Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g037320 Medicago truncatula HOM05D009822 ORTHO05D011160 1.3e-75 286.2 130 100.0
Medtr2g037255 Medicago truncatula HOM05D009822 ORTHO05D011160 8.3e-59 230.3 128 78.1
Medtr2g037400 Medicago truncatula HOM05D009822 ORTHO05D011160 5.4e-58 227.6 128 77.3
Medtr2g037380 Medicago truncatula HOM05D009822 ORTHO05D011160 8.3e-51 203.8 128 68.8
Medtr2g037330 Medicago truncatula HOM05D009822 ORTHO05D011160 3.5e-49 198.4 130 67.7
Medtr2g037345 Medicago truncatula HOM05D009822 ORTHO05D011160 3.9e-48 194.9 128 68.0
Medtr2g037370 Medicago truncatula HOM05D009822 ORTHO05D011160 3.3e-39 165.2 130 60.0
TPR.G30277 Trifolium pratense HOM05D009822 ORTHO05D011160 1.6e-38 162.9 124 56.5
Medtr2g037200 Medicago truncatula HOM05D009822 ORTHO05D011160 2.5e-31 139.0 128 49.2
Psat1g144880 Pisum sativum HOM05D009822 ORTHO05D011160 1.8e-29 132.9 128 48.4
Psat1g145080 Pisum sativum HOM05D009822 ORTHO05D011160 4.4e-28 128.3 128 42.2
Medtr2g037250 Medicago truncatula HOM05D009822 ORTHO05D011160 1.4e-26 123.2 110 44.5
Psat0s3712g0120 Pisum sativum HOM05D009822 ORTHO05D011160 1.9e-26 122.9 131 43.5
Medtr2g037300 Medicago truncatula HOM05D009822 ORTHO05D011160 7.8e-25 117.5 128 45.3
Medtr2g037565 Medicago truncatula HOM05D009822 ORTHO05D011160 1.8e-21 106.3 133 42.9
Medtr2g037525 Medicago truncatula HOM05D009822 ORTHO05D011160 1.5e-20 103.2 131 38.9
TPR.G29607 Trifolium pratense HOM05D009822 ORTHO05D011160 8.7e-16 87.4 87 50.6
Medtr2g037445 Medicago truncatula HOM05D009822 ORTHO05D011160 2.4e-13 79.3 132 32.6
Medtr2g041360 Medicago truncatula HOM05D009822 ORTHO05D011160 1.2e-12 77.0 131 37.4
Psat1g145040 Pisum sativum HOM05D009822 ORTHO05D011160 2.0e-12 76.3 92 39.1
TPR.G36444 Trifolium pratense HOM05D013240 ORTHO05D011160 7.6e-12 74.3 130 33.1
Medtr2g037500 Medicago truncatula HOM05D009822 ORTHO05D011160 2.2e-11 72.8 88 35.2
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 1.4e-10 70.1 128 33.6
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 3.2e-10 68.9 129 34.1
Medtr2g037505 Medicago truncatula HOM05D009822 ORTHO05D011160 1.6e-09 66.6 113 36.3
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.6e-09 66.6 130 33.8
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 3.5e-09 65.5 121 33.1
Gohir.A08G018400 Gossypium hirsutum HOM05D009688 ORTHO05D005549 4.6e-09 65.1 132 32.6
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 7.8e-09 64.3 132 34.1
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 7.8e-09 64.3 132 34.1
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 8.7e-08 60.8 102 32.4
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 1.5e-07 60.1 114 29.8
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 1.9e-07 59.7 114 29.8
CsaV3_2G008640 Cucumis sativus L. HOM05D006945 ORTHO05D005549 2.5e-07 59.3 137 27.7
Gohir.A08G018300 Gossypium hirsutum HOM05D009688 ORTHO05D005549 2.5e-07 59.3 118 29.7
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.3e-07 57.8 127 30.7
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.3e-06 57.0 63 41.3
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 1.3e-06 57.0 130 28.5
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.6e-06 55.5 136 26.5
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 4.8e-06 55.1 127 28.3
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 6.2e-06 54.7 130 29.2
Medtr2g037190 Medicago truncatula HOM05D018581 ORTHO05D005549 6.2e-06 54.7 133 30.8
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 8.1e-06 54.3 132 29.5


User provided reference genes

Program Settings