Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00134 Erythranthe guttata HOM05D003533 ORTHO05D004009 1.2e-32 142.5 71 100.0
Migut.L01388 Erythranthe guttata HOM05D003533 ORTHO05D004009 2.3e-15 85.1 71 64.8
SalBow2G1603 Salvia bowleyana HOM05D003533 ORTHO05D004009 4.4e-14 80.9 69 60.9
SalBow2G3186 Salvia bowleyana HOM05D003533 ORTHO05D004009 4.4e-14 80.9 69 60.9
Nitab4.5_0002059g0090 Nicotiana tabacum HOM05D003533 ORTHO05D004009 6.4e-13 77.0 80 53.8
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 8.3e-13 76.6 80 58.8
unitig_22.g6479 Utricularia gibba HOM05D003533 ORTHO05D004009 5.4e-12 73.9 77 51.9
Peaxi162Scf01141g00003 Petunia axillaris HOM05D003533 ORTHO05D004009 9.2e-12 73.2 80 51.2
Nitab4.5_0002312g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.6e-11 72.4 81 51.9
Nitab4.5_0002059g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.1e-11 72.0 78 50.0
Glyma.04G178500 Glycine max HOM05D003533 ORTHO05D004009 2.7e-11 71.6 72 54.2
Glyma.06G186200 Glycine max HOM05D003533 ORTHO05D004009 4.6e-11 70.9 73 50.7
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 4.6e-11 70.9 73 49.3
Medtr3g078420 Medicago truncatula HOM05D003533 ORTHO05D004009 7.8e-11 70.1 72 50.0
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 2.3e-10 68.6 76 51.3
Psat0s489g0040 Pisum sativum HOM05D003533 ORTHO05D004009 2.3e-10 68.6 71 50.7
vmacro16587 Vaccinium macrocarpon HOM05D003533 ORTHO05D004009 3.0e-10 68.2 75 50.7
CAN.G159.12 Capsicum annuum HOM05D003533 ORTHO05D004009 5.1e-10 67.4 78 47.4
Nitab4.5_0002312g0110 Nicotiana tabacum HOM05D003533 ORTHO05D004009 5.1e-10 67.4 79 49.4
TPR.G31485 Trifolium pratense HOM05D003533 ORTHO05D004009 5.1e-10 67.4 71 49.3
Phvul.009G182200 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 6.6e-10 67.0 71 46.5
Cc11_g14110 Coffea canephora HOM05D003533 ORTHO05D004009 1.1e-09 66.2 81 51.9
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 1.5e-09 65.9 76 48.7
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 1.9e-09 65.5 79 48.1
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 2.5e-09 65.1 77 46.8
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 2.5e-09 65.1 76 46.1
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 2.5e-09 65.1 79 48.1
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 3.3e-09 64.7 75 46.7
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 4.3e-09 64.3 79 49.4
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 4.3e-09 64.3 74 45.9
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 5.6e-09 63.9 74 47.3
Ah.02g112790 Amaranthus hybridus HOM05D003533 ORTHO05D004009 7.3e-09 63.5 84 44.0
Lj1g0014022 Lotus japonicus HOM05D003533 ORTHO05D004009 7.3e-09 63.5 72 45.8
PGSC0003DMG400022647 Solanum tuberosum HOM05D003533 ORTHO05D004009 7.3e-09 63.5 73 43.8
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 9.5e-09 63.2 74 45.9
FAN07G1024 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.2e-08 62.8 74 45.9
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.2e-08 62.8 74 45.9
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 1.2e-08 62.8 78 47.4
HanXRQChr09g0271891 Helianthus annuus HOM05D003533 ORTHO05D004009 1.2e-08 62.8 65 47.7
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 1.6e-08 62.4 70 45.7
Ca_16210_v3 Cicer arietinum L. HOM05D003533 ORTHO05D004009 2.1e-08 62.0 71 45.1
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 2.1e-08 62.0 74 44.6
Sopen05g002310 Solanum pennellii HOM05D003533 ORTHO05D004009 2.1e-08 62.0 71 50.7
Solyc05g006390.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 2.8e-08 61.6 71 50.7
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 3.6e-08 61.2 75 46.7
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 4.7e-08 60.8 81 45.7
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 6.2e-08 60.5 74 44.6
Thecc.02G240400 Theobroma cacao HOM05D003533 ORTHO05D004009 6.2e-08 60.5 76 47.4
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.1e-08 60.1 79 48.1
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.1e-08 60.1 79 48.1
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.1e-08 60.1 79 48.1
BcaB07g31922 Brassica carinata HOM05D003533 ORTHO05D004009 1.1e-07 59.7 83 42.2
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 1.1e-07 59.7 79 44.3
Rhsim12G0161500 Rhododendron simsii HOM05D003533 ORTHO05D004009 1.1e-07 59.7 77 46.8
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 1.1e-07 59.7 73 45.2
Oeu060842.1 Olea europaea HOM05D003533 ORTHO05D004009 1.4e-07 59.3 77 49.4
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 1.8e-07 58.9 80 42.5
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 1.8e-07 58.9 80 42.5
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 1.8e-07 58.9 78 42.3
BcaB03g14468 Brassica carinata HOM05D003533 ORTHO05D004009 2.4e-07 58.5 80 43.8
CSS0048422 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 2.4e-07 58.5 68 51.5
Oeu005690.1 Olea europaea HOM05D003533 ORTHO05D004009 2.4e-07 58.5 72 47.2
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 3.1e-07 58.2 79 46.8
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 3.1e-07 58.2 81 48.1
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 4.0e-07 57.8 77 44.2
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 4.0e-07 57.8 76 46.1
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 4.0e-07 57.8 76 46.1
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 5.2e-07 57.4 76 44.7
A06p15230 Brassica napus HOM05D003533 ORTHO05D004009 6.8e-07 57.0 83 41.0
BraA06t24637Z Brassica rapa HOM05D003533 ORTHO05D004009 6.8e-07 57.0 83 41.0
Cc11_g14120 Coffea canephora HOM05D003533 ORTHO05D004009 6.8e-07 57.0 76 42.1
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 6.8e-07 57.0 76 46.1
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 6.8e-07 57.0 84 41.7
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 6.8e-07 57.0 79 40.5
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 8.9e-07 56.6 76 40.8
Eucgr.K02881 Eucalyptus grandis HOM05D003533 ORTHO05D004009 1.2e-06 56.2 80 42.5
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 1.2e-06 56.2 81 43.2
AL5G27512 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 1.5e-06 55.8 75 44.0
CiPaw.11G032200 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.0e-06 55.5 86 39.5
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 2.0e-06 55.5 72 45.8
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 2.0e-06 55.5 72 45.8
MD16G1084900 Malus domestica HOM05D003533 ORTHO05D004009 2.6e-06 55.1 77 40.3
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 2.6e-06 55.1 76 43.4
Aa31LG4G16780 Aethionema arabicum HOM05D003533 ORTHO05D004009 3.4e-06 54.7 82 37.8
BcaC07g41276 Brassica carinata HOM05D003533 ORTHO05D004009 3.4e-06 54.7 85 41.2
Carub.0005s1428 Capsella rubella HOM05D003533 ORTHO05D004009 3.4e-06 54.7 75 40.0
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 7.6e-06 53.5 78 42.3
A08p30040 Brassica napus HOM05D003533 ORTHO05D004009 9.9e-06 53.1 74 40.5
C08p19120 Brassica napus HOM05D003533 ORTHO05D004009 9.9e-06 53.1 52 51.9
BraA08t34939Z Brassica rapa HOM05D003533 ORTHO05D004009 9.9e-06 53.1 74 40.5


User provided reference genes

Program Settings