Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.2e-115 419.1 233 100.0
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.5e-55 220.3 246 54.1
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 4.9e-46 188.7 236 50.4
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 2.5e-42 176.4 249 46.2
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 7.4e-42 174.9 243 49.8
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 7.4e-42 174.9 243 49.8
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 3.3e-34 149.4 241 47.3
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 5.3e-32 142.1 261 41.8
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 6.9e-32 141.7 243 44.9
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 2.0e-31 140.2 254 39.0
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.2e-29 132.5 265 38.5
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 5.5e-29 132.1 266 39.1
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 1.6e-28 130.6 256 45.7
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.0e-27 127.9 258 38.0
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.0e-27 127.9 268 38.4
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 3.0e-27 126.3 268 37.7
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 6.7e-27 125.2 224 47.8
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.8e-24 117.1 261 37.2
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.8e-24 117.1 251 37.5
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 2.4e-24 116.7 232 40.5
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 3.1e-24 116.3 243 37.9
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 9.1e-24 114.8 246 35.4
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 2.0e-23 113.6 270 34.8
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.7e-22 110.5 233 38.2
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 5.0e-22 109.0 263 35.4
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 6.5e-22 108.6 253 36.0
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 6.5e-22 108.6 213 39.0
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 8.5e-22 108.2 186 40.9
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 1.4e-21 107.5 271 34.3
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 5.5e-21 105.5 295 37.3
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.2e-20 104.4 228 36.8
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.2e-20 104.4 262 34.7
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.6e-20 104.0 256 35.2
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.6e-20 104.0 216 36.1
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 1.6e-20 104.0 261 34.5
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.1e-20 103.6 254 32.7
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 8.0e-20 101.7 208 37.0
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.0e-19 101.3 249 33.7
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 2.6e-18 96.7 259 34.0
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 2.6e-18 96.7 255 32.9
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 2.6e-18 96.7 229 38.0
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 4.4e-18 95.9 255 32.9
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 5.7e-18 95.5 262 31.3
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 7.4e-18 95.1 215 35.8
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 9.7e-18 94.7 230 30.0
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.7e-17 94.0 265 32.1
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 2.2e-17 93.6 226 32.7
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.7e-17 92.8 189 39.2
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.7e-17 92.8 256 32.0
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 4.8e-17 92.4 230 33.0
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 8.2e-17 91.7 231 29.4
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 3.1e-16 89.7 256 31.6
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.1e-16 89.4 181 36.5
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 7.0e-16 88.6 261 31.4
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 1.6e-15 87.4 283 31.8
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.0e-15 87.0 247 31.6
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.6e-15 86.7 248 31.5
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 2.6e-15 86.7 243 31.3
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 4.5e-15 85.9 216 32.4
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 7.7e-15 85.1 247 31.6
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 2.2e-14 83.6 232 39.7
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.5e-13 80.1 254 29.9
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 5.5e-13 79.0 129 38.0
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 5.5e-13 79.0 262 27.5
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 9.4e-13 78.2 175 36.6
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 9.4e-13 78.2 253 30.8
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 9.4e-13 78.2 203 34.0
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 1.2e-12 77.8 215 38.6
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 6.1e-12 75.5 216 31.0
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 1.4e-11 74.3 258 27.9
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.3e-11 73.6 252 30.6
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 3.0e-11 73.2 244 31.1
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 3.0e-11 73.2 239 33.5
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 4.0e-11 72.8 119 34.5
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 2.0e-10 70.5 205 32.2
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.3e-10 69.7 108 40.7
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 3.3e-10 69.7 235 30.6
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 4.4e-10 69.3 237 31.2
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 9.7e-10 68.2 196 30.6
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 9.7e-10 68.2 254 29.5
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.3e-09 67.8 196 30.6
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 2.2e-09 67.0 276 29.7
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 2.8e-09 66.6 237 30.8
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 4.8e-09 65.9 246 29.3
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 6.3e-09 65.5 260 27.3
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 8.2e-09 65.1 225 28.4
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 1.4e-08 64.3 268 27.6
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 3.1e-08 63.2 196 29.6
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 3.1e-08 63.2 260 28.1
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 5.3e-08 62.4 265 27.5
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 7.0e-08 62.0 132 31.1
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 9.1e-08 61.6 235 37.0
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.2e-07 61.2 196 29.1
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.6e-07 60.8 194 28.9
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 2.0e-07 60.5 264 27.7
Oeu032384.1 Olea europaea HOM05D006494 ORTHO05D007787 2.7e-07 60.1 66 51.5
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 3.5e-07 59.7 234 29.1
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 5.9e-07 58.9 239 29.7
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 7.7e-07 58.5 239 29.7
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 2.2e-06 57.0 146 43.2
Hund04846 Selenicereus undatus HOM05D014004 ORTHO05D015823 2.9e-06 56.6 152 39.5
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 3.8e-06 56.2 214 28.5
Sopen06g011990 Solanum pennellii HOM05D006494 ORTHO05D007787 6.5e-06 55.5 126 34.9


User provided reference genes

Program Settings