Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02184 Erythranthe guttata HOM05D005177 ORTHO05D006175 2.5e-248 861.7 441 100.0
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 1.3e-164 583.6 409 71.9
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 3.1e-142 509.2 416 63.0
Oeu005908.1 Olea europaea HOM05D005177 ORTHO05D006175 9.1e-142 507.7 401 65.3
Nitab4.5_0002129g0070 Nicotiana tabacum HOM05D005177 ORTHO05D006175 1.2e-138 497.3 403 62.8
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 1.0e-137 494.2 394 62.7
Prupe.6G094900 Prunus persica HOM05D005177 ORTHO05D006175 2.8e-135 486.1 411 60.8
Cc01_g11530 Coffea canephora HOM05D005177 ORTHO05D006175 4.8e-135 485.3 411 60.3
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 1.8e-134 483.4 403 61.8
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 5.9e-133 478.4 393 61.1
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 7.7e-133 478.0 396 60.6
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 2.2e-132 476.5 399 60.4
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 1.9e-131 473.4 407 59.5
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 4.2e-131 472.2 424 58.0
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 5.2e-129 465.3 409 57.7
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 3.4e-128 462.6 414 56.8
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 4.4e-128 462.2 390 58.5
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 5.7e-128 461.8 387 59.7
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 3.7e-127 459.1 376 61.4
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 8.3e-127 458.0 383 59.5
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 1.1e-126 457.6 409 55.3
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 1.2e-125 454.1 399 58.9
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 1.6e-125 453.8 399 58.9
PGR102G1116 Punica granatum HOM05D005177 ORTHO05D006175 5.9e-125 451.8 393 57.3
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 5.9e-125 451.8 399 60.9
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 2.9e-124 449.5 391 56.5
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 3.8e-124 449.1 403 59.6
GSVIVG01025137001 Vitis vinifera HOM05D005177 ORTHO05D006175 3.8e-124 449.1 376 59.6
Thecc.09G260100 Theobroma cacao HOM05D005177 ORTHO05D006175 1.1e-123 447.6 404 57.2
Atru.chr3.3689 Acer truncatum HOM05D005177 ORTHO05D006175 4.2e-123 445.7 410 55.9
CANSAT54G2759 Cannabis sativa HOM05D005177 ORTHO05D006175 9.5e-123 444.5 390 57.4
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 1.2e-122 444.1 405 56.0
CAN.G553.3 Capsicum annuum HOM05D005177 ORTHO05D006175 8.0e-122 441.4 303 68.6
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 8.0e-122 441.4 376 59.6
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 1.4e-121 440.7 400 56.0
Rhsim01G0220100 Rhododendron simsii HOM05D005177 ORTHO05D006175 4.0e-121 439.1 366 59.0
Nitab4.5_0001802g0050 Nicotiana tabacum HOM05D005177 ORTHO05D006175 2.6e-120 436.4 355 63.1
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 3.4e-120 436.0 407 56.8
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 7.5e-120 434.9 428 53.5
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 3.7e-119 432.6 420 53.8
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 7.0e-118 428.3 403 55.1
Phvul.011G072700 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 7.8e-117 424.9 395 53.7
VMungo1127G2232 Vigna mungo HOM05D005177 ORTHO05D006175 3.3e-115 419.5 402 52.2
Aqoxy4G03211 Aquilegia oxysepala HOM05D005177 ORTHO05D006175 1.6e-114 417.2 416 49.0
Glyma.11G153378 Glycine max HOM05D005177 ORTHO05D006175 2.8e-114 416.4 403 53.8
Lj3g0023073 Lotus japonicus HOM05D005177 ORTHO05D006175 1.2e-112 411.0 402 52.7
DCAR_006046 Daucus carota HOM05D005177 ORTHO05D006175 1.5e-112 410.6 371 55.3
MELO3C025749.2 Cucumis melo HOM05D005177 ORTHO05D006175 4.4e-112 409.1 389 54.2
Hund08273 Selenicereus undatus HOM05D005177 ORTHO05D006175 9.8e-112 407.9 421 52.0
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 1.7e-111 407.1 403 52.6
Eucgr.B02471 Eucalyptus grandis HOM05D005177 ORTHO05D006175 2.9e-111 406.4 395 51.4
Ah.01g015010 Amaranthus hybridus HOM05D005177 ORTHO05D006175 1.1e-110 404.4 392 52.6
Psat0s137g0200 Pisum sativum HOM05D005177 ORTHO05D006175 1.9e-110 403.7 402 52.7
Dinv14445 Davidia involucrata HOM05D005177 ORTHO05D006175 5.4e-110 402.1 348 62.9
Sc06g0010530 Simmondsia chinensis HOM05D005177 ORTHO05D006175 7.0e-110 401.7 383 55.4
TPR.G14917 Trifolium pratense HOM05D005177 ORTHO05D006175 7.0e-110 401.7 393 54.7
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 2.0e-109 400.2 397 51.9
FvH4_3g33260 Fragaria vesca HOM05D005177 ORTHO05D006175 1.7e-108 397.1 381 55.1
Lsat_1_v5_gn_2_50980 Lactuca sativa HOM05D005177 ORTHO05D006175 3.0e-108 396.4 402 52.7
Lalb_Chr01g0004161 Lupinus albus HOM05D005177 ORTHO05D006175 3.9e-108 396.0 334 57.8
arahy.Tifrunner.gnm1.ann1.X56S8K Arachis hypogaea HOM05D005177 ORTHO05D006175 1.2e-106 391.0 419 53.0
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 1.2e-106 391.0 432 48.4
Haze_23912 Corylus avellana HOM05D005177 ORTHO05D006175 2.1e-106 390.2 392 52.3
arahy.Tifrunner.gnm1.ann1.Q9R44R Arachis hypogaea HOM05D005177 ORTHO05D006175 3.6e-106 389.4 413 52.8
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 5.2e-105 385.6 405 51.6
CsaV3_6G021650 Cucumis sativus L. HOM05D005177 ORTHO05D006175 1.2e-104 384.4 384 50.5
Medtr4g060790 Medicago truncatula HOM05D005177 ORTHO05D006175 5.8e-104 382.1 394 53.8
CiPaw.13G107500 Carya illinoinensis HOM05D005177 ORTHO05D006175 9.8e-104 381.3 330 61.2
AUR62006522 Chenopodium quinoa HOM05D005177 ORTHO05D006175 3.7e-103 379.4 375 53.3
CiPaw.13G107600 Carya illinoinensis HOM05D005177 ORTHO05D006175 6.4e-103 378.6 266 64.3
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 8.3e-103 378.3 421 46.1
CiPaw.13G107400 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.1e-102 377.9 354 53.7
RcHm_v2.0_Chr5g0060621 Rosa chinensis HOM05D005177 ORTHO05D006175 1.1e-102 377.9 373 54.2
CiPaw.13G107200 Carya illinoinensis HOM05D005177 ORTHO05D006175 7.1e-102 375.2 373 51.5
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 2.7e-101 373.2 429 46.2
EL10Ac9g22467 Beta vulgaris HOM05D005177 ORTHO05D006175 4.6e-101 372.5 400 49.0
Lj3g0021588 Lotus japonicus HOM05D005177 ORTHO05D006175 5.1e-100 369.0 402 49.0
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 8.6e-100 368.2 435 44.4
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 1.5e-99 367.5 425 45.9
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 4.3e-99 365.9 417 46.8
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 5.6e-99 365.5 382 51.0
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 7.3e-99 365.2 438 45.0
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 6.2e-98 362.1 430 43.5
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 1.8e-97 360.5 432 44.4
Dinv01415 Davidia involucrata HOM05D005177 ORTHO05D006175 5.2e-97 359.0 256 67.6
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 5.2e-97 359.0 436 45.2
ECA238G1817 Erigeron canadensis HOM05D000382 ORTHO05D000391 6.8e-97 358.6 362 55.0
Zm00001eb265420 Zea mays HOM05D005177 ORTHO05D006175 6.8e-97 358.6 384 47.7
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 1.2e-96 357.8 436 43.6
Os05g0123300 Oryza sativa ssp. japonica HOM05D005177 ORTHO05D006175 1.5e-96 357.5 392 47.2
ATR1159G017 Amborella trichopoda HOM05D005177 ORTHO05D006175 7.6e-96 355.1 398 46.2
QL01p037225 Quercus lobata HOM05D005177 ORTHO05D006175 6.4e-95 352.1 342 53.5
HanXRQChr14g0433031 Helianthus annuus HOM05D005177 ORTHO05D006175 2.1e-93 347.1 364 50.3
CSS0008980 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D006175 3.9e-92 342.8 264 59.5
SHI06048 Sapria himalayana HOM05D005177 ORTHO05D006175 3.6e-90 336.3 385 47.0
Psat6g221840 Pisum sativum HOM05D005177 ORTHO05D006175 8.9e-89 331.6 425 42.6
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 2.9e-87 326.6 378 48.1
QL01p037240 Quercus lobata HOM05D005177 ORTHO05D006175 3.8e-87 326.2 283 57.2
Gohir.A03G161400 Gossypium hirsutum HOM05D005177 ORTHO05D006175 3.5e-85 319.7 310 56.8
Ca_11098_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 1.7e-84 317.4 418 44.3
Phvul.007G036300 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 1.9e-83 313.9 363 45.7
FAN21G0634 Fragaria x ananassa HOM05D005177 ORTHO05D006175 7.3e-83 312.0 383 47.0
Mapoly0004s0234 Marchantia polymorpha HOM05D005177 ORTHO05D006175 9.6e-83 311.6 325 48.3
VMungo0251G1016 Vigna mungo HOM05D005177 ORTHO05D006175 2.0e-80 303.9 394 42.4
Pp3c24_6040 Physcomitrium patens HOM05D005177 ORTHO05D006175 1.3e-79 301.2 279 52.0
PSO384G3506 Papaver somniferum HOM05D005177 ORTHO05D006175 2.2e-79 300.4 274 53.3
C02p11760 Brassica napus HOM05D005177 ORTHO05D006175 8.4e-79 298.5 278 48.9
CDE04G2914 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 1.4e-78 297.7 283 51.6
PSO339G4079 Papaver somniferum HOM05D005177 ORTHO05D006175 1.4e-78 297.7 281 52.7
SMO143G0224 Selaginella moellendorffii HOM05D005177 ORTHO05D006175 1.4e-78 297.7 373 44.0
TPR.G4931 Trifolium pratense HOM05D005177 ORTHO05D006175 4.6e-77 292.7 406 41.1
Medtr1g062090 Medicago truncatula HOM05D005177 ORTHO05D006175 2.3e-76 290.4 387 41.3
Lj5g0027081 Lotus japonicus HOM05D005177 ORTHO05D006175 3.6e-74 283.1 303 47.2
Lj2C1035T4 Lonicera japonica HOM05D005177 ORTHO05D006175 1.3e-68 264.6 192 63.0
CARHR274040 Cardamine hirsuta HOM05D005177 ORTHO05D006175 3.0e-68 263.5 324 46.9
Ca_19242_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 2.5e-62 243.8 185 59.5
Lalb_Chr06g0165641 Lupinus albus HOM05D005177 ORTHO05D006175 1.6e-61 241.1 364 39.8
CBR_g2921 Chara braunii HOM05D005177 ORTHO05D006175 1.3e-60 238.0 275 42.2
MD11G1130000 Malus domestica HOM05D005177 ORTHO05D006175 6.7e-60 235.7 189 59.8
Lalb_Chr03g0027131 Lupinus albus HOM05D005177 ORTHO05D006175 8.2e-58 228.8 250 52.8
AUR62025012 Chenopodium quinoa HOM05D005177 ORTHO05D006175 7.6e-56 222.2 183 55.2
HPP92_013896 Vanilla planifolia HOM05D005177 ORTHO05D006175 2.8e-50 203.8 243 46.9
CDE07G1541 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 1.0e-44 185.3 234 48.7
Lalb_Chr03g0027121 Lupinus albus HOM05D005177 ORTHO05D006175 2.2e-42 177.6 138 57.2
Glyma.20G125100 Glycine max HOM05D005177 ORTHO05D006175 3.4e-40 170.2 202 46.0
SalBow7G3352 Salvia bowleyana HOM05D005177 ORTHO05D006175 3.0e-36 157.1 137 57.7
Aqoxy230s004 Aquilegia oxysepala HOM05D000156 ORTHO05D002600 4.4e-35 153.3 112 60.7
MD12G1113200 Malus domestica HOM05D005177 ORTHO05D006175 8.2e-34 149.1 95 63.2
MD03G1203800 Malus domestica HOM05D005177 ORTHO05D006175 5.9e-32 142.9 94 62.8
Lj2A1035T47 Lonicera japonica HOM05D005177 ORTHO05D006175 1.3e-31 141.7 178 50.6
SalBow2G1018 Salvia bowleyana HOM05D005177 ORTHO05D006175 3.8e-31 140.2 108 63.0
MD02G1279000 Malus domestica HOM05D005177 ORTHO05D006175 5.0e-31 139.8 94 61.7
SalBow8G4533 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.9e-30 137.9 83 77.1
AUR62033196 Chenopodium quinoa HOM05D005177 ORTHO05D006175 1.8e-25 121.3 101 53.5
AUR62037383 Chenopodium quinoa HOM05D005177 ORTHO05D006175 1.7e-23 114.8 101 48.5
CDE07G0204 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 6.5e-23 112.8 89 64.0
SEGI_18444 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 1.5e-22 111.7 77 63.6
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.0e-20 105.5 109 56.9
SEGI_09926 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 1.2e-16 92.0 85 43.5
CSS0013492 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D033885 4.4e-11 73.6 136 44.1
CSS0040502 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D033885 4.4e-11 73.6 145 46.2
MD02G1245500 Malus domestica HOM05D005177 ORTHO05D006175 2.7e-08 64.3 41 73.2
Phvul.011G073000 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 5.6e-06 56.6 43 58.1


User provided reference genes

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