Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.2e-255 885.9 421 100.0
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 8.5e-206 720.3 451 78.7
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 1.5e-194 682.9 431 77.7
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 1.9e-189 666.0 439 74.3
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 9.2e-184 647.1 412 76.0
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 8.9e-179 630.6 436 71.8
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 6.2e-172 607.8 374 79.4
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 4.6e-167 591.7 420 70.7
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 2.9e-161 572.4 393 68.2
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 6.4e-161 571.2 426 66.9
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 5.4e-160 568.2 393 66.7
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 1.6e-159 566.6 419 64.9
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 8.6e-158 560.8 409 64.3
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.1e-157 560.5 409 64.3
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 3.3e-157 558.9 414 64.0
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 5.6e-157 558.1 409 64.1
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 2.8e-156 555.8 402 64.9
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 2.8e-156 555.8 416 63.7
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 4.7e-156 555.1 404 65.8
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 8.1e-156 554.3 433 61.4
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 1.1e-155 553.9 393 65.9
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 1.1e-155 553.9 409 64.5
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 5.2e-155 551.6 436 61.9
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 7.6e-154 547.7 391 65.7
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 1.3e-153 547.0 420 62.6
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 2.2e-153 546.2 410 63.4
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 2.2e-153 546.2 418 62.4
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 2.2e-153 546.2 407 63.1
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 6.4e-153 544.7 423 61.5
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 3.2e-152 542.3 395 64.3
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 4.2e-152 542.0 390 65.6
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 7.1e-152 541.2 397 64.7
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 2.7e-151 539.3 445 58.0
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 6.0e-151 538.1 402 66.4
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 6.0e-151 538.1 427 61.4
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.0e-150 537.3 390 65.1
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 5.1e-150 535.0 409 61.4
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 9.6e-149 530.8 428 57.9
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 2.8e-148 529.3 401 61.3
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 8.1e-148 527.7 421 60.8
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 1.4e-147 526.9 401 61.3
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 9.0e-147 524.2 415 61.0
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 1.2e-146 523.9 408 61.3
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 1.5e-146 523.5 407 61.4
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 1.5e-146 523.5 407 61.4
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 2.6e-146 522.7 409 61.9
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 3.8e-145 518.8 413 60.0
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 4.9e-145 518.5 404 61.4
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 1.1e-144 517.3 402 61.2
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 1.6e-143 513.5 407 59.5
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.0e-142 510.8 414 60.1
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 1.0e-142 510.8 298 82.6
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 3.9e-142 508.8 427 57.6
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 5.1e-142 508.4 417 59.7
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 1.1e-141 507.3 401 60.8
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 1.9e-141 506.5 410 57.3
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 5.6e-141 505.0 407 60.9
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 2.1e-140 503.1 411 58.9
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 3.7e-140 502.3 407 59.5
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 6.2e-140 501.5 412 58.5
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 1.4e-139 500.4 422 56.6
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 1.4e-139 500.4 407 59.2
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.2e-138 497.3 401 59.1
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 7.6e-138 494.6 407 57.5
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 7.6e-138 494.6 407 57.7
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 7.6e-138 494.6 427 55.3
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 9.9e-138 494.2 405 57.8
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 1.7e-137 493.4 406 56.9
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 2.2e-137 493.0 407 57.5
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 3.2e-136 489.2 370 61.9
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 4.2e-136 488.8 410 56.3
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 7.1e-136 488.0 401 57.4
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 1.2e-135 487.3 413 57.9
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 3.5e-135 485.7 407 57.2
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 5.1e-134 481.9 426 54.5
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 1.9e-133 479.9 405 56.8
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 2.5e-133 479.6 407 56.3
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 2.5e-133 479.6 405 57.8
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 4.8e-132 475.3 407 60.0
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 6.2e-132 474.9 394 57.9
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 4.9e-129 465.3 408 54.2
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 8.7e-126 454.5 394 54.8
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 7.4e-125 451.4 398 54.0
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 1.2e-122 444.1 399 50.9
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 1.8e-118 430.3 401 53.4
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 1.7e-116 423.7 419 49.9
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 2.2e-116 423.3 355 57.2
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 3.7e-116 422.5 390 52.3
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 1.0e-113 414.5 399 49.1
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 6.5e-113 411.8 299 63.2
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 4.4e-109 399.1 288 64.9
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 5.7e-109 398.7 354 54.5
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 1.1e-107 394.4 378 50.8
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 2.5e-104 383.3 366 50.8
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 4.7e-103 379.0 298 60.7
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 1.6e-95 354.0 413 43.8
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 9.1e-83 311.6 397 42.6
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 4.3e-56 223.0 301 38.9
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 5.8e-53 212.6 275 41.5
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 2.1e-50 204.1 392 34.7
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 1.9e-48 197.6 122 71.3
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 3.0e-41 173.7 508 27.0
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 8.1e-39 165.6 200 43.5
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 8.4e-36 155.6 102 70.6
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 2.9e-28 130.6 496 25.4
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 1.9e-27 127.9 102 65.7
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 6.7e-17 92.8 253 27.7
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 6.9e-14 82.8 84 52.4
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 3.4e-13 80.5 84 47.6
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 7.1e-11 72.8 44 70.5


User provided reference genes

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