Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.9e-253 878.6 438 100.0
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 4.9e-212 741.1 438 83.3
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.4e-203 713.0 438 80.4
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.9e-203 712.6 438 80.4
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 2.4e-195 685.6 463 74.1
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.6e-183 645.2 437 72.5
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.2e-181 640.2 437 72.5
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.4e-181 638.6 460 70.0
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.3e-180 636.7 437 72.1
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.7e-180 636.3 437 71.9
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 3.2e-179 632.1 431 73.8
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.2e-179 632.1 437 71.6
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 2.7e-178 629.0 423 73.5
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 8.1e-175 617.5 421 72.0
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 4.0e-174 615.1 422 71.6
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.6e-173 612.5 422 72.0
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 5.8e-173 611.3 420 71.7
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 9.9e-173 610.5 427 70.7
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 2.2e-172 609.4 438 68.5
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 3.8e-172 608.6 420 72.1
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.4e-171 606.7 429 69.2
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.9e-171 606.3 425 70.8
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 2.4e-171 605.9 444 69.6
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 9.3e-171 604.0 425 70.8
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.6e-170 603.2 427 69.6
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 7.8e-170 600.9 429 69.0
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.0e-169 600.5 438 68.5
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 2.3e-169 599.4 432 68.1
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 6.6e-169 597.8 429 69.7
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.1e-168 597.0 420 70.5
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.1e-168 597.0 428 67.1
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.9e-168 596.3 429 69.5
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 4.3e-168 595.1 437 67.0
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 9.6e-168 594.0 437 68.2
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 1.3e-167 593.6 422 69.0
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.3e-167 593.6 422 68.5
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.3e-167 593.6 430 68.1
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 2.1e-167 592.8 423 69.5
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 4.8e-167 591.7 431 67.7
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 4.8e-167 591.7 425 68.0
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 6.2e-167 591.3 424 68.2
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.4e-166 590.1 431 68.0
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 1.8e-166 589.7 422 68.0
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 2.4e-166 589.3 429 68.3
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 9.0e-166 587.4 457 65.0
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.5e-165 586.6 422 67.1
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 2.6e-165 585.9 420 68.1
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 3.4e-165 585.5 431 67.7
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 3.4e-165 585.5 431 67.7
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 2.9e-164 582.4 427 67.9
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 8.4e-164 580.9 423 68.1
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.1e-163 580.5 422 67.1
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 4.2e-163 578.6 425 66.4
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 4.2e-163 578.6 422 66.8
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 5.4e-163 578.2 428 65.2
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.4e-163 578.2 425 66.8
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 7.1e-163 577.8 417 68.6
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 7.1e-163 577.8 427 67.7
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 7.1e-163 577.8 431 67.3
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 7.1e-163 577.8 426 66.4
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.2e-162 577.0 431 66.4
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 1.2e-162 577.0 431 67.3
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.2e-162 577.0 422 67.8
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.6e-162 576.6 420 66.9
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.6e-162 576.6 420 66.9
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 2.7e-162 575.9 422 66.4
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 3.5e-162 575.5 436 66.7
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.0e-161 573.9 435 66.0
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.0e-161 573.9 422 66.8
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.8e-161 573.2 436 66.7
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 2.3e-161 572.8 427 67.4
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 3.9e-161 572.0 440 65.7
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 8.7e-161 570.9 440 65.7
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 1.5e-160 570.1 436 66.3
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.9e-160 569.7 436 66.3
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.3e-159 567.0 425 66.6
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.6e-159 566.6 429 64.6
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 2.1e-159 566.2 553 57.1
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 6.2e-159 564.7 437 63.8
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.4e-158 563.5 429 64.6
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.8e-158 563.1 429 64.6
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.2e-157 560.5 422 64.7
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.6e-157 559.3 422 64.7
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 4.5e-157 558.5 423 66.0
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 2.2e-156 556.2 424 65.6
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 4.9e-156 555.1 487 59.1
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 8.4e-156 554.3 424 65.1
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 2.5e-155 552.7 425 64.0
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.5e-155 552.7 424 65.3
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 3.2e-155 552.4 424 64.2
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 7.1e-155 551.2 425 63.8
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 4.6e-154 548.5 432 63.2
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 4.6e-154 548.5 425 64.5
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.3e-152 542.3 425 63.8
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.3e-152 542.0 425 63.8
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 7.4e-152 541.2 425 63.8
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 5.3e-150 535.0 424 63.7
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 2.6e-149 532.7 356 72.8
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 2.9e-148 529.3 417 63.5
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 2.9e-148 529.3 439 64.5
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 8.4e-148 527.7 436 58.9
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 1.1e-144 517.3 420 61.2
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 4.8e-143 511.9 429 57.8
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 9.4e-139 497.7 429 56.4
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.9e-134 481.5 423 54.6
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 1.2e-133 480.7 425 58.6
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 5.0e-132 475.3 422 54.3
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 7.4e-128 461.5 338 68.6
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.2e-125 454.1 427 52.7
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.6e-117 427.2 353 62.3
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 1.2e-114 417.5 303 68.6
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 2.1e-114 416.8 427 48.2
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 5.2e-113 412.1 424 53.5
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 3.7e-111 406.0 268 73.9
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 3.4e-104 382.9 242 75.6
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 4.4e-104 382.5 434 47.9
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 2.0e-85 320.5 425 44.0
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 2.1e-82 310.5 195 75.9
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.2e-79 300.4 184 79.9
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 3.3e-75 286.6 254 57.1
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 4.9e-63 246.1 293 48.5
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.1e-43 181.8 138 63.8
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.8e-33 147.9 105 71.4
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 6.1e-29 132.9 99 64.6
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 7.9e-29 132.5 88 71.6
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 5.7e-27 126.3 94 59.6
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 9.7e-11 72.4 354 22.9
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 9.1e-09 65.9 88 44.3
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 2.6e-08 64.3 42 66.7


User provided reference genes

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