTHO05D001870 2.9e-06 57.0 131 35.1
FAN07G1906 Fragaria x ananassa HOM05D001105 ORTHO05D001870 2.9e-06 57.0 270 31.9
FAN15G2811 Fragaria x ananassa HOM05D001105 ORTHO05D001870 2.9e-06 57.0 277 34.7
FAN27G3210 Fragaria x ananassa HOM05D001105 ORTHO05D001870 2.9e-06 57.0 277 32.9
Gohir.A08G067600 Gossypium hirsutum HOM05D001105 ORTHO05D001870 2.9e-06 57.0 161 29.8
PGR004G0344 Punica granatum HOM05D001105 ORTHO05D001870 2.9e-06 57.0 134 36.6
THA.LOC104818809 Tarenaya hassleriana HOM05D001105 ORTHO05D001870 2.9e-06 57.0 164 32.3
TAR636G1608 Trochodendron aralioides HOM05D001105 ORTHO05D001870 2.9e-06 57.0 270 33.3
BcaB08g36590 Brassica carinata HOM05D001105 ORTHO05D001870 3.8e-06 56.6 158 32.9
Manes.01G207900 Manihot esculenta HOM05D001105 ORTHO05D001870 3.8e-06 56.6 273 33.7
CsaV3_3G013540 Cucumis sativus L. HOM05D001105 ORTHO05D001870 4.9e-06 56.2 138 34.8
Lj5g0002837 Lotus japonicus HOM05D001105 ORTHO05D001870 4.9e-06 56.2 159 32.7
TWI23G0440 Tripterygium wilfordii HOM05D001105 ORTHO05D001870 4.9e-06 56.2 170 30.6
Nitab4.5_0003538g0010 Nicotiana tabacum HOM05D001105 ORTHO05D001870 6.4e-06 55.8 160 33.1
Sed0008439 Sechium edule HOM05D001105 ORTHO05D001870 6.4e-06 55.8 159 34.0
Cc01_g19510 Coffea canephora HOM05D001105 ORTHO05D001870 8.4e-06 55.5 145 31.7
DCAR_027170 Daucus carota HOM05D001105 ORTHO05D001870 8.4e-06 55.5 206 30.1
Migut.O00517 Erythranthe guttata HOM05D001105 ORTHO05D001870 8.4e-06 55.5 150 32.0


User provided reference genes

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