Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0088s0074 Marchantia polymorpha HOM05D006040 ORTHO05D007134 0.0e+00 1193.3 607 100.0
Mapoly0044s0025 Marchantia polymorpha HOM05D006040 ORTHO05D007134 1.1e-105 388.3 562 41.8
Pp3c12_6120 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.9e-81 307.8 592 34.3
Pp3c13_14780 Physcomitrium patens HOM05D006040 ORTHO05D007134 4.7e-80 303.1 560 35.2
SEGI_40721 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 3.5e-75 287.0 553 33.5
Pp3c25_2290 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.7e-74 284.6 561 34.4
Pp3c20_10180 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.5e-73 281.6 521 34.9
Prupe.2G322500 Prunus persica HOM05D006040 ORTHO05D007134 1.0e-63 248.8 578 31.3
FvH4_7g32290 Fragaria vesca HOM05D006040 ORTHO05D007134 3.1e-63 247.3 548 31.4
FAN20G2114 Fragaria x ananassa HOM05D006040 ORTHO05D007134 5.2e-63 246.5 548 31.2
TWI13G0007 Tripterygium wilfordii HOM05D006040 ORTHO05D007134 5.2e-63 246.5 551 31.4
TWI74G0239 Tripterygium wilfordii HOM05D006040 ORTHO05D007134 5.2e-63 246.5 551 31.4
PGR042G3864 Punica granatum HOM05D006040 ORTHO05D007134 3.4e-62 243.8 555 31.7
Potri.012G004300 Populus trichocarpa HOM05D006040 ORTHO05D007134 3.7e-61 240.4 561 32.4
CsaV3_2G035690 Cucumis sativus L. HOM05D006040 ORTHO05D007134 6.4e-61 239.6 548 29.9
FAN06G3790 Fragaria x ananassa HOM05D006040 ORTHO05D007134 1.1e-60 238.8 546 31.1
Dinv29187 Davidia involucrata HOM05D006040 ORTHO05D007134 1.4e-60 238.4 557 30.9
Aqoxy3G00220 Aquilegia oxysepala HOM05D006040 ORTHO05D007134 1.9e-60 238.0 572 30.4
Sabra12G0000200 Salix brachista HOM05D006040 ORTHO05D007134 1.9e-60 238.0 564 31.9
Sed0006638 Sechium edule HOM05D006040 ORTHO05D007134 1.9e-60 238.0 550 30.7
Lalb_Chr10g0102951 Lupinus albus HOM05D006040 ORTHO05D007134 1.2e-59 235.3 548 31.0
TAR375G0263 Trochodendron aralioides HOM05D006040 ORTHO05D007134 2.0e-59 234.6 548 31.6
QL01p000066 Quercus lobata HOM05D006040 ORTHO05D007134 3.5e-59 233.8 548 31.0
ClCG02G007980 Citrullus lanatus HOM05D006040 ORTHO05D007134 6.0e-59 233.0 548 29.6
Cc02_g00560 Coffea canephora HOM05D006040 ORTHO05D007134 7.8e-59 232.6 573 29.8
Lj3C891T14 Lonicera japonica HOM05D006040 ORTHO05D007134 7.8e-59 232.6 579 30.6
MD07G1303900 Malus domestica HOM05D006040 ORTHO05D007134 1.0e-58 232.3 587 29.8
Medtr5g068730 Medicago truncatula HOM05D006040 ORTHO05D007134 1.3e-58 231.9 559 30.9
TPR.G27916 Trifolium pratense HOM05D006040 ORTHO05D007134 2.3e-58 231.1 548 31.2
Manes.05G196800 Manihot esculenta HOM05D006040 ORTHO05D007134 3.9e-58 230.3 568 31.0
HPP92_012812 Vanilla planifolia HOM05D006040 ORTHO05D007134 5.0e-58 229.9 550 29.1
RcHm_v2.0_Chr1g0383341 Rosa chinensis HOM05D006040 ORTHO05D007134 6.6e-58 229.6 549 29.9
CBR_g3746 Chara braunii HOM05D000019 ORTHO05D000002 8.6e-58 229.2 530 33.4
Hund21080 Selenicereus undatus HOM05D006040 ORTHO05D007134 8.6e-58 229.2 558 29.7
Atru.chr12.2497 Acer truncatum HOM05D006040 ORTHO05D007134 1.1e-57 228.8 548 30.7
Atru.chr12.2521 Acer truncatum HOM05D006040 ORTHO05D007134 1.1e-57 228.8 548 30.7
Cfa018660 Carpinus fangiana HOM05D006040 ORTHO05D007134 1.1e-57 228.8 547 31.6
arahy.Tifrunner.gnm1.ann1.QSB9JP Arachis hypogaea HOM05D006040 ORTHO05D007134 1.9e-57 228.0 553 29.7
MELO3C024776.2 Cucumis melo HOM05D006040 ORTHO05D007134 2.5e-57 227.6 548 28.8
Psat2g061600 Pisum sativum HOM05D006040 ORTHO05D007134 5.6e-57 226.5 554 30.5
FAN03G3503 Fragaria x ananassa HOM05D006040 ORTHO05D007134 9.5e-57 225.7 554 30.1
PSO063G2217 Papaver somniferum HOM05D006040 ORTHO05D007134 1.2e-56 225.3 570 29.8
arahy.Tifrunner.gnm1.ann1.53C9AK Arachis hypogaea HOM05D006040 ORTHO05D007134 2.1e-56 224.6 553 29.3
AUR62005943 Chenopodium quinoa HOM05D006040 ORTHO05D007134 3.6e-56 223.8 565 28.3
Rhsim09G0211300 Rhododendron simsii HOM05D006040 ORTHO05D007134 3.6e-56 223.8 540 30.4
ATR0579G018 Amborella trichopoda HOM05D006040 ORTHO05D007134 4.7e-56 223.4 553 30.0
VMungo0647G0797 Vigna mungo HOM05D006040 ORTHO05D007134 4.7e-56 223.4 557 30.0
Hma1.2p1_1235F.1_g269220 Hydrangea macrophylla HOM05D006040 ORTHO05D007134 1.1e-55 222.2 551 31.2
CBR_g29958 Chara braunii HOM05D006040 ORTHO05D007134 1.8e-55 221.5 589 30.1
FAN10G3876 Fragaria x ananassa HOM05D006040 ORTHO05D007134 1.8e-55 221.5 554 30.0
LjContig00155g0021870 Lotus japonicus HOM05D006040 ORTHO05D007134 1.8e-55 221.5 548 29.4
Ca_05537_v3 Cicer arietinum L. HOM05D006040 ORTHO05D007134 3.1e-55 220.7 548 29.9
Os02g0106700 Oryza sativa ssp. japonica HOM05D006040 ORTHO05D007134 3.1e-55 220.7 583 28.0
CANSAT21G0186 Cannabis sativa HOM05D006040 ORTHO05D007134 4.0e-55 220.3 549 31.0
FAN10G2970 Fragaria x ananassa HOM05D006040 ORTHO05D007134 4.0e-55 220.3 554 29.6
Lalb_Chr08g0239381 Lupinus albus HOM05D006040 ORTHO05D007134 4.0e-55 220.3 560 29.1
PSO017G1458 Papaver somniferum HOM05D006040 ORTHO05D007134 8.9e-55 219.2 559 29.2
Zm00001eb229510 Zea mays HOM05D006040 ORTHO05D007134 1.2e-54 218.8 552 28.8
Glyma.02G220600 Glycine max HOM05D006040 ORTHO05D007134 1.5e-54 218.4 590 29.2
Sc25g0001060 Simmondsia chinensis HOM05D006040 ORTHO05D007134 2.6e-54 217.6 551 28.3
SalBow2G1501 Salvia bowleyana HOM05D006040 ORTHO05D007134 4.4e-54 216.9 573 29.0
Cpa.g.sc3.191 Carica papaya HOM05D006040 ORTHO05D007134 7.5e-54 216.1 553 29.5
AUR62028121 Chenopodium quinoa HOM05D006040 ORTHO05D007134 7.5e-54 216.1 565 27.6
Actinidia18692 Actinidia chinensis HOM05D006040 ORTHO05D007134 3.7e-53 213.8 548 29.6
GSVIVG01038686001 Vitis vinifera HOM05D006040 ORTHO05D007134 4.9e-53 213.4 549 29.1
Lj1g0004094 Lotus japonicus HOM05D006040 ORTHO05D007134 8.3e-53 212.6 569 28.5
THA.LOC104798996 Tarenaya hassleriana HOM05D006040 ORTHO05D007134 1.1e-52 212.2 565 28.8
Zm00001eb209800 Zea mays HOM05D006040 ORTHO05D007134 1.9e-52 211.5 588 28.2
EL10Ac3g05126 Beta vulgaris HOM05D006040 ORTHO05D007134 2.4e-52 211.1 559 27.5
Glyma.06G139400 Glycine max HOM05D006040 ORTHO05D007134 3.2e-52 210.7 569 29.2
ECA238G4129 Erigeron canadensis HOM05D006040 ORTHO05D007134 1.2e-51 208.8 543 28.9
HanXRQChr14g0463001 Helianthus annuus HOM05D006040 ORTHO05D007134 1.2e-51 208.8 532 30.1
SGA_v2.0_scaffold59G20786 Striga asiatica HOM05D006040 ORTHO05D007134 1.2e-51 208.8 531 29.9
Solyc06g072970.3 Solanum lycopersicum HOM05D006040 ORTHO05D007134 1.6e-51 208.4 584 28.8
Ca_16841_v3 Cicer arietinum L. HOM05D006040 ORTHO05D007134 2.1e-51 208.0 548 28.5
MSTRG.18 Avicennia marina HOM05D006040 ORTHO05D007134 2.7e-51 207.6 569 29.3
Eucgr.A00979 Eucalyptus grandis HOM05D006040 ORTHO05D007134 2.7e-51 207.6 564 28.2
DCAR_010554 Daucus carota HOM05D006040 ORTHO05D007134 6.0e-51 206.5 584 28.4
Phvul.009G040600 Phaseolus vulgaris HOM05D006040 ORTHO05D007134 6.0e-51 206.5 542 29.5
PGSC0003DMG400026928 Solanum tuberosum HOM05D006040 ORTHO05D007134 6.0e-51 206.5 583 28.0
Thecc.03G212500 Theobroma cacao HOM05D006040 ORTHO05D007134 6.0e-51 206.5 584 29.1
TPR.G35913 Trifolium pratense HOM05D006040 ORTHO05D007134 7.8e-51 206.1 583 27.8
Gorai.004G126800 Gossypium raimondii HOM05D006040 ORTHO05D007134 1.3e-50 205.3 549 29.9
Lsat_1_v5_gn_8_36881 Lactuca sativa HOM05D006040 ORTHO05D007134 1.3e-50 205.3 530 30.8
Sopen06g029320 Solanum pennellii HOM05D006040 ORTHO05D007134 2.3e-50 204.5 551 28.7
Sp2g22720 Schrenkiella parvula HOM05D006040 ORTHO05D007134 3.0e-50 204.1 582 29.2
Nitab4.5_0000115g0200 Nicotiana tabacum HOM05D006040 ORTHO05D007134 3.9e-50 203.8 550 27.6
Migut.F00965 Erythranthe guttata HOM05D006040 ORTHO05D007134 6.6e-50 203.0 544 28.3
Peaxi162Scf00815g00228 Petunia axillaris HOM05D006040 ORTHO05D007134 2.5e-49 201.1 550 29.5
AL6G36290 Arabidopsis lyrata HOM05D006040 ORTHO05D007134 3.3e-49 200.7 542 30.3
Carub.0006s2254 Capsella rubella HOM05D006040 ORTHO05D007134 5.6e-49 199.9 566 29.2
Thhalv10004343m.g Eutrema salsugineum HOM05D006040 ORTHO05D007134 5.6e-49 199.9 565 28.8
unitig_578.g16670 Utricularia gibba HOM05D006040 ORTHO05D007134 5.6e-49 199.9 548 27.7
Medtr3g093420 Medicago truncatula HOM05D006040 ORTHO05D007134 2.1e-48 198.0 583 26.9
AT5G24680 Arabidopsis thaliana HOM05D006040 ORTHO05D007134 4.7e-48 196.8 549 29.9
Psat5g070440 Pisum sativum HOM05D006040 ORTHO05D007134 6.2e-48 196.4 548 27.4
BraA06t26478Z Brassica rapa HOM05D006040 ORTHO05D007134 3.1e-47 194.1 549 30.6
CAN.G65.140 Capsicum annuum HOM05D006040 ORTHO05D007134 4.0e-47 193.7 529 28.5
Nitab4.5_0003012g0150 Nicotiana tabacum HOM05D006040 ORTHO05D007134 1.5e-46 191.8 591 28.1
C07p43010 Brassica napus HOM05D006040 ORTHO05D007134 1.3e-45 188.7 546 29.9
BolC7t44830H Brassica oleracea HOM05D006040 ORTHO05D007134 1.3e-45 188.7 546 29.9
A06p35530 Brassica napus HOM05D006040 ORTHO05D007134 2.2e-45 188.0 567 29.5
CSS0020482 Camellia sinensis var. sinensis HOM05D006040 ORTHO05D007134 1.9e-44 184.9 577 26.5
Pp3c23_1100 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.6e-43 181.8 189 47.6
Haze_00002 Corylus avellana HOM05D006040 ORTHO05D007134 3.5e-43 180.6 162 54.3
Glyma.04G225400 Glycine max HOM05D006040 ORTHO05D007134 2.3e-42 177.9 212 46.2
vmacro10175 Vaccinium macrocarpon HOM05D006040 ORTHO05D007134 8.6e-42 176.0 174 50.6
Phvul.008G187700 Phaseolus vulgaris HOM05D006040 ORTHO05D007134 1.5e-41 175.3 168 50.0
COL.COLO4_14403 Corchorus olitorius HOM05D002417 ORTHO05D002589 5.6e-41 173.3 187 46.5
Duzib068G0842 Durio zibethinus HOM05D006040 ORTHO05D007134 2.8e-40 171.0 153 55.6
FvH4_7g33360 Fragaria vesca HOM05D006040 ORTHO05D007134 3.1e-39 167.5 479 29.4
Aa31LG11G3920 Aethionema arabicum HOM05D006040 ORTHO05D007134 6.8e-39 166.4 194 47.9
CARHR188790 Cardamine hirsuta HOM05D006040 ORTHO05D007134 6.8e-39 166.4 167 50.9
SEGI_39404 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 2.0e-38 164.9 153 54.2
MD01G1231800 Malus domestica HOM05D006040 ORTHO05D007134 8.4e-37 159.5 142 50.7
SEGI_00936 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 8.4e-37 159.5 152 53.3
BcaNung01250 Brassica carinata HOM05D006040 ORTHO05D007134 1.9e-36 158.3 150 54.7
FAN01G0445 Fragaria x ananassa HOM05D006040 ORTHO05D007134 8.7e-34 149.4 99 65.7
MBI12_g33183_MAGBIO Magnolia biondii HOM05D006040 ORTHO05D007134 1.8e-31 141.7 467 28.3
Gohir.A08G107000 Gossypium hirsutum HOM05D006040 ORTHO05D007134 3.8e-29 134.0 548 25.4
Glyma.14G187200 Glycine max HOM05D006040 ORTHO05D007134 6.0e-27 126.7 117 47.9
SEGI_38707 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 2.5e-25 121.3 153 43.8
Lalb_Chr14g0364691 Lupinus albus HOM05D006040 ORTHO05D007134 3.3e-25 120.9 127 47.2
VMungo1309G2872 Vigna mungo HOM05D006040 ORTHO05D007134 2.7e-19 101.3 120 45.8
Oeu063747.1 Olea europaea HOM05D006040 ORTHO05D007134 3.5e-19 100.9 95 49.5
SMO347G0626 Selaginella moellendorffii HOM05D006040 ORTHO05D007134 3.9e-18 97.4 63 71.4
Gohir.D08G118000 Gossypium hirsutum HOM05D006040 ORTHO05D007134 3.8e-13 80.9 82 47.6
MD01G1231900 Malus domestica HOM05D006040 ORTHO05D007134 8.4e-13 79.7 104 42.3
Cre05.g240500 Chlamydomonas reinhardtii HOM05D006040 ORTHO05D007134 1.4e-12 79.0 153 35.9
FvH4_7g33700 Fragaria vesca HOM05D006040 ORTHO05D007134 1.5e-09 68.9 49 63.3
Mapoly0039s0051 Marchantia polymorpha HOM05D003157 ORTHO05D004447 7.6e-06 56.6 59 40.7


User provided reference genes

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