Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0014s0410 Medicago truncatula HOM05D009185 ORTHO05D010768 7.7e-77 290.4 149 100.0
Medtr7g034030 Medicago truncatula HOM05D009185 ORTHO05D010768 3.7e-63 245.0 149 85.2
Medtr7g095830 Medicago truncatula HOM05D009185 ORTHO05D010768 2.1e-37 159.5 156 57.1
Medtr5g057715 Medicago truncatula HOM05D009185 ORTHO05D010768 1.0e-36 157.1 156 56.4
Medtr8g095235 Medicago truncatula HOM05D009185 ORTHO05D010768 1.1e-35 153.7 146 58.2
Medtr6g471190 Medicago truncatula HOM05D009185 ORTHO05D010768 7.6e-32 141.0 221 42.5
Medtr1g071170 Medicago truncatula HOM05D009185 ORTHO05D010768 3.8e-31 138.7 131 61.8
Medtr0362s0010 Medicago truncatula HOM05D009185 ORTHO05D010768 1.4e-30 136.7 149 54.4
Medtr2g083745 Medicago truncatula HOM05D009185 ORTHO05D010768 5.1e-28 128.3 131 58.8
Medtr3g090200 Medicago truncatula HOM05D009185 ORTHO05D010768 1.5e-27 126.7 131 58.0
Medtr3g463110 Medicago truncatula HOM05D009185 ORTHO05D010768 2.5e-27 125.9 149 52.3
Medtr4g045717 Medicago truncatula HOM05D009185 ORTHO05D010768 4.3e-27 125.2 83 66.3
Medtr8g059190 Medicago truncatula HOM05D009185 ORTHO05D010768 9.6e-27 124.0 102 61.8
Medtr1g050415 Medicago truncatula HOM05D009185 ORTHO05D010768 1.8e-25 119.8 97 57.7
Medtr4g045943 Medicago truncatula HOM05D009185 ORTHO05D010768 1.8e-25 119.8 96 60.4
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 4.0e-25 118.6 126 53.2
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 6.9e-25 117.9 73 71.2
Medtr0001s0260 Medicago truncatula HOM05D009185 ORTHO05D010768 9.0e-25 117.5 96 58.3
Medtr0155s0050 Medicago truncatula HOM05D009185 ORTHO05D010768 3.4e-24 115.5 87 62.1
Medtr0157s0040 Medicago truncatula HOM05D009185 ORTHO05D010768 1.3e-23 113.6 65 75.4
Medtr0389s0020 Medicago truncatula HOM05D009185 ORTHO05D010768 1.1e-22 110.5 90 58.9
Medtr4g033680 Medicago truncatula HOM05D009185 ORTHO05D010768 1.1e-22 110.5 109 63.3
Medtr0002s0070 Medicago truncatula HOM05D009185 ORTHO05D010768 5.4e-22 108.2 94 61.7
Medtr0441s0020 Medicago truncatula HOM05D009185 ORTHO05D010768 4.6e-21 105.1 66 69.7
Medtr1g036650 Medicago truncatula HOM05D009185 ORTHO05D010768 4.6e-21 105.1 74 64.9
Medtr3g090210 Medicago truncatula HOM05D009185 ORTHO05D010768 4.6e-21 105.1 66 69.7
Medtr3g040760 Medicago truncatula HOM05D009185 ORTHO05D010768 2.3e-20 102.8 66 71.2
Medtr3g020105 Medicago truncatula HOM05D011496 ORTHO05D010768 9.6e-19 97.4 114 47.4
Medtr0005s0250 Medicago truncatula HOM05D009185 ORTHO05D010768 1.6e-18 96.7 56 76.8
Medtr5g057040 Medicago truncatula HOM05D011496 ORTHO05D000589 1.6e-18 96.7 114 47.4
Medtr0159s0060 Medicago truncatula HOM05D011496 ORTHO05D010768 2.0e-16 89.7 114 44.7
Medtr6g015335 Medicago truncatula HOM05D009185 ORTHO05D010768 2.6e-16 89.4 131 45.0
Medtr0015s0170 Medicago truncatula HOM05D009185 ORTHO05D010768 5.8e-16 88.2 127 43.3
Medtr0260s0010 Medicago truncatula HOM05D011496 ORTHO05D000301 4.9e-15 85.1 78 52.6
Medtr2g064025 Medicago truncatula HOM05D011496 ORTHO05D010768 4.2e-14 82.0 75 52.0
Medtr2g076103 Medicago truncatula HOM05D011496 ORTHO05D010768 1.2e-13 80.5 75 52.0
Medtr3g048545 Medicago truncatula HOM05D011496 ORTHO05D010768 4.6e-13 78.6 75 50.7
Medtr7g081462 Medicago truncatula HOM05D011496 ORTHO05D010768 4.6e-13 78.6 75 50.7
Medtr2g037220 Medicago truncatula HOM05D011496 ORTHO05D010768 3.0e-12 75.9 75 50.7
Medtr6g464470 Medicago truncatula HOM05D002881 ORTHO05D002983 5.1e-12 75.1 123 42.3
Medtr0600s0020 Medicago truncatula HOM05D008900 ORTHO05D010768 8.7e-12 74.3 46 73.9
TPR.G4327 Trifolium pratense HOM05D000047 ORTHO05D000589 1.5e-11 73.6 153 32.7
TPR.G20886 Trifolium pratense HOM05D009185 ORTHO05D010768 3.3e-11 72.4 139 33.1
TPR.G36275 Trifolium pratense HOM05D000047 ORTHO05D010768 1.6e-10 70.1 158 32.3
TPR.G18503 Trifolium pratense HOM05D009185 ORTHO05D010768 3.7e-10 68.9 89 37.1
Ca_01749_v3 Cicer arietinum L. HOM05D011496 ORTHO05D010768 4.8e-10 68.6 83 37.3
TPR.G22869 Trifolium pratense HOM05D056069 ORTHO05D010768 4.8e-10 68.6 132 32.6
TPR.G36848 Trifolium pratense HOM05D000047 ORTHO05D000589 6.2e-10 68.2 129 33.3
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 1.1e-09 67.4 77 33.8
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.4e-09 67.0 121 34.7
PGR031G3326 Punica granatum HOM05D000047 ORTHO05D000589 3.1e-09 65.9 112 36.6
TPR.G17648 Trifolium pratense HOM05D000047 ORTHO05D000589 4.0e-09 65.5 75 34.7
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 5.3e-09 65.1 72 38.9
Medtr7g010878 Medicago truncatula HOM05D011496 ORTHO05D010768 5.3e-09 65.1 61 50.8
MBI17_g23155_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004604 9.0e-09 64.3 72 36.1
TPR.G16375 Trifolium pratense HOM05D009185 ORTHO05D010768 1.5e-08 63.5 105 34.3
MBI18_g24630_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 2.0e-08 63.2 72 37.5
PGR083G2337 Punica granatum HOM05D000047 ORTHO05D007790 2.0e-08 63.2 100 34.0
TPR.G13572 Trifolium pratense HOM05D000047 ORTHO05D000589 2.0e-08 63.2 101 31.7
PGR042G1707 Punica granatum HOM05D000047 ORTHO05D000589 2.6e-08 62.8 100 34.0
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 2.6e-08 62.8 104 33.7
PGR142G3120 Punica granatum HOM05D000047 ORTHO05D000589 3.4e-08 62.4 98 33.7
TAR697G0001 Trochodendron aralioides HOM05D000047 ORTHO05D000589 3.4e-08 62.4 89 39.3
PGR044G0485 Punica granatum HOM05D000047 ORTHO05D000589 4.5e-08 62.0 99 36.4
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 4.5e-08 62.0 73 37.0
Medtr3g069345 Medicago truncatula HOM05D011496 ORTHO05D010768 5.8e-08 61.6 47 59.6
PGR044G1494 Punica granatum HOM05D000047 ORTHO05D000589 5.8e-08 61.6 108 35.2
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 7.6e-08 61.2 117 32.5
PGR083G2666 Punica granatum HOM05D000047 ORTHO05D000589 7.6e-08 61.2 100 35.0
PGR102G0468 Punica granatum HOM05D000047 ORTHO05D000589 7.6e-08 61.2 100 34.0
PGR142G1178 Punica granatum HOM05D000047 ORTHO05D000589 7.6e-08 61.2 99 36.4
Duzib268G0258 Durio zibethinus HOM05D000047 ORTHO05D000589 9.9e-08 60.8 99 34.3
PGR004G2751 Punica granatum HOM05D000047 ORTHO05D000589 1.3e-07 60.5 100 36.0
PGR031G1972 Punica granatum HOM05D000047 ORTHO05D000589 1.3e-07 60.5 99 36.4
PGR119G1948 Punica granatum HOM05D000047 ORTHO05D000589 1.3e-07 60.5 99 36.4
MBI05_g23627_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.7e-07 60.1 72 34.7
PGR031G2812 Punica granatum HOM05D000047 ORTHO05D007790 1.7e-07 60.1 99 35.4
PGR142G3646 Punica granatum HOM05D000047 ORTHO05D000589 1.7e-07 60.1 100 33.0
PGR044G2113 Punica granatum HOM05D000047 ORTHO05D000589 2.2e-07 59.7 99 35.4
VMungo0720G0831 Vigna mungo HOM05D000015 ORTHO05D048578 2.2e-07 59.7 115 33.9
PGR119G2436 Punica granatum HOM05D000047 ORTHO05D000044 2.9e-07 59.3 100 36.0
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.8e-07 58.9 109 31.2
PGR083G1327 Punica granatum HOM05D000047 ORTHO05D007790 3.8e-07 58.9 123 31.7
Sopen02g008640 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-07 58.9 113 34.5
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 6.4e-07 58.2 114 29.8
MBI17_g00994_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 1.1e-06 57.4 107 33.6
PGR119G1186 Punica granatum HOM05D000047 ORTHO05D000589 1.1e-06 57.4 100 35.0
Medtr0389s0010 Medicago truncatula HOM05D009185 ORTHO05D010768 1.4e-06 57.0 70 52.9
PGR119G0890 Punica granatum HOM05D000047 ORTHO05D000589 1.4e-06 57.0 99 34.3
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 1.9e-06 56.6 135 29.6
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 1.9e-06 56.6 135 29.6
Sopen05g022280 Solanum pennellii HOM05D000047 ORTHO05D000044 1.9e-06 56.6 113 33.6
CAN.G370.4 Capsicum annuum HOM05D000047 ORTHO05D000589 2.4e-06 56.2 99 34.3
Ca_02960_v3 Cicer arietinum L. HOM05D010731 ORTHO05D000589 2.4e-06 56.2 69 36.2
PGR004G0317 Punica granatum HOM05D000047 ORTHO05D007790 2.4e-06 56.2 99 34.3
PGR031G0507 Punica granatum HOM05D000047 ORTHO05D000589 2.4e-06 56.2 98 34.7
PGR031G3967 Punica granatum HOM05D000047 ORTHO05D000589 2.4e-06 56.2 100 34.0
PGR044G1493 Punica granatum HOM05D000047 ORTHO05D000589 2.4e-06 56.2 147 29.9
Sopen12g017930 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.2 113 33.6
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 2.4e-06 56.2 70 32.9
PGR102G2504 Punica granatum HOM05D000047 ORTHO05D000589 3.2e-06 55.8 98 31.6
PGR142G0734 Punica granatum HOM05D000047 ORTHO05D000589 3.2e-06 55.8 76 34.2
Sopen08g011490 Solanum pennellii HOM05D000047 ORTHO05D000044 3.2e-06 55.8 113 33.6
PGSC0003DMG400021839 Solanum tuberosum HOM05D009254 ORTHO05D014687 3.2e-06 55.8 172 28.5
TPR.G10789 Trifolium pratense HOM05D000047 ORTHO05D000589 3.2e-06 55.8 70 32.9
Sopen01g027730 Solanum pennellii HOM05D000047 ORTHO05D000044 4.2e-06 55.5 113 33.6
PGR031G1973 Punica granatum HOM05D000047 ORTHO05D000044 5.5e-06 55.1 108 34.3
PGR031G1989 Punica granatum HOM05D000047 ORTHO05D000589 5.5e-06 55.1 108 34.3
PGR044G2529 Punica granatum HOM05D000047 ORTHO05D000044 5.5e-06 55.1 108 34.3
PGR100G0012 Punica granatum HOM05D000047 ORTHO05D000044 5.5e-06 55.1 108 34.3
PGR102G1128 Punica granatum HOM05D000047 ORTHO05D000589 5.5e-06 55.1 108 34.3
PGR118G0003 Punica granatum HOM05D000047 ORTHO05D007790 5.5e-06 55.1 108 34.3
PGR142G2721 Punica granatum HOM05D000047 ORTHO05D000589 5.5e-06 55.1 108 34.3
MBI11_g15179_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 7.1e-06 54.7 59 40.7


User provided reference genes

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