Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 0.0e+00 2670.2 1335 100.0
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 0.0e+00 1488.0 1413 59.6
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 0.0e+00 1486.5 1417 59.4
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 0.0e+00 1454.1 1353 59.9
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 1.5e-243 847.4 1371 41.7
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 2.4e-214 750.4 1380 37.8
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 5.4e-214 749.2 1396 37.8
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 1.1e-211 741.5 1666 34.3
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 1.5e-211 741.1 1656 35.1
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 2.5e-211 740.3 1656 34.6
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 4.3e-211 739.6 1659 35.0
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 4.8e-210 736.1 1464 37.6
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 8.1e-210 735.3 1423 37.2
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 3.8e-207 726.5 1390 37.8
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 1.1e-203 714.9 1651 33.7
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 1.6e-202 711.1 1635 34.1
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 4.5e-200 703.0 1432 37.1
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 1.7e-199 701.0 1417 37.0
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 2.2e-199 700.7 1600 34.5
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 2.3e-196 690.6 1380 36.7
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.1e-193 681.8 1422 36.6
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 5.3e-193 679.5 1422 36.4
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.0e-191 675.2 1462 35.8
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 1.0e-191 675.2 1467 35.0
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 1.3e-191 674.9 1682 32.6
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 1.7e-191 674.5 1475 35.1
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 2.2e-191 674.1 1491 34.7
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 6.7e-188 662.5 1631 32.6
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 6.7e-188 662.5 1422 36.6
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.7e-187 659.4 1440 36.2
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.6e-186 657.9 1371 36.5
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 3.1e-185 653.7 1607 33.2
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 6.5e-183 646.0 1606 33.8
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 1.3e-178 631.7 1625 32.1
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 1.5e-176 624.8 1399 35.0
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 6.5e-175 619.4 1359 35.8
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 1.2e-173 615.1 1382 35.5
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 1.2e-168 598.6 1672 31.4
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 9.4e-166 589.0 737 46.9
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 2.7e-165 587.4 1388 33.9
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 3.7e-162 577.0 1698 30.6
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 1.9e-158 564.7 745 46.6
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 1.2e-157 562.0 1290 33.8
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 1.6e-157 561.6 1376 32.0
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 2.3e-156 557.8 745 46.4
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 3.0e-156 557.4 1189 37.5
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 5.7e-155 553.1 1460 32.3
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 9.8e-155 552.4 1773 29.9
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 9.8e-155 552.4 1378 32.5
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 3.7e-154 550.4 1655 30.9
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 3.7e-154 550.4 1652 30.7
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 2.7e-152 544.3 733 45.2
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 7.7e-152 542.7 1341 32.7
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 1.3e-151 542.0 1505 32.1
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 2.9e-151 540.8 1680 29.9
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 1.1e-150 538.9 1701 29.6
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 2.1e-149 534.6 1714 29.2
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 6.3e-146 523.1 1633 29.2
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.4e-145 520.0 1010 38.4
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 5.0e-143 513.5 1750 29.4
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 1.9e-142 511.5 672 47.6
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 8.0e-141 506.1 1611 29.7
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 1.0e-140 505.8 1239 33.0
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 1.8e-140 505.0 1176 33.4
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 2.3e-140 504.6 1658 29.2
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 1.5e-139 501.9 1675 29.8
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 8.3e-138 496.1 1623 30.7
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 1.8e-137 495.0 1634 29.0
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 1.2e-136 492.3 1740 28.2
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 1.2e-136 492.3 1045 34.2
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 1.3e-135 488.8 1648 28.7
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 1.3e-135 488.8 1175 33.1
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 2.5e-134 484.6 1706 28.8
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 6.8e-132 476.5 737 42.7
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 7.5e-131 473.0 1687 29.5
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 1.1e-129 469.2 1666 28.2
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 3.2e-129 467.6 1660 28.2
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 7.0e-129 466.5 1656 28.8
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 2.0e-128 464.9 1654 28.4
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 3.9e-127 460.7 1666 26.9
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 1.1e-126 459.1 1664 28.1
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 2.8e-125 454.5 744 38.6
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 6.8e-124 449.9 1659 28.3
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 1.4e-121 442.2 1713 28.0
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 1.4e-121 442.2 1713 27.4
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 4.1e-121 440.7 1657 28.0
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 4.6e-120 437.2 1670 28.0
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 3.0e-119 434.5 657 43.7
MD01G1200800 Malus domestica HOM05D005579 ORTHO05D006775 8.1e-117 426.4 1071 32.3
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 5.8e-115 420.2 1663 27.5
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 9.9e-115 419.5 1649 27.7
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 1.3e-114 419.1 1738 27.6
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 1.4e-113 415.6 1584 28.2
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 9.2e-113 412.9 1740 27.0
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 2.6e-107 394.8 1713 26.7
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 3.2e-97 361.3 1281 28.3
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 8.1e-93 346.7 769 34.9
FAN10G0535 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.9e-66 258.5 503 38.6
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 6.7e-63 247.3 694 30.5
Haze_13711 Corylus avellana HOM05D005579 ORTHO05D006775 4.4e-62 244.6 474 36.7
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 6.3e-61 240.7 715 30.2
CDE08G0179 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 3.0e-55 221.9 587 31.3
Hund11748 Selenicereus undatus HOM05D005579 ORTHO05D006775 4.4e-54 218.0 499 34.9
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 7.4e-54 217.2 200 57.0
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.6e-51 209.5 404 36.1
Ca_25744_v3 Cicer arietinum L. HOM05D005579 ORTHO05D006775 1.8e-44 186.0 456 30.7
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 1.4e-39 169.9 153 58.8
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 8.8e-39 167.2 233 39.5
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 4.4e-38 164.9 833 25.9
MBI17_g46331_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 5.7e-38 164.5 284 36.6
Oeu024225.1 Olea europaea HOM05D002251 ORTHO05D006775 4.7e-32 144.8 354 34.5
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 4.4e-30 138.3 624 24.7
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 7.8e-27 127.5 271 31.0
Pp3c13_14750 Physcomitrium patens HOM05D005579 ORTHO05D006775 6.6e-26 124.4 227 35.7
TAR375G0314 Trochodendron aralioides HOM05D005579 ORTHO05D006775 4.7e-16 91.7 180 36.1
SalBow1G5008 Salvia bowleyana HOM05D045082 ORTHO05D006775 1.5e-14 86.7 74 58.1
SalBow1G5207 Salvia bowleyana HOM05D045082 ORTHO05D006775 1.5e-14 86.7 74 58.1
TPR.G17624 Trifolium pratense HOM05D005579 ORTHO05D006775 7.8e-11 74.3 144 31.9
MD01G1200900 Malus domestica HOM05D005579 ORTHO05D006775 1.3e-10 73.6 297 26.3
Dinv28442 Davidia involucrata HOM05D005579 ORTHO05D006775 4.0e-07 62.0 214 31.3
SEGI_30883 Sequoiadendron giganteum HOM05D005579 ORTHO05D006775 6.8e-07 61.2 233 27.0
TPR.G31959 Trifolium pratense HOM05D061576 ORTHO05D006775 2.6e-06 59.3 146 27.4


User provided reference genes

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