Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g034765 Medicago truncatula HOM05D001219 ORTHO05D001017 9.7e-80 300.1 149 100.0
Medtr4g006280 Medicago truncatula HOM05D001219 ORTHO05D001017 2.6e-32 142.5 126 65.9
TPR.G38799 Trifolium pratense HOM05D001219 ORTHO05D001017 5.6e-19 98.2 137 45.3
TPR.G29726 Trifolium pratense HOM05D001219 ORTHO05D001017 1.8e-17 93.2 126 46.8
TPR.G15687 Trifolium pratense HOM05D001219 ORTHO05D001017 6.9e-17 91.3 130 44.6
TPR.G15180 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-16 90.1 133 43.6
Medtr6g016725 Medicago truncatula HOM05D001219 ORTHO05D001017 9.9e-16 87.4 157 40.8
Medtr7g029535 Medicago truncatula HOM05D001219 ORTHO05D001017 9.9e-16 87.4 141 44.7
Psat3g014520 Pisum sativum HOM05D001219 ORTHO05D001017 1.7e-15 86.7 134 43.3
TPR.G28774 Trifolium pratense HOM05D001219 ORTHO05D001017 3.8e-15 85.5 78 59.0
Medtr3g036270 Medicago truncatula HOM05D001219 ORTHO05D001017 4.9e-15 85.1 129 45.0
Medtr4g008420 Medicago truncatula HOM05D001219 ORTHO05D001017 6.4e-15 84.7 125 46.4
Medtr5g068550 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-13 80.5 133 42.9
TPR.G16396 Trifolium pratense HOM05D001219 ORTHO05D001017 1.6e-13 80.1 135 40.7
TPR.G9967 Trifolium pratense HOM05D001219 ORTHO05D001017 2.1e-13 79.7 132 43.2
Medtr5g039080 Medicago truncatula HOM05D001219 ORTHO05D001017 2.7e-13 79.3 131 45.0
TPR.G15128 Trifolium pratense HOM05D001219 ORTHO05D001017 2.7e-13 79.3 125 41.6
Medtr6g080560 Medicago truncatula HOM05D001219 ORTHO05D001017 3.5e-13 79.0 133 41.4
Medtr8g076010 Medicago truncatula HOM05D001219 ORTHO05D001017 3.5e-13 79.0 148 42.6
TPR.G15115 Trifolium pratense HOM05D001219 ORTHO05D001017 3.5e-13 79.0 142 40.1
Medtr5g095830 Medicago truncatula HOM05D001219 ORTHO05D001017 4.6e-13 78.6 128 42.2
Psat0s1674g0080 Pisum sativum HOM05D001219 ORTHO05D001017 4.6e-13 78.6 130 39.2
TPR.G38764 Trifolium pratense HOM05D001219 ORTHO05D001017 4.6e-13 78.6 134 43.3
Medtr6g025290 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-12 76.6 137 41.6
Medtr3g006050 Medicago truncatula HOM05D001219 ORTHO05D001017 2.3e-12 76.3 130 43.1
Medtr1g075040 Medicago truncatula HOM05D001219 ORTHO05D001017 3.0e-12 75.9 128 42.2
TPR.G38803 Trifolium pratense HOM05D001219 ORTHO05D001017 3.0e-12 75.9 129 42.6
Medtr4g006460 Medicago truncatula HOM05D001219 ORTHO05D001017 3.9e-12 75.5 132 43.2
Medtr4g006450 Medicago truncatula HOM05D001219 ORTHO05D001017 5.1e-12 75.1 129 44.2
Medtr2g007590 Medicago truncatula HOM05D001219 ORTHO05D001017 6.7e-12 74.7 87 55.2
Medtr6g016765 Medicago truncatula HOM05D001219 ORTHO05D001017 6.7e-12 74.7 135 39.3
Medtr6g022820 Medicago truncatula HOM05D001219 ORTHO05D001017 6.7e-12 74.7 128 43.0
TPR.G22462 Trifolium pratense HOM05D001219 ORTHO05D001017 8.7e-12 74.3 145 37.2
TPR.G29719 Trifolium pratense HOM05D001219 ORTHO05D001017 8.7e-12 74.3 128 42.2
Ca_04901_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.1e-11 73.9 138 40.6
Ca_20555_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.1e-11 73.9 134 40.3
Medtr6g016915 Medicago truncatula HOM05D001219 ORTHO05D001017 1.9e-11 73.2 106 47.2
Medtr4g133640 Medicago truncatula HOM05D001219 ORTHO05D001017 2.5e-11 72.8 136 40.4
Medtr5g067490 Medicago truncatula HOM05D001219 ORTHO05D001017 2.5e-11 72.8 124 44.4
Medtr8g045190 Medicago truncatula HOM05D001219 ORTHO05D001017 3.3e-11 72.4 127 39.4
Lalb_Chr01g0012921 Lupinus albus HOM05D001219 ORTHO05D001017 4.3e-11 72.0 132 37.1
TPR.G29734 Trifolium pratense HOM05D001219 ORTHO05D001017 4.3e-11 72.0 162 35.8
Psat7g112360 Pisum sativum HOM05D001219 ORTHO05D001017 5.6e-11 71.6 144 38.2
Medtr4g008440 Medicago truncatula HOM05D001219 ORTHO05D001017 7.4e-11 71.2 130 38.5
Medtr4g035280 Medicago truncatula HOM05D001219 ORTHO05D001017 7.4e-11 71.2 138 37.7
Medtr6g018580 Medicago truncatula HOM05D001219 ORTHO05D001017 7.4e-11 71.2 137 40.1
Medtr4g059340 Medicago truncatula HOM05D001219 ORTHO05D001017 9.6e-11 70.9 129 40.3
Medtr8g080900 Medicago truncatula HOM05D001219 ORTHO05D001017 9.6e-11 70.9 90 47.8
TPR.G15122 Trifolium pratense HOM05D001219 ORTHO05D001017 9.6e-11 70.9 147 36.1
Medtr4g019320 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-10 70.5 155 36.1
Lj3g0021238 Lotus japonicus HOM05D001219 ORTHO05D001017 3.7e-10 68.9 134 38.1
Psat3g131680 Pisum sativum HOM05D001219 ORTHO05D001017 3.7e-10 68.9 158 37.3
Psat5g104160 Pisum sativum HOM05D001219 ORTHO05D001017 3.7e-10 68.9 130 37.7
Medtr1g115380 Medicago truncatula HOM05D001219 ORTHO05D001017 4.8e-10 68.6 137 35.8
Medtr4g006240 Medicago truncatula HOM05D001219 ORTHO05D001017 4.8e-10 68.6 134 38.1
Medtr4g011120 Medicago truncatula HOM05D001219 ORTHO05D001017 6.2e-10 68.2 128 36.7
Medtr8g037780 Medicago truncatula HOM05D001219 ORTHO05D001017 6.2e-10 68.2 134 37.3
Psat7g041280 Pisum sativum HOM05D001219 ORTHO05D001017 6.2e-10 68.2 126 38.9
Psat7g261440 Pisum sativum HOM05D001219 ORTHO05D001017 6.2e-10 68.2 126 38.9
TPR.G26088 Trifolium pratense HOM05D000474 ORTHO05D003648 6.2e-10 68.2 133 36.8
Psat7g261480 Pisum sativum HOM05D001219 ORTHO05D001017 8.1e-10 67.8 126 38.9
Medtr1g023530 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-09 66.6 146 36.3
Medtr4g006520 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-09 66.6 83 50.6
Medtr4g010630 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-09 66.6 135 35.6
TPR.G15691 Trifolium pratense HOM05D001219 ORTHO05D001017 1.8e-09 66.6 128 38.3
Medtr6g016705 Medicago truncatula HOM05D001219 ORTHO05D001017 2.4e-09 66.2 134 37.3
TPR.G9682 Trifolium pratense HOM05D001219 ORTHO05D001017 3.1e-09 65.9 145 39.3
Lj3g0011098 Lotus japonicus HOM05D001219 ORTHO05D001017 4.0e-09 65.5 158 34.2
Medtr8g017160 Medicago truncatula HOM05D001219 ORTHO05D001017 4.0e-09 65.5 136 38.2
TPR.G15720 Trifolium pratense HOM05D001219 ORTHO05D001017 4.0e-09 65.5 134 37.3
Medtr7g024310 Medicago truncatula HOM05D001219 ORTHO05D001017 5.3e-09 65.1 121 38.0
Psat7g258720 Pisum sativum HOM05D001219 ORTHO05D001017 5.3e-09 65.1 106 45.3
TPR.G1358 Trifolium pratense HOM05D001219 ORTHO05D001017 5.3e-09 65.1 132 38.6
Medtr0105s0110 Medicago truncatula HOM05D001219 ORTHO05D001017 6.9e-09 64.7 100 41.0
Medtr0345s0020 Medicago truncatula HOM05D001219 ORTHO05D001017 6.9e-09 64.7 100 41.0
Medtr1155s0010 Medicago truncatula HOM05D001219 ORTHO05D001017 6.9e-09 64.7 100 41.0
Medtr4g008470 Medicago truncatula HOM05D001219 ORTHO05D001017 9.0e-09 64.3 93 46.2
TPR.G8603 Trifolium pratense HOM05D001219 ORTHO05D001017 9.0e-09 64.3 87 49.4
Medtr3g110150 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-08 63.9 129 38.0
Medtr4g010750 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-08 63.9 163 34.4
Medtr5g075860 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-08 63.9 142 35.2
Psat7g261360 Pisum sativum HOM05D001219 ORTHO05D001017 1.2e-08 63.9 153 32.7
THA.LOC104812449 Tarenaya hassleriana HOM05D001219 ORTHO05D001017 1.2e-08 63.9 143 34.3
Medtr6g016750 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-08 63.5 129 41.1
TPR.G9668 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-08 63.5 129 37.2
Medtr6g042905 Medicago truncatula HOM05D001219 ORTHO05D001017 2.0e-08 63.2 127 40.9
TPR.G26004 Trifolium pratense HOM05D001219 ORTHO05D001017 2.0e-08 63.2 123 36.6
TPR.G577 Trifolium pratense HOM05D001219 ORTHO05D001017 2.0e-08 63.2 149 36.2
C06p53900 Brassica napus HOM05D001219 ORTHO05D001017 2.6e-08 62.8 130 33.8
Medtr1g050478 Medicago truncatula HOM05D001219 ORTHO05D001017 2.6e-08 62.8 128 37.5
Medtr4g021835 Medicago truncatula HOM05D001219 ORTHO05D001017 2.6e-08 62.8 138 34.8
TPR.G29721 Trifolium pratense HOM05D001219 ORTHO05D001017 2.6e-08 62.8 129 36.4
arahy.Tifrunner.gnm1.ann1.2F3432 Arachis hypogaea HOM05D001219 ORTHO05D001017 3.4e-08 62.4 134 32.8
Medtr4g008340 Medicago truncatula HOM05D001219 ORTHO05D001017 3.4e-08 62.4 129 36.4
Medtr4g010410 Medicago truncatula HOM05D001219 ORTHO05D001017 3.4e-08 62.4 138 33.3
Medtr6g016720 Medicago truncatula HOM05D001219 ORTHO05D001017 3.4e-08 62.4 115 44.3
Medtr6g016910 Medicago truncatula HOM05D001219 ORTHO05D001017 3.4e-08 62.4 128 39.8
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-08 62.4 130 36.9
TPR.G19224 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-08 62.4 129 37.2
Lalb_Chr25g0279061 Lupinus albus HOM05D001219 ORTHO05D001017 4.5e-08 62.0 130 36.9
Medtr8g060730 Medicago truncatula HOM05D001219 ORTHO05D001017 4.5e-08 62.0 112 42.0
arahy.Tifrunner.gnm1.ann1.158PZX Arachis hypogaea HOM05D001219 ORTHO05D001017 5.8e-08 61.6 133 33.1
arahy.Tifrunner.gnm1.ann1.2MWS0I Arachis hypogaea HOM05D001219 ORTHO05D001017 5.8e-08 61.6 133 33.1
arahy.Tifrunner.gnm1.ann1.8PP8TY Arachis hypogaea HOM05D001219 ORTHO05D001017 5.8e-08 61.6 133 33.1
arahy.Tifrunner.gnm1.ann1.QYVZ3N Arachis hypogaea HOM05D001219 ORTHO05D001017 5.8e-08 61.6 133 33.1
Medtr4g006210 Medicago truncatula HOM05D001219 ORTHO05D001017 5.8e-08 61.6 106 41.5
TPR.G8606 Trifolium pratense HOM05D001219 ORTHO05D001017 5.8e-08 61.6 143 36.4
Hma1.2p1_0135F.1_g061780 Hydrangea macrophylla HOM05D001219 ORTHO05D001017 7.6e-08 61.2 130 35.4
Psat7g258640 Pisum sativum HOM05D001219 ORTHO05D001017 7.6e-08 61.2 147 32.7
TPR.G9692 Trifolium pratense HOM05D001219 ORTHO05D001017 7.6e-08 61.2 145 37.2
Medtr4g010710 Medicago truncatula HOM05D001219 ORTHO05D001017 9.9e-08 60.8 129 34.1
Medtr6g054950 Medicago truncatula HOM05D001219 ORTHO05D001017 9.9e-08 60.8 130 38.5
VMungo0331G0565 Vigna mungo HOM05D001219 ORTHO05D001017 9.9e-08 60.8 127 35.4
Glyma.07G026200 Glycine max HOM05D001219 ORTHO05D001017 1.3e-07 60.5 127 35.4
Medtr1g042340 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-07 60.5 85 47.1
TPR.G23034 Trifolium pratense HOM05D001219 ORTHO05D001017 1.3e-07 60.5 97 44.3
TPR.G9688 Trifolium pratense HOM05D001219 ORTHO05D001017 1.3e-07 60.5 149 36.2
TPR.G35158 Trifolium pratense HOM05D001219 ORTHO05D001017 1.7e-07 60.1 130 38.5
Medtr4g008400 Medicago truncatula HOM05D001219 ORTHO05D001017 2.2e-07 59.7 129 35.7
Medtr4g010615 Medicago truncatula HOM05D001219 ORTHO05D001017 2.2e-07 59.7 130 34.6
Potri.003G179100 Populus trichocarpa HOM05D001219 ORTHO05D001017 2.2e-07 59.7 132 34.8
Cpa.g.sc10.120 Carica papaya HOM05D001219 ORTHO05D001017 2.9e-07 59.3 128 29.7
Medtr4g010970 Medicago truncatula HOM05D001219 ORTHO05D001017 2.9e-07 59.3 128 35.9
Medtr4g035290 Medicago truncatula HOM05D001219 ORTHO05D001017 2.9e-07 59.3 130 36.9
Medtr8g045150 Medicago truncatula HOM05D001219 ORTHO05D001017 3.8e-07 58.9 105 39.0
Psat7g258680 Pisum sativum HOM05D001219 ORTHO05D001017 3.8e-07 58.9 127 33.1
TPR.G9658 Trifolium pratense HOM05D001219 ORTHO05D001017 3.8e-07 58.9 128 39.1
A07p45070 Brassica napus HOM05D001219 ORTHO05D001017 4.9e-07 58.5 130 32.3
BolC6t40404H Brassica oleracea HOM05D001219 ORTHO05D001017 6.4e-07 58.2 135 31.9
Cfa001905 Carpinus fangiana HOM05D001219 ORTHO05D001017 6.4e-07 58.2 125 36.0
TPR.G15707 Trifolium pratense HOM05D001219 ORTHO05D001017 6.4e-07 58.2 147 32.0
TPR.G8802 Trifolium pratense HOM05D001219 ORTHO05D001017 8.4e-07 57.8 152 36.8
TPR.G9690 Trifolium pratense HOM05D001219 ORTHO05D001017 8.4e-07 57.8 142 35.2
Medtr5g046730 Medicago truncatula HOM05D001219 ORTHO05D001017 1.1e-06 57.4 147 35.4
TPR.G26304 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-06 57.4 138 35.5
TPR.G29727 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-06 57.4 138 33.3
TPR.G9673 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-06 57.4 139 35.3
ClCG09G003210 Citrullus lanatus HOM05D001219 ORTHO05D001017 1.4e-06 57.0 131 32.1
Medtr1g028400 Medicago truncatula HOM05D001219 ORTHO05D001017 1.4e-06 57.0 149 32.9
Medtr3g110740 Medicago truncatula HOM05D001219 ORTHO05D001017 1.9e-06 56.6 134 34.3
Medtr7g044870 Medicago truncatula HOM05D001219 ORTHO05D001017 1.9e-06 56.6 84 51.2
Medtr3g110148 Medicago truncatula HOM05D001219 ORTHO05D001017 2.4e-06 56.2 129 34.1
Psat7g255480 Pisum sativum HOM05D001219 ORTHO05D001017 2.4e-06 56.2 128 35.2
BraA07t32010Z Brassica rapa HOM05D001219 ORTHO05D001017 4.2e-06 55.5 107 34.6
Ca_20557_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 4.2e-06 55.5 134 35.8
Medtr4g010580 Medicago truncatula HOM05D001219 ORTHO05D001017 4.2e-06 55.5 103 43.7
CiPaw.01G252300 Carya illinoinensis HOM05D001219 ORTHO05D001017 5.5e-06 55.1 136 32.4
Gohir.D05G122100 Gossypium hirsutum HOM05D001219 ORTHO05D001017 5.5e-06 55.1 125 34.4
Lalb_Chr25g0279201 Lupinus albus HOM05D001219 ORTHO05D001017 5.5e-06 55.1 127 33.9
Medtr4g010880 Medicago truncatula HOM05D001219 ORTHO05D001017 5.5e-06 55.1 155 36.1
Medtr6g027420 Medicago truncatula HOM05D001219 ORTHO05D001017 5.5e-06 55.1 146 35.6
TPR.G38610 Trifolium pratense HOM05D001219 ORTHO05D001017 5.5e-06 55.1 95 42.1
Ca_06859_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 7.1e-06 54.7 111 38.7
Eucgr.E01286 Eucalyptus grandis HOM05D001219 ORTHO05D001017 7.1e-06 54.7 98 39.8
Glyma.08G216300 Glycine max HOM05D001219 ORTHO05D001017 7.1e-06 54.7 127 33.9
Medtr4g008450 Medicago truncatula HOM05D001219 ORTHO05D001017 7.1e-06 54.7 117 38.5
Medtr5g088250 Medicago truncatula HOM05D001219 ORTHO05D001017 7.1e-06 54.7 103 37.9
Rhsim01G0031500 Rhododendron simsii HOM05D001219 ORTHO05D001017 7.1e-06 54.7 111 36.0
TPR.G7594 Trifolium pratense HOM05D001219 ORTHO05D001017 7.1e-06 54.7 139 34.5
arahy.Tifrunner.gnm1.ann1.GPF1Q4 Arachis hypogaea HOM05D001219 ORTHO05D001017 9.3e-06 54.3 101 39.6
Medtr3g083280 Medicago truncatula HOM05D001219 ORTHO05D001017 9.3e-06 54.3 98 41.8


User provided reference genes

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