Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.1e-64 248.8 123 100.0
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.6e-51 206.1 115 86.1
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 6.0e-51 204.1 115 87.0
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 4.5e-30 134.8 106 60.4
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 2.3e-26 122.5 99 60.6
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 6.9e-23 110.9 113 53.1
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 3.8e-21 105.1 117 49.6
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 1.9e-20 102.8 107 53.3
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 9.3e-20 100.5 100 53.0
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 2.1e-19 99.4 78 64.1
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 2.1e-19 99.4 109 49.5
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 2.1e-19 99.4 109 49.5
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 3.6e-19 98.6 80 60.0
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 3.6e-19 98.6 111 47.7
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 6.1e-19 97.8 114 49.1
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.0e-18 97.1 106 50.0
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 6.7e-18 94.4 105 48.6
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 1.1e-17 93.6 112 48.2
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 1.5e-17 93.2 117 47.0
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 2.5e-17 92.4 113 48.7
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 7.4e-17 90.9 115 40.9
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 7.4e-17 90.9 119 42.9
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.7e-16 89.7 88 51.1
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 6.3e-16 87.8 106 47.2
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 6.3e-16 87.8 87 48.3
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 8.2e-16 87.4 86 48.8
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 1.1e-15 87.0 110 40.9
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 4.1e-15 85.1 71 53.5
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 4.1e-15 85.1 88 51.1
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 2.0e-14 82.8 105 43.8
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 2.6e-14 82.4 104 43.3
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 2.6e-14 82.4 106 43.4
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 4.5e-14 81.6 106 43.4
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 5.9e-14 81.3 103 45.6
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 1.0e-13 80.5 137 37.2
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 1.3e-13 80.1 103 45.6
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 1.3e-13 80.1 65 55.4
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 1.7e-13 79.7 102 44.1
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 3.8e-13 78.6 104 41.3
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 6.5e-13 77.8 83 53.0
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 6.5e-13 77.8 112 41.1
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 8.5e-13 77.4 119 40.3
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 3.2e-12 75.5 57 56.1
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 4.2e-12 75.1 110 35.5
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 5.5e-12 74.7 54 59.3
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 5.5e-12 74.7 77 46.8
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 7.2e-12 74.3 113 39.8
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 7.2e-12 74.3 54 59.3
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.2e-11 73.6 81 42.0
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 2.1e-11 72.8 121 40.5
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 2.1e-11 72.8 83 43.4
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 2.7e-11 72.4 70 52.9
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 2.7e-11 72.4 85 40.0
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 4.7e-11 71.6 77 44.2
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 6.1e-11 71.2 102 43.1
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 1.0e-10 70.5 65 52.3
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.0e-10 70.5 65 52.3
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 3.0e-10 68.9 69 46.4
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 3.9e-10 68.6 88 39.8
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 8.8e-10 67.4 56 55.4
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.1e-09 67.0 65 50.8
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 2.6e-09 65.9 70 45.7
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 3.3e-09 65.5 69 44.9
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 7.4e-09 64.3 69 43.5
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 7.4e-09 64.3 99 38.4
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 9.7e-09 63.9 69 43.5
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 1.3e-08 63.5 64 43.8
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.3e-08 63.5 100 39.0
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 6.3e-08 61.2 52 53.8
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 6.3e-08 61.2 60 46.7
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 6.3e-08 61.2 46 63.0
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 8.2e-08 60.8 60 48.3
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 1.1e-07 60.5 69 40.6
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 1.1e-07 60.5 69 40.6
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 1.4e-07 60.1 83 37.3
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 4.1e-07 58.5 69 40.6
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 5.3e-07 58.2 53 43.4
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 5.9e-06 54.7 56 44.6


User provided reference genes

Program Settings