Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01779 Erythranthe guttata HOM05D004297 ORTHO05D005213 0.0e+00 2263.4 1127 100.0
MSTRG.17286 Avicennia marina HOM05D004297 ORTHO05D005213 0.0e+00 2018.8 1119 89.5
SGA_v2.0_scaffold78G25411 Striga asiatica HOM05D004297 ORTHO05D005213 0.0e+00 1984.5 1127 87.3
SalBow3G3037 Salvia bowleyana HOM05D004297 ORTHO05D005213 0.0e+00 1979.9 1124 86.5
Dinv43843 Davidia involucrata HOM05D004297 ORTHO05D005213 0.0e+00 1887.1 1126 82.7
Oeu036598.1 Olea europaea HOM05D004297 ORTHO05D005213 0.0e+00 1881.7 1154 81.1
Cc02_g38370 Coffea canephora HOM05D004297 ORTHO05D005213 0.0e+00 1875.9 1123 82.8
CAN.G78.102 Capsicum annuum HOM05D004297 ORTHO05D005213 0.0e+00 1854.7 1133 81.6
GSVIVG01026995001 Vitis vinifera HOM05D004297 ORTHO05D005213 0.0e+00 1854.7 1127 81.2
Manes.01G254400 Manihot esculenta HOM05D004297 ORTHO05D005213 0.0e+00 1852.8 1127 81.2
Sopen01g038660 Solanum pennellii HOM05D004297 ORTHO05D005213 0.0e+00 1850.5 1134 81.1
Actinidia10047 Actinidia chinensis HOM05D004297 ORTHO05D005213 0.0e+00 1849.7 1131 81.0
Gorai.001G159200 Gossypium raimondii HOM05D004297 ORTHO05D005213 0.0e+00 1843.2 1127 80.0
Prupe.2G174200 Prunus persica HOM05D004297 ORTHO05D005213 0.0e+00 1843.2 1127 80.3
Solyc01g094880.3 Solanum lycopersicum HOM05D004297 ORTHO05D005213 0.0e+00 1841.6 1133 80.8
Actinidia20884 Actinidia chinensis HOM05D004297 ORTHO05D005213 0.0e+00 1839.3 1129 81.0
Thecc.01G355600 Theobroma cacao HOM05D004297 ORTHO05D005213 0.0e+00 1838.2 1127 80.4
Atru.chr5.535 Acer truncatum HOM05D004297 ORTHO05D005213 0.0e+00 1835.5 1127 80.3
Gohir.A07G141200 Gossypium hirsutum HOM05D004297 ORTHO05D005213 0.0e+00 1834.7 1127 79.9
CANSAT56G3337 Cannabis sativa HOM05D004297 ORTHO05D005213 0.0e+00 1830.1 1126 79.7
QL04p054287 Quercus lobata HOM05D004297 ORTHO05D005213 0.0e+00 1825.8 1135 79.3
Cfa003893 Carpinus fangiana HOM05D004297 ORTHO05D005213 0.0e+00 1822.8 1128 80.2
CSS0008006 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 0.0e+00 1822.4 1129 80.4
Ciclev10018597m.g Citrus clementina HOM05D004297 ORTHO05D005213 0.0e+00 1821.6 1126 80.0
CiPaw.02G033500 Carya illinoinensis HOM05D004297 ORTHO05D005213 0.0e+00 1820.4 1129 79.7
Cpa.g.sc11.37 Carica papaya HOM05D004297 ORTHO05D005213 0.0e+00 1817.4 1100 81.5
Duzib133G0964 Durio zibethinus HOM05D004297 ORTHO05D005213 0.0e+00 1817.0 1127 79.1
Potri.014G087900 Populus trichocarpa HOM05D004297 ORTHO05D005213 0.0e+00 1815.4 1130 80.1
PGR042G3632 Punica granatum HOM05D004297 ORTHO05D005213 0.0e+00 1814.3 1130 79.6
RcHm_v2.0_Chr7g0221211 Rosa chinensis HOM05D004297 ORTHO05D005213 0.0e+00 1811.6 1132 78.7
Lj1g0026001 Lotus japonicus HOM05D004297 ORTHO05D005213 0.0e+00 1810.8 1128 79.6
Lj9C586G6 Lonicera japonica HOM05D004297 ORTHO05D005213 0.0e+00 1806.2 1129 79.7
Medtr7g078170 Medicago truncatula HOM05D004297 ORTHO05D005213 0.0e+00 1803.9 1128 78.9
Nitab4.5_0006942g0020 Nicotiana tabacum HOM05D004297 ORTHO05D005213 0.0e+00 1803.5 1167 78.2
TAR629G2795 Trochodendron aralioides HOM05D004297 ORTHO05D005213 0.0e+00 1803.5 1129 79.1
Gohir.D07G146700 Gossypium hirsutum HOM05D004297 ORTHO05D005213 0.0e+00 1801.9 1127 78.7
TWI59G0377 Tripterygium wilfordii HOM05D004297 ORTHO05D005213 0.0e+00 1798.1 1128 79.7
Eucgr.E00109 Eucalyptus grandis HOM05D004297 ORTHO05D005213 0.0e+00 1794.6 1128 78.6
FvH4_5g28900 Fragaria vesca HOM05D004297 ORTHO05D005213 0.0e+00 1794.2 1131 78.2
Potri.002G162000 Populus trichocarpa HOM05D004297 ORTHO05D005213 0.0e+00 1793.9 1129 79.3
Nitab4.5_0000583g0330 Nicotiana tabacum HOM05D004297 ORTHO05D005213 0.0e+00 1793.5 1202 76.1
Glyma.09G256700 Glycine max HOM05D004297 ORTHO05D005213 0.0e+00 1790.0 1125 79.6
Lalb_Chr03g0038271 Lupinus albus HOM05D004297 ORTHO05D005213 0.0e+00 1787.3 1128 78.4
PSO063G5582 Papaver somniferum HOM05D004297 ORTHO05D005213 0.0e+00 1786.5 1126 78.3
FAN18G0188 Fragaria x ananassa HOM05D004297 ORTHO05D005213 0.0e+00 1785.8 1142 77.5
VMungo1383G1290 Vigna mungo HOM05D004297 ORTHO05D005213 0.0e+00 1783.8 1129 78.3
TPR.G37786 Trifolium pratense HOM05D004297 ORTHO05D005213 0.0e+00 1782.3 1130 78.4
arahy.Tifrunner.gnm1.ann1.553FBT Arachis hypogaea HOM05D004297 ORTHO05D005213 0.0e+00 1778.1 1128 79.0
FAN13G2415 Fragaria x ananassa HOM05D004297 ORTHO05D005213 0.0e+00 1777.7 1142 77.4
arahy.Tifrunner.gnm1.ann1.0F1BT2 Arachis hypogaea HOM05D004297 ORTHO05D005213 0.0e+00 1775.8 1126 79.0
Glyma.18G235800 Glycine max HOM05D004297 ORTHO05D005213 0.0e+00 1774.2 1125 78.7
Sabra14G0063700 Salix brachista HOM05D004297 ORTHO05D005213 0.0e+00 1774.2 1190 75.9
TAR636G0349 Trochodendron aralioides HOM05D004297 ORTHO05D005213 0.0e+00 1767.7 1080 81.2
Peaxi162Scf00020g01027 Petunia axillaris HOM05D004297 ORTHO05D005213 0.0e+00 1761.9 1083 81.3
Nn6g33322 Nelumbo nucifera HOM05D004297 ORTHO05D005213 0.0e+00 1759.2 1127 76.1
Hund27256 Selenicereus undatus HOM05D004297 ORTHO05D005213 0.0e+00 1756.5 1127 77.1
Aqoxy5G04078 Aquilegia oxysepala HOM05D004297 ORTHO05D005213 0.0e+00 1748.4 1126 77.3
HanXRQChr04g0121341 Helianthus annuus HOM05D004297 ORTHO05D005213 0.0e+00 1747.3 1128 76.7
MELO3C021189.2 Cucumis melo HOM05D004297 ORTHO05D005213 0.0e+00 1743.0 1125 77.6
CsaV3_6G000810 Cucumis sativus L. HOM05D004297 ORTHO05D005213 0.0e+00 1743.0 1133 77.4
ECA236G0245 Erigeron canadensis HOM05D004297 ORTHO05D005213 0.0e+00 1743.0 1127 76.4
DCAR_006941 Daucus carota HOM05D004297 ORTHO05D005213 0.0e+00 1741.1 1129 75.6
Lsat_1_v5_gn_7_3220 Lactuca sativa HOM05D004297 ORTHO05D005213 0.0e+00 1738.0 1130 76.7
Sed0013986 Sechium edule HOM05D004297 ORTHO05D005213 0.0e+00 1737.2 1123 76.9
unitig_749.g14347 Utricularia gibba HOM05D004297 ORTHO05D005213 0.0e+00 1737.2 1144 76.0
Duzib138G1153 Durio zibethinus HOM05D004297 ORTHO05D005213 0.0e+00 1733.4 1127 76.6
ClCG06G003500 Citrullus lanatus HOM05D004297 ORTHO05D005213 0.0e+00 1707.2 1193 73.3
Rhsim07G0012700 Rhododendron simsii HOM05D004297 ORTHO05D005213 0.0e+00 1707.2 1319 68.2
EL10Ac1g00379 Beta vulgaris HOM05D004297 ORTHO05D005213 0.0e+00 1698.3 1127 74.5
Phvul.008G060200 Phaseolus vulgaris HOM05D004297 ORTHO05D005213 0.0e+00 1696.4 1079 78.3
THA.LOC104817308 Tarenaya hassleriana HOM05D004297 ORTHO05D005213 0.0e+00 1692.2 1123 74.9
Dinv32504 Davidia involucrata HOM05D004297 ORTHO05D005213 0.0e+00 1682.5 1155 74.5
Thhalv10005756m.g Eutrema salsugineum HOM05D004297 ORTHO05D005213 0.0e+00 1677.1 1128 74.4
AL5G43840 Arabidopsis lyrata HOM05D004297 ORTHO05D005213 0.0e+00 1673.7 1128 74.5
MD11G1239500 Malus domestica HOM05D004297 ORTHO05D005213 0.0e+00 1672.9 1040 79.4
Sabra02G0129100 Salix brachista HOM05D004297 ORTHO05D005213 0.0e+00 1666.0 1253 69.6
AT3G61480 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 0.0e+00 1661.4 1128 74.2
AT5G28350 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 0.0e+00 1661.4 1128 74.2
Carub.0005s2817 Capsella rubella HOM05D004297 ORTHO05D005213 0.0e+00 1642.5 1129 73.2
BolC8t51219H Brassica oleracea HOM05D004297 ORTHO05D005213 0.0e+00 1641.7 1125 73.2
C08p36360 Brassica napus HOM05D004297 ORTHO05D005213 0.0e+00 1641.3 1124 73.3
Haze_15540 Corylus avellana HOM05D004297 ORTHO05D005213 0.0e+00 1639.0 1130 74.0
ATR0661G292 Amborella trichopoda HOM05D004297 ORTHO05D005213 0.0e+00 1631.3 1129 71.9
vmacro13256 Vaccinium macrocarpon HOM05D004297 ORTHO05D005213 0.0e+00 1623.6 1165 72.3
A09p53530 Brassica napus HOM05D004297 ORTHO05D005213 0.0e+00 1622.1 1124 72.6
BraA09t40777Z Brassica rapa HOM05D004297 ORTHO05D005213 0.0e+00 1620.9 1124 72.5
Aa31LG1G27480 Aethionema arabicum HOM05D004297 ORTHO05D005213 0.0e+00 1560.0 1156 68.8
Os02g0786000 Oryza sativa ssp. japonica HOM05D004297 ORTHO05D005213 0.0e+00 1553.9 1132 68.5
Ca_00827_v3 Cicer arietinum L. HOM05D000005 ORTHO05D005213 0.0e+00 1544.6 954 80.2
Zm00001eb257250 Zea mays HOM05D004297 ORTHO05D005213 0.0e+00 1538.5 1125 67.7
AUR62022597 Chenopodium quinoa HOM05D004297 ORTHO05D005213 0.0e+00 1538.1 1164 68.0
Zm00001eb192800 Zea mays HOM05D004297 ORTHO05D005213 0.0e+00 1534.6 1125 68.1
BcaC07g40648 Brassica carinata HOM05D004297 ORTHO05D005213 0.0e+00 1521.5 1121 69.4
AL5G43780 Arabidopsis lyrata HOM05D004297 ORTHO05D005213 0.0e+00 1463.0 1110 68.8
Hma1.2p1_0071F.1_g037770 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 0.0e+00 1450.6 841 84.7
Sc23g0002720 Simmondsia chinensis HOM05D004297 ORTHO05D005213 0.0e+00 1446.4 873 80.8
Hma1.2p1_0071F.1_g037780 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 0.0e+00 1444.9 837 84.7
Psat3g107280 Pisum sativum HOM05D004297 ORTHO05D005213 0.0e+00 1412.5 982 73.7
CARHR171820 Cardamine hirsuta HOM05D004297 ORTHO05D005213 0.0e+00 1372.1 864 78.1
Sed0025112 Sechium edule HOM05D004297 ORTHO05D005213 0.0e+00 1234.6 1132 58.9
Sp5g01920 Schrenkiella parvula HOM05D004297 ORTHO05D005213 0.0e+00 1232.2 829 73.1
FAN08G3284 Fragaria x ananassa HOM05D004297 ORTHO05D005213 0.0e+00 1205.3 786 75.1
CiPaw.01G064500 Carya illinoinensis HOM05D004297 ORTHO05D005213 0.0e+00 1174.8 686 84.4
Mapoly0027s0035 Marchantia polymorpha HOM05D004297 ORTHO05D005213 0.0e+00 1139.8 1149 51.8
SMO367G0176 Selaginella moellendorffii HOM05D004297 ORTHO05D005213 6.7e-306 1054.3 1127 49.6
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 6.9e-303 1044.3 1527 41.8
Pp3c2_4880 Physcomitrium patens HOM05D004297 ORTHO05D005213 1.2e-299 1033.5 1150 48.3
Pp3c14_21590 Physcomitrium patens HOM05D004297 ORTHO05D005213 1.1e-279 967.2 1155 45.7
CBR_g36279 Chara braunii HOM05D004297 ORTHO05D005213 2.7e-267 926.0 1385 38.6
CDE04G2307 Ceratophyllum demersum HOM05D004297 ORTHO05D005213 3.3e-265 919.1 671 66.8
COL.COLO4_12744 Corchorus olitorius HOM05D004297 ORTHO05D005213 3.8e-261 905.6 530 85.5
CSS0030491 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 5.2e-258 895.2 585 78.3
MD01G1067900 Malus domestica HOM05D004297 ORTHO05D005213 7.2e-252 874.8 678 66.2
AUR62004390 Chenopodium quinoa HOM05D004297 ORTHO05D005213 2.8e-248 862.8 742 59.4
Oeu039184.1 Olea europaea HOM05D004297 ORTHO05D005213 2.7e-222 776.5 454 83.3
Psat0ss4650g0200 Pisum sativum HOM05D004297 ORTHO05D005213 1.7e-208 730.7 551 68.1
CDE04G3641 Ceratophyllum demersum HOM05D004297 ORTHO05D005213 2.7e-198 696.8 434 80.4
SEGI_29424 Sequoiadendron giganteum HOM05D004297 ORTHO05D000001 1.9e-188 664.1 420 74.3
HPP92_012694 Vanilla planifolia HOM05D004297 ORTHO05D005213 1.3e-181 641.3 593 54.0
COL.COLO4_12743 Corchorus olitorius HOM05D004297 ORTHO05D005213 3.0e-141 507.3 454 58.4
Psat7g148560 Pisum sativum HOM05D004297 ORTHO05D005213 2.8e-139 500.7 311 79.1
AUR62004391 Chenopodium quinoa HOM05D004297 ORTHO05D005213 1.0e-136 492.3 377 71.4
Peaxi162Scf41243g00005 Petunia axillaris HOM05D004297 ORTHO05D005213 8.3e-123 446.0 333 73.0
MCO14G315 Micromonas commoda HOM05D004297 ORTHO05D005213 6.2e-110 403.3 1215 28.5
Cre12.g506650 Chlamydomonas reinhardtii HOM05D004297 ORTHO05D005213 1.0e-88 332.8 1454 23.2
PRCOL_00000293 Prasinoderma coloniale HOM05D004297 ORTHO05D005213 7.3e-87 326.6 770 30.8
AagrBONN_evm.TU.Sc2ySwM_344.3195 Anthoceros agrestis HOM05D004297 ORTHO05D005213 2.1e-81 308.5 311 53.4
HPP92_012695 Vanilla planifolia HOM05D004297 ORTHO05D005213 3.7e-78 297.7 189 76.7
HPP92_012670 Vanilla planifolia HOM05D004297 ORTHO05D005213 3.2e-74 284.6 233 66.1
Sc23g0002730 Simmondsia chinensis HOM05D004297 ORTHO05D005213 1.4e-69 269.2 167 76.0
MD01G1068000 Malus domestica HOM05D004297 ORTHO05D005213 3.8e-67 261.2 199 74.9
BcaC07g42689 Brassica carinata HOM05D004297 ORTHO05D005213 3.1e-61 241.5 168 68.5
Ah.05g180350 Amaranthus hybridus HOM05D004297 ORTHO05D005213 7.7e-60 236.9 206 57.8
AagrBONN_evm.TU.Sc2ySwM_344.3204 Anthoceros agrestis HOM05D004297 ORTHO05D005213 4.2e-58 231.1 327 38.8
vmacro23481 Vaccinium macrocarpon HOM05D004297 ORTHO05D005213 7.2e-58 230.3 297 47.8
TAR629G3312 Trochodendron aralioides HOM05D004297 ORTHO05D005213 2.0e-55 222.2 212 56.1
CSS0029755 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 2.7e-49 201.8 594 31.3
Cc02_g24300 Coffea canephora HOM05D004297 ORTHO05D005213 9.7e-47 193.4 172 58.7
SEGI_39496 Sequoiadendron giganteum HOM05D004297 ORTHO05D005213 2.2e-46 192.2 256 41.8
BolC6t37919H Brassica oleracea HOM05D004297 ORTHO05D005213 2.8e-46 191.8 217 54.8
C06p27520 Brassica napus HOM05D004297 ORTHO05D005213 1.6e-44 186.0 217 52.1
Lsat_1_v5_gn_9_9281 Lactuca sativa HOM05D004297 ORTHO05D005213 3.8e-43 181.4 328 41.8
Cfa026409 Carpinus fangiana HOM05D004297 ORTHO05D005213 1.5e-34 152.9 703 22.6
Rhsim06G0128600 Rhododendron simsii HOM05D000263 ORTHO05D000213 7.2e-34 150.6 183 50.8
MD11G1239400 Malus domestica HOM05D004297 ORTHO05D005213 1.8e-32 146.0 87 80.5
arahy.Tifrunner.gnm1.ann1.K3XHZI Arachis hypogaea HOM05D004297 ORTHO05D005213 5.4e-29 134.4 87 73.6
CSS0014634 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 8.5e-27 127.1 164 49.4
SEGI_34049 Sequoiadendron giganteum HOM05D004297 ORTHO05D005213 3.2e-26 125.2 87 70.1
SEGI_01640 Sequoiadendron giganteum HOM05D004297 ORTHO05D005213 1.6e-25 122.9 85 64.7
Rhsim06G0126700 Rhododendron simsii HOM05D000263 ORTHO05D000213 4.7e-25 121.3 164 46.3
Rhsim12G0103300 Rhododendron simsii HOM05D004297 ORTHO05D339569 2.3e-24 119.0 162 45.7
Cpa.g.sc11.39 Carica papaya HOM05D004297 ORTHO05D005213 5.7e-23 114.4 64 81.2
AT5G28442 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 2.0e-20 105.9 74 70.3
CARHR057240 Cardamine hirsuta HOM05D004297 ORTHO05D005213 9.5e-18 97.1 67 65.7
Hma1.2p1_0733F.1_g210090 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 1.2e-17 96.7 60 76.7
RcHm_v2.0_Chr1g0356921 Rosa chinensis HOM05D004297 ORTHO05D005213 1.0e-16 93.6 64 70.3
RcHm_v2.0_Chr1g0356901 Rosa chinensis HOM05D004297 ORTHO05D005213 1.7e-14 86.3 95 51.6
Rhsim06G0128400 Rhododendron simsii HOM05D000263 ORTHO05D000213 6.4e-14 84.3 56 73.2
RcHm_v2.0_Chr1g0356891 Rosa chinensis HOM05D004297 ORTHO05D005213 1.1e-13 83.6 44 84.1
CSS0021987 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 4.1e-13 81.6 80 56.2
VMungo0464G0057 Vigna mungo HOM05D004297 ORTHO05D005213 5.4e-13 81.3 84 51.2
Lsat_1_v5_gn_4_49241 Lactuca sativa HOM05D004297 ORTHO05D005213 2.5e-10 72.4 55 56.4
arahy.Tifrunner.gnm1.ann1.WWIQ7K Arachis hypogaea HOM05D004297 ORTHO05D005213 3.3e-10 72.0 58 65.5
RcHm_v2.0_Chr1g0356911 Rosa chinensis HOM05D004297 ORTHO05D005213 6.2e-09 67.8 34 79.4
arahy.Tifrunner.gnm1.ann1.ABA0S6 Arachis hypogaea HOM05D004297 ORTHO05D005213 3.1e-08 65.5 48 60.4
Ah.05g180910 Amaranthus hybridus HOM05D000862 ORTHO05D000943 4.0e-08 65.1 49 65.3
arahy.Tifrunner.gnm1.ann1.19V8U8 Arachis hypogaea HOM05D000005 ORTHO05D000012 4.0e-08 65.1 71 47.9
CSS0028965 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 2.0e-07 62.8 43 62.8


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