Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 4.6e-106 387.9 191 100.0
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 1.3e-81 306.6 188 79.3
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 1.2e-79 300.1 186 80.1
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 2.1e-79 299.3 188 78.7
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 3.1e-78 295.4 186 78.5
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 1.9e-75 286.2 191 73.3
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 1.6e-74 283.1 188 71.3
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 2.1e-74 282.7 191 74.3
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 4.6e-74 281.6 191 73.8
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 6.0e-74 281.2 191 72.8
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 1.7e-73 279.6 195 71.8
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 1.7e-73 279.6 194 70.6
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 3.0e-73 278.9 197 70.6
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 3.0e-73 278.9 189 73.5
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 3.9e-73 278.5 189 69.3
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 3.9e-73 278.5 193 72.0
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 6.6e-73 277.7 189 69.3
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 8.7e-73 277.3 193 71.5
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 1.1e-72 276.9 181 75.7
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 1.9e-72 276.2 191 72.3
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 1.9e-72 276.2 188 71.3
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 7.3e-72 274.2 187 72.7
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 1.3e-71 273.5 192 69.3
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 2.1e-71 272.7 191 69.6
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 2.1e-71 272.7 189 70.4
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 3.6e-71 271.9 197 69.0
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 4.8e-71 271.6 197 69.5
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 4.8e-71 271.6 190 70.5
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 4.8e-71 271.6 192 69.3
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 6.2e-71 271.2 189 70.9
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 6.2e-71 271.2 190 70.5
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 1.4e-70 270.0 190 71.6
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 1.4e-70 270.0 198 68.7
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 1.4e-70 270.0 197 69.0
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 9.0e-70 267.3 188 69.7
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 9.0e-70 267.3 198 68.2
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 5.8e-69 264.6 189 70.9
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 9.9e-69 263.8 190 67.9
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 1.3e-68 263.5 198 66.2
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 1.3e-68 263.5 198 66.2
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 1.7e-68 263.1 189 67.7
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 4.9e-68 261.5 192 66.7
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 1.4e-67 260.0 194 68.0
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 1.4e-67 260.0 194 68.0
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 1.9e-67 259.6 192 65.6
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 1.9e-67 259.6 192 65.6
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 1.9e-67 259.6 186 68.3
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 2.4e-67 259.2 224 61.6
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 3.2e-67 258.8 191 67.0
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 3.2e-67 258.8 191 67.0
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 3.2e-67 258.8 190 67.4
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 5.4e-67 258.1 192 65.1
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 7.1e-67 257.7 192 65.1
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 7.1e-67 257.7 194 64.9
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 9.3e-67 257.3 187 68.4
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 1.6e-66 256.5 188 68.1
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 2.7e-66 255.8 186 68.3
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 2.7e-66 255.8 192 64.6
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 3.5e-66 255.4 186 69.4
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 3.5e-66 255.4 191 68.6
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 3.5e-66 255.4 195 68.7
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 4.6e-66 255.0 193 68.9
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 7.9e-66 254.2 194 66.5
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 1.0e-65 253.8 192 64.1
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 1.0e-65 253.8 192 67.7
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 1.0e-65 253.8 190 66.3
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 1.0e-65 253.8 194 64.4
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 3.0e-65 252.3 192 64.1
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 5.1e-65 251.5 195 63.6
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 5.1e-65 251.5 186 68.3
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 5.1e-65 251.5 186 68.3
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 1.1e-64 250.4 194 63.9
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 1.9e-64 249.6 192 63.0
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 2.5e-64 249.2 192 66.7
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 3.3e-64 248.8 192 63.5
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 7.4e-64 247.7 193 65.3
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 7.4e-64 247.7 229 59.0
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 9.6e-64 247.3 182 67.6
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 1.8e-62 243.0 191 64.9
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 9.0e-62 240.7 192 63.0
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 9.9e-61 237.3 191 60.2
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 1.3e-60 236.9 194 61.9
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 1.7e-60 236.5 187 62.0
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 2.9e-60 235.7 191 62.3
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 7.1e-59 231.1 189 60.3
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 9.3e-59 230.7 204 59.3
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 4.6e-58 228.4 187 62.0
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 6.0e-58 228.0 187 62.6
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 1.0e-57 227.3 191 61.3
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 3.0e-57 225.7 191 63.4
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 5.1e-57 224.9 191 61.3
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 8.1e-55 217.6 277 45.8
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 9.0e-54 214.2 151 69.5
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 2.0e-53 213.0 179 60.3
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 4.5e-53 211.8 187 61.0
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 1.0e-52 210.7 187 60.4
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 3.8e-52 208.8 180 60.6
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 3.8e-52 208.8 191 57.6
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 6.5e-52 208.0 188 59.0
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 1.6e-50 203.4 185 56.2
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 2.1e-50 203.0 184 56.5
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 1.3e-49 200.3 185 56.2
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 1.8e-49 199.9 186 58.1
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 2.3e-49 199.5 184 56.5
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 8.7e-49 197.6 186 55.4
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 1.1e-43 180.6 148 59.5
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 1.6e-34 150.2 181 48.6
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 3.6e-34 149.1 188 43.6
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 5.1e-33 145.2 113 64.6
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 2.0e-32 143.3 111 69.4
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 1.8e-25 120.2 113 56.6
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 6.3e-23 111.7 179 37.4
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 5.0e-20 102.1 115 50.4
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 4.4e-16 89.0 50 80.0
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 1.7e-15 87.0 54 70.4
Cre17.g726650 Chlamydomonas reinhardtii HOM05D006871 ORTHO05D008544 3.1e-14 82.8 186 33.3
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 2.5e-11 73.2 67 50.7
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 1.2e-08 64.3 194 27.8
MD03G1286500 Malus domestica HOM05D006871 ORTHO05D008544 1.5e-08 63.9 35 80.0
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 2.6e-08 63.2 58 60.3


User provided reference genes

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