Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00865 Erythranthe guttata HOM05D012176 ORTHO05D014468 4.0e-99 364.8 185 100.0
Migut.J00709 Erythranthe guttata HOM05D012176 ORTHO05D002052 1.4e-35 153.7 184 46.7
SGA_v2.0_scaffold31G12844 Striga asiatica HOM05D012176 ORTHO05D014468 1.5e-34 150.2 192 45.3
MSTRG.5900 Avicennia marina HOM05D012176 ORTHO05D014468 3.8e-25 119.0 191 37.7
MSTRG.19312 Avicennia marina HOM05D012176 ORTHO05D014468 2.1e-23 113.2 164 39.0
Oeu055534.1 Olea europaea HOM05D012176 ORTHO05D014468 1.4e-19 100.5 189 34.4
Oeu050407.1 Olea europaea HOM05D012176 ORTHO05D014468 2.1e-15 86.7 186 32.3
Rhsim03G0065900 Rhododendron simsii HOM05D008136 ORTHO05D002052 6.1e-15 85.1 187 31.6
SGA_v2.0_scaffold35G14009 Striga asiatica HOM05D012176 ORTHO05D014468 2.6e-13 79.7 82 51.2
Sabra06G0157200 Salix brachista HOM05D008136 ORTHO05D002052 1.7e-12 77.0 169 31.4
Nitab4.5_0002958g0020 Nicotiana tabacum HOM05D012176 ORTHO05D014468 2.8e-12 76.3 184 26.6
Dinv31752 Davidia involucrata HOM05D002687 ORTHO05D022209 1.8e-11 73.6 172 32.0
Nitab4.5_0000020g0110 Nicotiana tabacum HOM05D012176 ORTHO05D014468 1.8e-11 73.6 184 26.6
Duzib106G1810 Durio zibethinus HOM05D008136 ORTHO05D002052 1.2e-10 70.9 185 29.7
Potri.006G204000 Populus trichocarpa HOM05D008136 ORTHO05D002052 1.6e-10 70.5 188 29.3
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.6e-10 70.5 183 28.4
COL.COLO4_29586 Corchorus olitorius HOM05D008136 ORTHO05D002052 2.0e-10 70.1 187 30.5
Duzib093G0447 Durio zibethinus HOM05D008136 ORTHO05D002052 2.7e-10 69.7 164 28.7
Medtr4g051652 Medicago truncatula HOM05D002687 ORTHO05D002052 3.5e-10 69.3 186 28.0
PGSC0003DMG400016421 Solanum tuberosum HOM05D012176 ORTHO05D014468 1.3e-09 67.4 184 25.5
QL01p011302 Quercus lobata HOM05D002687 ORTHO05D002052 2.9e-09 66.2 179 27.4
MD03G1153500 Malus domestica HOM05D002687 ORTHO05D002052 3.8e-09 65.9 174 26.4
CARHR162230 Cardamine hirsuta HOM05D008136 ORTHO05D002052 5.0e-09 65.5 190 24.7
Eucgr.A02595 Eucalyptus grandis HOM05D008136 ORTHO05D002052 5.0e-09 65.5 196 28.1
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 8.6e-09 64.7 161 28.6
TAR633G1301 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.6e-09 64.7 171 27.5
Thecc.05G103000 Theobroma cacao HOM05D008136 ORTHO05D002052 1.1e-08 64.3 185 28.1
CANSAT64G0025 Cannabis sativa HOM05D008136 ORTHO05D002052 1.5e-08 63.9 160 26.9
Ca_01639_v3 Cicer arietinum L. HOM05D002687 ORTHO05D002052 1.5e-08 63.9 161 28.0
Gohir.A07G112600 Gossypium hirsutum HOM05D002687 ORTHO05D002052 1.5e-08 63.9 171 27.5
QL07p036916 Quercus lobata HOM05D008136 ORTHO05D002052 1.5e-08 63.9 189 28.6
MD00G1129000 Malus domestica HOM05D002687 ORTHO05D002052 2.5e-08 63.2 174 27.0
Thecc.09G275200 Theobroma cacao HOM05D002687 ORTHO05D002052 3.2e-08 62.8 171 26.3
Actinidia32046 Actinidia chinensis HOM05D000182 ORTHO05D000112 5.5e-08 62.0 166 28.9
Cc06_g06470 Coffea canephora HOM05D022101 ORTHO05D022209 7.2e-08 61.6 168 29.8
Manes.11G165500 Manihot esculenta HOM05D002687 ORTHO05D002052 7.2e-08 61.6 188 26.1
Medtr2g087000 Medicago truncatula HOM05D002687 ORTHO05D002052 9.5e-08 61.2 172 26.7
Phvul.007G268400 Phaseolus vulgaris HOM05D008136 ORTHO05D002052 9.5e-08 61.2 182 27.5
Sp5g09840 Schrenkiella parvula HOM05D008136 ORTHO05D002052 9.5e-08 61.2 190 24.7
CiPaw.14G096100 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.2e-07 60.8 178 26.4
Gohir.D07G116000 Gossypium hirsutum HOM05D002687 ORTHO05D002052 1.2e-07 60.8 171 25.7
Nn6g34716 Nelumbo nucifera HOM05D002687 ORTHO05D002052 1.2e-07 60.8 180 27.8
Eucgr.B03820 Eucalyptus grandis HOM05D002687 ORTHO05D002052 1.6e-07 60.5 183 26.8
Gohir.D09G097800 Gossypium hirsutum HOM05D002687 ORTHO05D002052 1.6e-07 60.5 178 26.4
Gorai.006G114600 Gossypium raimondii HOM05D002687 ORTHO05D002052 1.6e-07 60.5 178 26.4
Manes.08G032700 Manihot esculenta HOM05D008136 ORTHO05D002052 2.1e-07 60.1 187 25.7
Sabra16G0125800 Salix brachista HOM05D002687 ORTHO05D002052 2.1e-07 60.1 178 25.8
Phvul.011G098100 Phaseolus vulgaris HOM05D002687 ORTHO05D002052 2.8e-07 59.7 182 28.6
THA.LOC104825213 Tarenaya hassleriana HOM05D008136 ORTHO05D002052 2.8e-07 59.7 195 25.6
Haze_23313 Corylus avellana HOM05D002687 ORTHO05D002052 3.6e-07 59.3 182 29.1
Gorai.001G124500 Gossypium raimondii HOM05D002687 ORTHO05D002052 3.6e-07 59.3 171 25.7
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 3.6e-07 59.3 165 27.9
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 4.7e-07 58.9 169 24.3
Thhalv10010982m.g Eutrema salsugineum HOM05D008136 ORTHO05D002052 6.1e-07 58.5 190 23.7
CsaV3_6G038540 Cucumis sativus L. HOM05D002687 ORTHO05D002052 8.0e-07 58.2 163 25.8
Potri.009G019800 Populus trichocarpa HOM05D002687 ORTHO05D002052 8.0e-07 58.2 178 28.1
Cfa009948 Carpinus fangiana HOM05D002687 ORTHO05D002052 1.0e-06 57.8 182 26.4
CiPaw.13G131000 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.0e-06 57.8 175 25.1
AT3G52460 Arabidopsis thaliana HOM05D008136 ORTHO05D002052 1.4e-06 57.4 168 25.0
MELO3C014517.2 Cucumis melo HOM05D002687 ORTHO05D002052 1.4e-06 57.4 163 23.9
Sed0011968 Sechium edule HOM05D008136 ORTHO05D002052 1.4e-06 57.4 169 26.0
Atru.chr3.3136 Acer truncatum HOM05D002687 ORTHO05D002052 1.8e-06 57.0 176 22.7
BcaC07g39611 Brassica carinata HOM05D008136 ORTHO05D002052 1.8e-06 57.0 189 23.8
C08p27700 Brassica napus HOM05D008136 ORTHO05D002052 1.8e-06 57.0 189 23.8
BolC8t50390H Brassica oleracea HOM05D008136 ORTHO05D002052 1.8e-06 57.0 189 23.8
DCAR_003063 Daucus carota HOM05D008136 ORTHO05D014468 1.8e-06 57.0 180 25.6
TWI74G0144 Tripterygium wilfordii HOM05D008136 ORTHO05D002052 1.8e-06 57.0 193 27.5
BcaB01g00366 Brassica carinata HOM05D008136 ORTHO05D002052 2.3e-06 56.6 189 23.8
Nn6g34711 Nelumbo nucifera HOM05D002687 ORTHO05D002052 2.3e-06 56.6 187 24.6
RcHm_v2.0_Chr5g0048091 Rosa chinensis HOM05D002687 ORTHO05D002052 2.3e-06 56.6 163 27.0
A09p45540 Brassica napus HOM05D008136 ORTHO05D002052 4.0e-06 55.8 189 23.8
BraA09t40016Z Brassica rapa HOM05D008136 ORTHO05D002052 4.0e-06 55.8 189 23.8
CiPaw.10G016800 Carya illinoinensis HOM05D008136 ORTHO05D002052 4.0e-06 55.8 161 28.6
Psat5g260320 Pisum sativum HOM05D002687 ORTHO05D002052 4.0e-06 55.8 161 25.5
Medtr2g087080 Medicago truncatula HOM05D002687 ORTHO05D002052 5.2e-06 55.5 180 23.9
QL07p036911 Quercus lobata HOM05D008136 ORTHO05D002052 5.2e-06 55.5 190 25.8
TWI79G0900 Tripterygium wilfordii HOM05D002687 ORTHO05D002052 5.2e-06 55.5 176 26.1
Sc21g0006860 Simmondsia chinensis HOM05D002687 ORTHO05D002052 6.8e-06 55.1 167 25.7
THA.LOC104823630 Tarenaya hassleriana HOM05D008136 ORTHO05D002052 6.8e-06 55.1 168 25.6
Atru.chr8.1380 Acer truncatum HOM05D008136 ORTHO05D002052 8.8e-06 54.7 191 22.0
BcaC06g32916 Brassica carinata HOM05D008136 ORTHO05D002052 8.8e-06 54.7 194 24.2


User provided reference genes

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