Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g016610 Medicago truncatula HOM05D000096 ORTHO05D000045 3.0e-27 124.4 61 100.0
TPR.G1802 Trifolium pratense HOM05D000096 ORTHO05D000045 7.2e-13 76.6 68 60.3
TPR.G15922 Trifolium pratense HOM05D000096 ORTHO05D000045 5.7e-10 67.0 68 57.4
TPR.G21913 Trifolium pratense HOM05D000096 ORTHO05D000045 9.7e-10 66.2 68 52.9
TPR.G20281 Trifolium pratense HOM05D000096 ORTHO05D000045 2.2e-09 65.1 68 51.5
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 2.2e-09 65.1 72 54.2
Glyma.04G116000 Glycine max HOM05D000096 ORTHO05D000045 3.7e-09 64.3 68 51.5
TPR.G20752 Trifolium pratense HOM05D000096 ORTHO05D000045 3.7e-09 64.3 66 53.0
TWI09G0899 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 3.7e-09 64.3 69 53.6
TPR.G20355 Trifolium pratense HOM05D000096 ORTHO05D000045 4.8e-09 63.9 68 52.9
Glyma.19G051300 Glycine max HOM05D000096 ORTHO05D000045 6.3e-09 63.5 69 53.6
TPR.G13258 Trifolium pratense HOM05D000096 ORTHO05D000045 6.3e-09 63.5 72 52.8
TPR.G8078 Trifolium pratense HOM05D000096 ORTHO05D000045 1.8e-08 62.0 72 52.8
Glyma.16G109000 Glycine max HOM05D000096 ORTHO05D000045 2.4e-08 61.6 69 47.8
C07p00750 Brassica napus HOM05D000096 ORTHO05D000045 4.1e-08 60.8 76 48.7
CARHR218770 Cardamine hirsuta HOM05D000096 ORTHO05D000045 4.1e-08 60.8 68 48.5
CARHR258310 Cardamine hirsuta HOM05D000096 ORTHO05D000045 4.1e-08 60.8 68 50.0
C09p46800 Brassica napus HOM05D000096 ORTHO05D000045 5.3e-08 60.5 68 51.5
ECA233G1381 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.9e-08 60.1 68 51.5
ECA238G1995 Erigeron canadensis HOM05D000001 ORTHO05D011365 9.1e-08 59.7 63 55.6
C03p65010 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-07 59.3 68 48.5
CARHR217850 Cardamine hirsuta HOM05D000096 ORTHO05D000045 1.2e-07 59.3 68 48.5
Glyma.01G135100 Glycine max HOM05D000096 ORTHO05D000045 1.2e-07 59.3 68 48.5
Glyma.12G111300 Glycine max HOM05D000096 ORTHO05D000045 1.2e-07 59.3 68 48.5
TPR.G14299 Trifolium pratense HOM05D000096 ORTHO05D000045 1.2e-07 59.3 68 50.0
TPR.G9561 Trifolium pratense HOM05D000096 ORTHO05D000045 1.2e-07 59.3 66 48.5
Glyma.09G080200 Glycine max HOM05D000096 ORTHO05D000045 1.5e-07 58.9 63 50.8
TPR.G6063 Trifolium pratense HOM05D000096 ORTHO05D000065 2.0e-07 58.5 76 47.4
A05p20940 Brassica napus HOM05D000096 ORTHO05D000045 2.6e-07 58.2 68 51.5
ECA248G1849 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-07 58.2 63 52.4
Glyma.07G171700 Glycine max HOM05D000096 ORTHO05D000045 2.6e-07 58.2 68 47.1
C09p36920 Brassica napus HOM05D000096 ORTHO05D000174 3.4e-07 57.8 76 47.4
BolC9t56522H Brassica oleracea HOM05D000096 ORTHO05D000174 3.4e-07 57.8 76 47.4
CARHR257810 Cardamine hirsuta HOM05D000096 ORTHO05D000045 3.4e-07 57.8 69 47.8
ECA246G2519 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.4e-07 57.8 63 52.4
Medtr3g032450 Medicago truncatula HOM05D000096 ORTHO05D000045 3.4e-07 57.8 51 54.9
C05p33360 Brassica napus HOM05D000096 ORTHO05D000045 4.5e-07 57.4 68 48.5
ECA238G3552 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.5e-07 57.4 68 51.5
Lj2g0014783 Lotus japonicus HOM05D000096 ORTHO05D000045 4.5e-07 57.4 68 44.1
TPR.G15075 Trifolium pratense HOM05D000096 ORTHO05D000045 4.5e-07 57.4 68 48.5
TPR.G32047 Trifolium pratense HOM05D000096 ORTHO05D000045 4.5e-07 57.4 68 48.5
A05p27530 Brassica napus HOM05D000096 ORTHO05D000045 5.9e-07 57.0 68 50.0
HanXRQChr03g0061461 Helianthus annuus HOM05D000096 ORTHO05D000045 5.9e-07 57.0 68 47.1
BolC2t10350H Brassica oleracea HOM05D000096 ORTHO05D000045 7.7e-07 56.6 68 48.5
ECA240G1019 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.7e-07 56.6 63 52.4
BolC4t25353H Brassica oleracea HOM05D000096 ORTHO05D000045 1.0e-06 56.2 68 50.0
CARHR034850 Cardamine hirsuta HOM05D000096 ORTHO05D000045 1.0e-06 56.2 69 46.4
ECA240G2989 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.0e-06 56.2 68 51.5
BolC2t08343H Brassica oleracea HOM05D000096 ORTHO05D000045 1.3e-06 55.8 68 50.0
CARHR031010 Cardamine hirsuta HOM05D000096 ORTHO05D005277 1.3e-06 55.8 69 46.4
AUR62035400 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.3e-06 55.8 71 45.1
Glyma.09G061100 Glycine max HOM05D000096 ORTHO05D000045 1.3e-06 55.8 62 48.4
Lj4g0022780 Lotus japonicus HOM05D000096 ORTHO05D000045 1.3e-06 55.8 68 44.1
CARHR103530 Cardamine hirsuta HOM05D000096 ORTHO05D000045 1.7e-06 55.5 68 47.1
CARHR214330 Cardamine hirsuta HOM05D000096 ORTHO05D000045 1.7e-06 55.5 68 47.1
Lj1g0018201 Lotus japonicus HOM05D000096 ORTHO05D000045 1.7e-06 55.5 68 48.5
Medtr1g094770 Medicago truncatula HOM05D000096 ORTHO05D000045 1.7e-06 55.5 54 48.1
TPR.G22137 Trifolium pratense HOM05D000096 ORTHO05D000045 1.7e-06 55.5 68 48.5
C07p14850 Brassica napus HOM05D000096 ORTHO05D000045 2.2e-06 55.1 68 48.5
CARHR117390 Cardamine hirsuta HOM05D000096 ORTHO05D005277 2.2e-06 55.1 68 45.6
CARHR286450 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.2e-06 55.1 68 48.5
ECA233G3626 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-06 55.1 69 47.8
ECA234G4814 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-06 55.1 69 47.8
ECA236G4996 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-06 55.1 68 50.0
Oeu036482.1 Olea europaea HOM05D000096 ORTHO05D000045 2.2e-06 55.1 65 47.7
C05p53240 Brassica napus HOM05D000096 ORTHO05D005277 2.9e-06 54.7 68 45.6
CARHR035440 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.9e-06 54.7 68 45.6
CARHR178960 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.9e-06 54.7 68 48.5
ECA233G2825 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.9e-06 54.7 68 45.6
ECA233G3334 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.9e-06 54.7 69 43.5
ECA238G2772 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.9e-06 54.7 63 50.8
Lj4g0020000 Lotus japonicus HOM05D000096 ORTHO05D000045 2.9e-06 54.7 68 45.6
TPR.G7855 Trifolium pratense HOM05D000096 ORTHO05D000045 2.9e-06 54.7 68 47.1
C03p86030 Brassica napus HOM05D000096 ORTHO05D000045 3.8e-06 54.3 68 47.1
BolC3t20895H Brassica oleracea HOM05D000096 ORTHO05D000045 3.8e-06 54.3 68 47.1
COL.COLO4_36300 Corchorus olitorius HOM05D000096 ORTHO05D000045 3.8e-06 54.3 65 44.6
ECA232G1482 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.8e-06 54.3 69 46.4
ECA236G3020 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.8e-06 54.3 69 44.9
Lj3g0000363 Lotus japonicus HOM05D000096 ORTHO05D000045 3.8e-06 54.3 68 47.1
TPR.G21151 Trifolium pratense HOM05D000096 ORTHO05D000045 3.8e-06 54.3 68 42.6
TPR.G8666 Trifolium pratense HOM05D000096 ORTHO05D000045 3.8e-06 54.3 68 45.6
C01p48130 Brassica napus HOM05D000096 ORTHO05D000045 5.0e-06 53.9 68 47.1
BolC8t46902H Brassica oleracea HOM05D000096 ORTHO05D000045 5.0e-06 53.9 68 47.1
Glyma.07G160600 Glycine max HOM05D000096 ORTHO05D000045 5.0e-06 53.9 59 47.5
Aqoxy2G01285 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 6.5e-06 53.5 68 44.1
Aqoxy2G01909 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 6.5e-06 53.5 68 44.1
C01p17350 Brassica napus HOM05D000096 ORTHO05D000045 6.5e-06 53.5 68 47.1
CARHR038360 Cardamine hirsuta HOM05D000096 ORTHO05D000045 6.5e-06 53.5 69 46.4
CARHR259120 Cardamine hirsuta HOM05D000096 ORTHO05D000045 6.5e-06 53.5 69 46.4
COL.COLO4_34002 Corchorus olitorius HOM05D000096 ORTHO05D000045 6.5e-06 53.5 66 45.5
Glyma.13G024401 Glycine max HOM05D000096 ORTHO05D000045 6.5e-06 53.5 69 44.9
TPR.G26688 Trifolium pratense HOM05D000096 ORTHO05D000045 6.5e-06 53.5 68 42.6
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 6.5e-06 53.5 68 47.1
C06p16690 Brassica napus HOM05D000096 ORTHO05D000045 8.5e-06 53.1 69 42.0
ECA238G0298 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 45.6
Lj1g0008627 Lotus japonicus HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 41.2
Lj3g0024542 Lotus japonicus HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 45.6
LjContig00094g0010721 Lotus japonicus HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 45.6
LjContig00096g0004252 Lotus japonicus HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 45.6
PSO063G4053 Papaver somniferum HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 45.6
TPR.G14820 Trifolium pratense HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 45.6
TPR.G34078 Trifolium pratense HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 47.1
TPR.G5743 Trifolium pratense HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 42.6
TPR.G90 Trifolium pratense HOM05D000096 ORTHO05D000045 8.5e-06 53.1 68 47.1


User provided reference genes

Program Settings