Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 3.4e-161 571.6 291 100.0
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 4.4e-100 368.6 285 67.0
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 7.0e-98 361.3 289 65.4
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 4.5e-97 358.6 301 66.8
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 8.5e-96 354.4 283 66.8
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 3.0e-93 345.9 293 63.8
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 1.3e-91 340.5 293 62.5
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 1.3e-91 340.5 284 62.0
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 3.7e-91 339.0 301 59.5
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 3.7e-91 339.0 240 68.8
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 1.4e-90 337.0 284 63.0
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.8e-90 336.7 298 61.4
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 2.4e-90 336.3 221 72.4
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 3.1e-90 335.9 249 68.3
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 3.1e-90 335.9 210 75.7
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 5.3e-90 335.1 217 73.3
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 7.0e-90 334.7 232 71.1
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 7.0e-90 334.7 270 65.2
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 9.1e-90 334.3 304 60.2
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 9.1e-90 334.3 238 68.9
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.2e-89 334.0 262 65.6
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.2e-89 334.0 205 77.6
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 1.6e-89 333.6 303 59.1
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 2.0e-89 333.2 233 69.1
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 2.6e-89 332.8 285 59.3
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 3.5e-89 332.4 239 67.8
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 3.5e-89 332.4 214 73.8
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 3.5e-89 332.4 201 79.1
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 7.7e-89 331.3 216 72.2
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 1.0e-88 330.9 283 62.2
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 1.3e-88 330.5 295 60.3
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 1.3e-88 330.5 298 59.4
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 2.2e-88 329.7 240 68.8
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.9e-88 329.3 216 71.8
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 2.9e-88 329.3 216 71.8
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 2.9e-88 329.3 294 62.9
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 8.5e-88 327.8 284 60.6
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 1.1e-87 327.4 288 59.7
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.1e-87 327.4 290 61.4
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.5e-87 327.0 286 60.5
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.9e-87 326.6 279 61.6
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 1.9e-87 326.6 282 62.8
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 5.5e-87 325.1 257 64.6
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 5.5e-87 325.1 289 60.6
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 9.4e-87 324.3 268 62.7
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.2e-86 323.9 278 62.2
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.2e-86 323.9 243 66.7
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 1.6e-86 323.6 254 64.2
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 2.1e-86 323.2 248 64.9
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 6.1e-86 321.6 293 58.7
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 8.0e-86 321.2 282 60.6
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.4e-85 320.5 278 61.9
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 3.0e-85 319.3 236 66.1
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 3.0e-85 319.3 202 72.3
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 3.0e-85 319.3 244 66.8
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 5.2e-85 318.5 199 73.4
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 6.7e-85 318.2 297 57.6
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 1.2e-84 317.4 276 61.2
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.5e-84 317.0 283 59.4
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 2.0e-84 316.6 243 64.6
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 2.6e-84 316.2 289 59.2
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 2.6e-84 316.2 289 59.2
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 2.6e-84 316.2 243 64.6
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 2.6e-84 316.2 278 60.4
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 7.5e-84 314.7 229 67.7
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 1.3e-83 313.9 276 60.5
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 1.7e-83 313.5 258 61.6
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 8.3e-83 311.2 275 59.6
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 1.1e-82 310.8 293 59.7
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 2.4e-82 309.7 280 57.9
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 9.1e-82 307.8 258 60.1
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 1.2e-81 307.4 269 60.2
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 2.7e-81 306.2 253 62.1
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 1.7e-80 303.5 226 66.4
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 2.9e-80 302.8 283 55.8
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 1.1e-79 300.8 295 56.3
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 2.5e-79 299.7 282 57.8
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 2.7e-78 296.2 274 57.3
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.8e-77 293.5 218 63.8
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 5.7e-76 288.5 213 65.7
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 5.7e-76 288.5 221 66.1
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 2.2e-75 286.6 237 61.2
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 2.4e-74 283.1 225 64.4
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 4.5e-73 278.9 216 63.9
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 1.7e-72 276.9 211 62.6
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 1.5e-71 273.9 312 51.0
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 7.2e-71 271.6 258 56.2
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 6.1e-70 268.5 224 58.0
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 5.2e-69 265.4 228 59.6
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 3.4e-68 262.7 178 67.4
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 8.3e-67 258.1 173 69.4
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 1.6e-65 253.8 272 54.8
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 2.0e-65 253.4 178 68.0
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 5.0e-64 248.8 273 50.5
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 5.0e-56 222.2 220 57.3
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.5e-52 210.7 218 54.6
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 7.5e-52 208.4 222 50.5
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 2.4e-50 203.4 138 70.3
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 7.8e-49 198.4 274 43.4
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 2.1e-41 173.7 197 42.6
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 7.8e-41 171.8 153 58.2
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 3.1e-37 159.8 105 70.5
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 2.9e-35 153.3 222 39.2
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 4.6e-33 146.0 102 64.7
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.3e-32 144.4 179 48.6
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.3e-32 143.7 83 77.1
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 8.7e-32 141.7 109 60.6
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 2.4e-29 133.7 231 35.9
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 1.5e-28 131.0 156 50.6
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 3.2e-26 123.2 117 54.7
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 1.3e-24 117.9 77 71.4
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 9.9e-20 101.7 178 39.9
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 4.2e-18 96.3 70 65.7
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.6e-17 94.4 63 66.7
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 2.1e-17 94.0 68 58.8
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 3.5e-17 93.2 71 67.6
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.5e-15 87.8 58 67.2
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.2e-12 78.2 58 58.6
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.5e-10 70.5 57 61.4
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 5.7e-07 59.3 86 37.2


User provided reference genes

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