Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00941 Erythranthe guttata HOM05D008159 ORTHO05D009498 1.1e-46 189.5 90 100.0
Migut.N00944 Erythranthe guttata HOM05D008159 ORTHO05D009498 2.5e-30 135.2 100 67.0
Cc02_g35240 Coffea canephora HOM05D008159 ORTHO05D009498 1.2e-21 106.3 99 56.6
Oeu053734.1 Olea europaea HOM05D008159 ORTHO05D009498 2.8e-21 105.1 106 54.7
PGSC0003DMG402002794 Solanum tuberosum HOM05D008159 ORTHO05D009498 4.2e-17 91.3 96 54.2
DCAR_005440 Daucus carota HOM05D008159 ORTHO05D009498 5.4e-17 90.9 90 53.3
Lalb_Chr06g0167441 Lupinus albus HOM05D008159 ORTHO05D009498 2.3e-15 85.5 85 52.9
Lalb_Chr21g0310201 Lupinus albus HOM05D008159 ORTHO05D009498 3.0e-15 85.1 85 51.8
Eucgr.H03298 Eucalyptus grandis HOM05D008159 ORTHO05D009498 1.6e-13 79.3 96 47.9
CiPaw.07G030900 Carya illinoinensis HOM05D008159 ORTHO05D009498 2.1e-13 79.0 99 49.5
QL03p016142 Quercus lobata HOM05D008159 ORTHO05D009498 2.4e-12 75.5 99 49.5
QL03p016152 Quercus lobata HOM05D008159 ORTHO05D009498 2.4e-12 75.5 99 49.5
QL03p016180 Quercus lobata HOM05D008159 ORTHO05D009498 2.4e-12 75.5 99 49.5
Glyma.15G138300 Glycine max HOM05D008159 ORTHO05D009498 1.2e-11 73.2 87 42.5
Cfa006721 Carpinus fangiana HOM05D008159 ORTHO05D009498 5.8e-11 70.9 96 49.0
FvH4_4g20450 Fragaria vesca HOM05D008159 ORTHO05D009498 7.6e-11 70.5 95 48.4
FAN12G1128 Fragaria x ananassa HOM05D008159 ORTHO05D009498 7.6e-11 70.5 95 48.4
Phvul.007G202400 Phaseolus vulgaris HOM05D008159 ORTHO05D009498 9.9e-11 70.1 67 55.2
Manes.09G177901 Manihot esculenta HOM05D008159 ORTHO05D009498 1.3e-10 69.7 112 43.8
RcHm_v2.0_Chr4g0425921 Rosa chinensis HOM05D008159 ORTHO05D009498 2.2e-10 68.9 95 48.4
FAN07G1405 Fragaria x ananassa HOM05D008159 ORTHO05D009498 2.9e-10 68.6 94 46.8
Cc03_g00570 Coffea canephora HOM05D008159 ORTHO05D009498 1.4e-09 66.2 91 44.0
Prupe.1G113600 Prunus persica HOM05D008159 ORTHO05D009498 2.4e-09 65.5 74 47.3
Ciclev10003072m.g Citrus clementina HOM05D009594 ORTHO05D009498 3.2e-09 65.1 72 55.6
Glyma.20G095900 Glycine max HOM05D009594 ORTHO05D009498 3.2e-09 65.1 82 46.3
Manes.15G002400 Manihot esculenta HOM05D008159 ORTHO05D009498 3.2e-09 65.1 87 43.7
Cpa.g.sc48.176 Carica papaya HOM05D009594 ORTHO05D009498 5.4e-09 64.3 78 50.0
Potri.005G011400 Populus trichocarpa HOM05D009594 ORTHO05D009498 5.4e-09 64.3 95 43.2
Sed0007216 Sechium edule HOM05D008159 ORTHO05D009498 7.1e-09 63.9 86 43.0
Ciclev10006357m.g Citrus clementina HOM05D008159 ORTHO05D009498 9.3e-09 63.5 87 43.7
EL10Ac3g05544 Beta vulgaris HOM05D008159 ORTHO05D009498 1.2e-08 63.2 95 43.2
Eucgr.B03969 Eucalyptus grandis HOM05D008159 ORTHO05D009498 1.2e-08 63.2 85 43.5
Thhalv10005279m.g Eutrema salsugineum HOM05D009594 ORTHO05D009498 1.2e-08 63.2 78 47.4
CARHR186770 Cardamine hirsuta HOM05D009594 ORTHO05D009498 1.6e-08 62.8 79 48.1
Prupe.6G310900 Prunus persica HOM05D009594 ORTHO05D009498 1.6e-08 62.8 56 60.7
TAR365G1059 Trochodendron aralioides HOM05D001895 ORTHO05D002082 1.6e-08 62.8 95 41.1
CiPaw.01G135400 Carya illinoinensis HOM05D008159 ORTHO05D009498 2.1e-08 62.4 87 43.7
RcHm_v2.0_Chr3g0457471 Rosa chinensis HOM05D009594 ORTHO05D009498 2.1e-08 62.4 46 69.6
Aa31LG11G9850 Aethionema arabicum HOM05D009594 ORTHO05D009498 2.7e-08 62.0 90 46.7
Atru.chr4.3059 Acer truncatum HOM05D008159 ORTHO05D009498 3.5e-08 61.6 89 42.7
Carub.0006s2444 Capsella rubella HOM05D009594 ORTHO05D009498 3.5e-08 61.6 57 57.9
Potri.013G007500 Populus trichocarpa HOM05D009594 ORTHO05D009498 3.5e-08 61.6 95 46.3
Thecc.04G305200 Theobroma cacao HOM05D008159 ORTHO05D009498 3.5e-08 61.6 87 42.5
vmacro07951 Vaccinium macrocarpon HOM05D008159 ORTHO05D009498 3.5e-08 61.6 74 47.3
Potri.008G102400 Populus trichocarpa HOM05D008159 ORTHO05D009498 4.6e-08 61.2 73 45.2
THA.LOC109117014 Tarenaya hassleriana HOM05D009594 ORTHO05D009498 4.6e-08 61.2 83 51.8
Lj6g0007339 Lotus japonicus HOM05D008159 ORTHO05D009498 6.0e-08 60.8 86 41.9
Gohir.A11G274300 Gossypium hirsutum HOM05D008159 ORTHO05D009498 1.0e-07 60.1 64 48.4
Duzib052G0731 Durio zibethinus HOM05D008159 ORTHO05D009498 1.3e-07 59.7 83 44.6
AL6G38660 Arabidopsis lyrata HOM05D009594 ORTHO05D009498 1.7e-07 59.3 69 52.2
AT5G26790 Arabidopsis thaliana HOM05D009594 ORTHO05D009498 1.7e-07 59.3 69 52.2
Gohir.D11G284500 Gossypium hirsutum HOM05D008159 ORTHO05D009498 1.7e-07 59.3 86 41.9
Gorai.007G307600 Gossypium raimondii HOM05D008159 ORTHO05D009498 1.7e-07 59.3 86 41.9
Potri.010G148300 Populus trichocarpa HOM05D008159 ORTHO05D009498 1.7e-07 59.3 88 42.0
Rhsim04G0241600 Rhododendron simsii HOM05D008159 ORTHO05D009498 1.7e-07 59.3 87 42.5
CARHR287950 Cardamine hirsuta HOM05D008159 ORTHO05D009498 2.3e-07 58.9 88 42.0
MD13G1149600 Malus domestica HOM05D008159 ORTHO05D009498 3.9e-07 58.2 94 40.4
Ah.06g196160 Amaranthus hybridus HOM05D009594 ORTHO05D009498 6.6e-07 57.4 91 41.8
THA.LOC109116907 Tarenaya hassleriana HOM05D008159 ORTHO05D009498 6.6e-07 57.4 88 42.0
A06p38300 Brassica napus HOM05D008159 ORTHO05D009498 1.5e-06 56.2 88 38.6
BraA06t26745Z Brassica rapa HOM05D008159 ORTHO05D009498 1.5e-06 56.2 88 38.6
Eucgr.H04070 Eucalyptus grandis HOM05D008159 ORTHO05D009498 3.3e-06 55.1 87 41.4
Prupe.6G311000 Prunus persica HOM05D009594 ORTHO05D009498 3.3e-06 55.1 53 58.5
Sp2g19830 Schrenkiella parvula HOM05D008159 ORTHO05D009498 3.3e-06 55.1 88 37.5
SpUn0021_0020 Schrenkiella parvula HOM05D008159 ORTHO05D009498 3.3e-06 55.1 88 37.5
C07p39940 Brassica napus HOM05D008159 ORTHO05D009498 5.6e-06 54.3 70 40.0
BolC7t44526H Brassica oleracea HOM05D008159 ORTHO05D009498 5.6e-06 54.3 70 40.0
Carub.0008s0940 Capsella rubella HOM05D008159 ORTHO05D009498 5.6e-06 54.3 88 39.8
Duzib177G0425 Durio zibethinus HOM05D009594 ORTHO05D009498 5.6e-06 54.3 93 40.9
Thhalv10005580m.g Eutrema salsugineum HOM05D008159 ORTHO05D009498 5.6e-06 54.3 88 37.5
MD16G1149900 Malus domestica HOM05D008159 ORTHO05D009498 5.6e-06 54.3 95 40.0
Phvul.006G119900 Phaseolus vulgaris HOM05D000949 ORTHO05D009565 5.6e-06 54.3 83 34.9
Gohir.A10G174300 Gossypium hirsutum HOM05D008159 ORTHO05D009498 9.6e-06 53.5 33 66.7
Gohir.D10G180800 Gossypium hirsutum HOM05D008159 ORTHO05D009498 9.6e-06 53.5 33 66.7


User provided reference genes

Program Settings