Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 3.4e-140 502.3 388 100.0
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 2.2e-115 419.9 390 87.7
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 1.9e-111 406.8 225 90.2
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 3.0e-104 382.9 224 84.8
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 5.1e-104 382.1 389 77.9
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 8.7e-104 381.3 226 82.7
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 8.7e-104 381.3 224 84.4
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.9e-103 380.2 388 79.1
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 2.5e-103 379.8 224 86.2
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 9.6e-103 377.9 224 84.8
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 9.6e-103 377.9 224 82.6
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 1.3e-102 377.5 226 84.5
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 1.3e-102 377.5 225 85.3
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 2.1e-102 376.7 224 84.4
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 3.6e-102 375.9 388 79.1
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 6.2e-102 375.2 224 81.7
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 8.1e-102 374.8 224 84.8
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 1.1e-101 374.4 225 81.8
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 1.4e-101 374.0 225 81.8
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 1.4e-101 374.0 226 83.2
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 1.8e-101 373.6 224 81.7
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 2.4e-101 373.2 225 81.3
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 2.4e-101 373.2 226 83.2
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 2.4e-101 373.2 226 83.2
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 3.1e-101 372.9 388 76.5
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 5.3e-101 372.1 223 83.9
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 6.9e-101 371.7 226 81.0
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 6.9e-101 371.7 226 81.0
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 6.9e-101 371.7 224 83.9
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 9.0e-101 371.3 222 82.9
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 9.0e-101 371.3 224 83.0
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 1.2e-100 370.9 225 83.6
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 1.5e-100 370.5 225 81.8
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 1.5e-100 370.5 221 84.2
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 2.0e-100 370.2 225 83.1
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 2.0e-100 370.2 224 82.1
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 2.0e-100 370.2 224 83.0
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 2.0e-100 370.2 225 82.7
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 2.6e-100 369.8 226 80.5
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 2.6e-100 369.8 224 82.1
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 2.6e-100 369.8 224 82.1
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 2.6e-100 369.8 225 80.4
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 3.4e-100 369.4 224 81.2
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 4.4e-100 369.0 224 80.8
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 4.4e-100 369.0 224 82.6
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 5.8e-100 368.6 223 80.7
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 5.8e-100 368.6 224 83.0
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 7.6e-100 368.2 223 81.2
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 7.6e-100 368.2 226 78.3
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 7.6e-100 368.2 226 78.3
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 7.6e-100 368.2 226 78.3
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 9.9e-100 367.9 224 83.5
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 1.7e-99 367.1 225 80.9
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.7e-99 367.1 223 80.3
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.2e-99 366.7 224 83.5
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.2e-99 366.7 224 83.5
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 2.2e-99 366.7 220 85.9
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 4.9e-99 365.5 223 80.7
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 4.9e-99 365.5 224 78.6
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 8.4e-99 364.8 244 76.6
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 3.2e-98 362.8 224 80.8
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 5.4e-98 362.1 224 80.8
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 2.7e-97 359.8 225 81.3
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 6.0e-97 358.6 242 74.8
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 1.0e-96 357.8 190 87.9
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 1.3e-96 357.5 224 79.0
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 1.7e-96 357.1 224 80.8
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 1.7e-96 357.1 190 87.9
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 3.0e-96 356.3 188 88.3
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 6.6e-96 355.1 190 88.4
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 8.7e-96 354.8 225 79.1
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 1.5e-95 354.0 223 79.8
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 1.5e-95 354.0 223 79.8
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 1.5e-95 354.0 223 79.8
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 1.5e-95 354.0 225 78.7
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 1.9e-95 353.6 223 79.8
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 2.5e-95 353.2 221 80.5
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 3.3e-95 352.8 190 87.4
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 4.3e-95 352.4 190 86.8
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 4.3e-95 352.4 190 85.8
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 5.6e-95 352.1 237 75.5
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 7.3e-95 351.7 190 85.8
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 7.3e-95 351.7 188 86.2
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 9.6e-95 351.3 439 72.2
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 1.3e-94 350.9 190 85.8
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 1.6e-94 350.5 396 56.1
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 3.6e-94 349.4 217 81.1
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 3.6e-94 349.4 217 81.1
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 4.8e-94 349.0 190 86.3
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 6.2e-94 348.6 190 85.3
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 6.2e-94 348.6 190 85.3
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 8.1e-94 348.2 190 85.8
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 1.8e-93 347.1 190 84.2
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 4.0e-93 345.9 448 72.3
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 5.3e-93 345.5 190 85.3
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 6.4e-91 338.6 190 84.2
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 4.2e-90 335.9 191 81.7
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 4.2e-90 335.9 190 82.6
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 1.6e-89 334.0 213 75.1
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 2.1e-89 333.6 190 82.6
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 7.9e-89 331.6 197 81.2
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 2.3e-88 330.1 216 75.9
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 1.1e-87 327.8 226 73.5
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 2.5e-87 326.6 190 81.1
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 2.8e-86 323.2 190 80.5
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 4.8e-86 322.4 266 63.9
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 4.8e-86 322.4 218 72.9
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 1.1e-85 321.2 211 74.4
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 3.4e-84 316.2 167 88.0
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 4.2e-82 309.3 190 76.8
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 5.5e-82 308.9 218 72.9
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 1.6e-81 307.4 200 76.5
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 4.6e-81 305.8 167 86.2
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 1.1e-79 301.2 188 76.6
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 4.8e-78 295.8 224 72.3
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 1.8e-77 293.9 232 65.5
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 2.2e-70 270.4 190 63.2
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 2.6e-68 263.5 230 63.5
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 6.7e-56 222.2 185 55.1
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 1.5e-52 211.1 184 54.9
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 5.5e-50 202.6 173 62.4
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 2.7e-49 200.3 192 52.6
Lj9C202T10 Lonicera japonica HOM05D005421 ORTHO05D007601 2.8e-46 190.3 97 92.8
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 5.9e-44 182.6 130 74.6
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 9.4e-42 175.3 126 69.8
SEGI_13779 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 3.0e-40 170.2 94 84.0
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 1.9e-26 124.4 89 79.8
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 3.6e-25 120.2 90 65.6
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 1.7e-22 111.3 70 72.9
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 1.7e-22 111.3 70 72.9
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 5.2e-16 89.7 51 78.4
BcaB06g27834 Brassica carinata HOM05D005421 ORTHO05D031867 1.6e-12 78.2 69 60.9
RcHm_v2.0_Chr7g0209371 Rosa chinensis HOM05D005421 ORTHO05D007601 2.0e-12 77.8 53 62.3
Oeu029357.1 Olea europaea HOM05D005421 ORTHO05D026565 7.8e-12 75.9 57 77.2
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 4.3e-10 70.1 42 78.6
BcaB06g29163 Brassica carinata HOM05D005421 ORTHO05D031077 8.3e-06 55.8 29 79.3


User provided reference genes

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