Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 0.0e+00 1320.8 661 100.0
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 4.8e-304 1047.3 665 79.4
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 2.6e-302 1041.6 662 79.8
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 4.1e-287 991.1 662 76.4
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 8.0e-259 897.1 662 70.8
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 4.9e-256 887.9 664 69.3
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 9.5e-252 873.6 667 68.1
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 1.7e-248 862.8 663 67.3
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 3.7e-248 861.7 700 65.6
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 6.3e-248 860.9 667 67.2
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 1.8e-247 859.4 668 66.9
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 1.2e-246 856.7 668 66.8
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 4.6e-246 854.7 640 67.7
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 2.3e-245 852.4 640 67.5
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 1.9e-244 849.4 669 66.7
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 2.5e-244 849.0 665 66.5
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 4.3e-244 848.2 672 66.2
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 5.2e-242 841.3 665 66.5
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 2.6e-241 839.0 668 66.0
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 7.5e-241 837.4 663 65.0
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 1.9e-239 832.8 665 65.0
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 1.6e-238 829.7 659 64.6
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 3.5e-238 828.6 664 64.5
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 3.5e-238 828.6 697 63.1
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.0e-237 827.0 678 63.0
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 1.7e-237 826.2 651 64.7
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 2.3e-237 825.9 668 65.9
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 1.9e-236 822.8 668 63.6
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 1.9e-236 822.8 668 63.2
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 3.3e-236 822.0 640 66.6
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 2.1e-235 819.3 678 63.0
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 8.1e-235 817.4 654 65.1
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 1.8e-234 816.2 661 64.0
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 3.1e-234 815.5 649 63.9
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 9.8e-233 810.4 646 64.9
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 1.1e-231 807.0 665 63.6
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 3.2e-231 805.4 664 63.6
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 7.1e-231 804.3 651 63.7
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 2.7e-230 802.4 668 62.4
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 7.8e-230 800.8 668 62.6
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 7.8e-230 800.8 669 61.6
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 1.7e-229 799.7 660 62.9
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 1.1e-228 797.0 674 62.2
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 2.5e-228 795.8 651 62.7
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 4.3e-228 795.0 662 62.4
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 4.3e-228 795.0 670 63.3
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 1.2e-227 793.5 653 62.8
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 1.2e-227 793.5 661 62.6
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 1.6e-227 793.1 661 62.9
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 2.1e-227 792.7 689 61.8
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 3.6e-227 792.0 659 61.9
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 4.7e-227 791.6 660 63.6
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 6.2e-227 791.2 669 61.3
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 8.1e-227 790.8 644 63.5
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 1.1e-226 790.4 641 64.0
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 1.1e-226 790.4 593 67.6
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 1.8e-226 789.6 669 60.1
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 2.3e-226 789.3 666 62.9
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.0e-226 788.5 659 61.8
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 5.2e-226 788.1 664 63.0
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 2.0e-225 786.2 644 64.0
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 2.6e-225 785.8 659 61.5
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 5.8e-225 784.6 669 61.0
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 7.6e-225 784.3 670 61.6
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 2.2e-224 782.7 666 60.1
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 2.9e-224 782.3 669 61.3
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 3.7e-224 781.9 666 61.3
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 2.7e-222 775.8 642 63.2
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 3.5e-222 775.4 614 64.0
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 1.0e-221 773.9 662 60.6
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 1.7e-221 773.1 630 61.6
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 3.0e-221 772.3 637 61.4
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 3.9e-221 771.9 646 61.9
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 1.9e-220 769.6 670 60.4
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 9.6e-220 767.3 623 64.0
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 2.8e-219 765.8 661 61.0
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 2.8e-219 765.8 637 61.1
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 6.2e-219 764.6 632 62.0
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 1.1e-218 763.8 631 62.3
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 1.8e-218 763.1 637 60.9
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 2.4e-218 762.7 667 60.3
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 5.2e-218 761.5 639 60.4
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 6.8e-218 761.1 661 60.8
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 8.9e-218 760.8 662 60.0
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 1.5e-217 760.0 667 60.4
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 2.0e-217 759.6 662 60.4
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 2.0e-217 759.6 640 60.5
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 2.6e-217 759.2 667 59.7
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 1.3e-216 756.9 640 60.3
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 1.7e-216 756.5 665 60.2
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 1.4e-207 726.9 603 62.2
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 3.2e-207 725.7 660 57.7
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 1.1e-204 717.2 585 62.9
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 2.5e-204 716.1 645 57.4
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 2.4e-202 709.5 659 57.2
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 7.9e-198 694.5 587 61.2
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.0e-197 694.1 584 61.1
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 4.8e-195 685.3 656 56.9
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 6.5e-192 674.9 613 58.4
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 7.6e-185 651.4 543 60.2
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 1.6e-182 643.7 561 59.2
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 1.6e-166 590.5 565 54.3
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 1.6e-166 590.5 427 67.7
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 2.6e-161 573.2 687 48.0
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 2.2e-160 570.1 499 59.1
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 4.4e-156 555.8 494 58.1
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.0e-152 544.7 573 51.0
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 7.0e-138 495.4 581 49.6
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 2.6e-132 476.9 661 44.6
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 3.6e-126 456.4 631 42.2
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 2.0e-124 450.7 457 51.4
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 2.3e-117 427.2 844 35.7
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 4.0e-117 426.4 391 61.1
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 9.6e-103 378.6 535 41.3
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 7.6e-100 369.0 395 50.6
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 1.3e-86 325.1 197 77.7
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 3.2e-82 310.5 277 58.8
MCO05G006 Micromonas commoda HOM05D005051 ORTHO05D005945 4.5e-68 263.5 620 31.5
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 1.4e-66 258.5 204 61.3
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 3.9e-64 250.4 324 46.6
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 2.6e-60 237.7 210 56.2
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 5.0e-59 233.4 226 53.5
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 3.3e-55 220.7 395 40.0
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 1.8e-53 214.9 653 29.7
Cfa025345 Carpinus fangiana HOM05D005051 ORTHO05D005945 6.9e-53 213.0 646 28.2
Cre10.g441100 Chlamydomonas reinhardtii HOM05D005051 ORTHO05D005945 2.0e-52 211.5 689 28.7
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 1.3e-46 192.2 146 71.2
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 1.3e-46 192.2 172 61.0
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.0e-43 182.6 227 47.1
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.9e-43 181.0 227 47.1
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 1.0e-40 172.6 120 69.2
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 1.1e-37 162.5 144 53.5
unitig_899.g15018 Utricularia gibba HOM05D003904 ORTHO05D004378 7.7e-36 156.4 110 77.3
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 7.2e-34 149.8 170 51.2
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 9.4e-34 149.4 109 63.3
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 4.0e-32 144.1 304 34.9
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.0e-31 141.7 207 38.2
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 8.3e-30 136.3 125 59.2
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 5.4e-29 133.7 249 36.5
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.6e-28 132.1 249 36.1
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.6e-28 132.1 249 36.1
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 4.5e-28 130.6 249 36.5
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 5.0e-27 127.1 230 37.8
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 1.2e-23 115.9 261 36.0
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 8.3e-22 109.8 157 42.7
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.4e-21 109.0 157 42.7
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.4e-21 109.0 117 50.4
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.8e-21 108.6 157 42.0
Glyma.13G368132 Glycine max HOM05D005051 ORTHO05D005945 2.5e-18 98.2 200 35.5
Glyma.13G258901 Glycine max HOM05D005051 ORTHO05D005945 7.3e-18 96.7 62 80.6
Glyma.13G368066 Glycine max HOM05D005051 ORTHO05D005945 6.1e-17 93.6 62 79.0
Lsat_1_v5_gn_5_150541 Lactuca sativa HOM05D005051 ORTHO05D048368 5.9e-12 77.0 74 55.4
Lsat_1_v5_gn_5_28021 Lactuca sativa HOM05D001978 ORTHO05D048368 2.3e-11 75.1 74 54.1
Hund18406 Selenicereus undatus HOM05D005051 ORTHO05D005945 1.4e-08 65.9 49 63.3
Medtr6g061110 Medicago truncatula HOM05D005051 ORTHO05D000004 8.9e-08 63.2 41 73.2


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