Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 7.4e-312 1072.8 542 100.0
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 1.3e-113 414.5 455 49.7
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 4.2e-104 382.9 439 45.6
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 2.3e-102 377.1 453 45.3
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 1.3e-94 351.3 448 43.1
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 5.1e-94 349.4 448 44.0
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 8.7e-94 348.6 447 43.0
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.5e-93 347.1 449 43.2
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 3.3e-93 346.7 449 43.2
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 3.3e-93 346.7 421 44.2
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 4.3e-93 346.3 448 43.3
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 7.4e-93 345.5 449 43.2
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 9.6e-93 345.1 448 42.4
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 4.8e-92 342.8 449 43.0
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.1e-91 341.7 456 42.5
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.4e-91 341.3 454 41.2
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 1.4e-91 341.3 449 42.5
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 5.3e-91 339.3 455 42.6
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 6.9e-91 339.0 420 43.3
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 9.0e-91 338.6 448 41.5
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 9.0e-91 338.6 441 42.6
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 9.0e-91 338.6 449 42.1
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 9.0e-91 338.6 467 41.3
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.5e-90 337.8 455 41.5
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.0e-90 337.4 446 41.5
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 4.5e-90 336.3 421 43.7
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 5.8e-90 335.9 470 41.1
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.3e-89 334.7 448 40.8
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 2.2e-89 334.0 448 42.4
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 2.9e-89 333.6 448 42.0
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 4.9e-89 332.8 430 42.3
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 8.4e-89 332.0 443 41.8
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 1.1e-88 331.6 470 39.8
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.4e-88 331.3 450 41.1
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.4e-88 330.5 448 41.5
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 3.2e-88 330.1 464 40.5
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 3.2e-88 330.1 454 40.7
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 4.2e-88 329.7 454 40.5
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 5.5e-88 329.3 448 41.3
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 7.1e-88 328.9 447 40.7
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 9.3e-88 328.6 446 40.8
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 9.3e-88 328.6 417 42.0
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 2.1e-87 327.4 452 38.9
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.7e-87 327.0 443 39.7
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 4.6e-87 326.2 425 41.4
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 6.0e-87 325.9 443 41.1
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 7.9e-87 325.5 408 42.2
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 7.9e-87 325.5 445 41.6
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.0e-86 325.1 452 39.8
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.3e-86 324.7 446 41.3
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 2.3e-86 323.9 438 40.2
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 2.3e-86 323.9 417 41.0
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 3.0e-86 323.6 438 40.2
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 3.0e-86 323.6 433 42.7
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 5.1e-86 322.8 446 40.8
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 5.1e-86 322.8 446 41.0
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 6.7e-86 322.4 421 41.8
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 6.7e-86 322.4 458 40.8
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 6.7e-86 322.4 438 40.2
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 6.7e-86 322.4 435 40.0
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.1e-85 321.6 421 41.6
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.9e-85 320.9 444 40.1
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 1.9e-85 320.9 416 40.9
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 1.9e-85 320.9 437 39.6
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 2.5e-85 320.5 472 39.0
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 2.5e-85 320.5 471 38.4
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 3.3e-85 320.1 446 40.4
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 3.3e-85 320.1 416 40.4
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 4.3e-85 319.7 485 39.0
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 4.3e-85 319.7 474 38.8
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 4.3e-85 319.7 448 38.8
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 5.6e-85 319.3 436 40.6
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 5.6e-85 319.3 446 40.1
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 9.6e-85 318.5 421 41.1
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.6e-84 317.8 448 39.3
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.6e-84 317.8 452 39.6
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 2.1e-84 317.4 472 39.0
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 2.1e-84 317.4 452 39.8
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 2.1e-84 317.4 508 37.0
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 2.8e-84 317.0 417 41.2
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 2.8e-84 317.0 452 39.8
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 8.1e-84 315.5 452 39.2
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.4e-83 314.7 465 39.1
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 2.4e-83 313.9 428 39.5
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 5.3e-83 312.8 417 41.2
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 5.3e-83 312.8 447 38.3
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 9.0e-83 312.0 432 40.0
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 5.8e-82 309.3 435 40.5
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 3.8e-81 306.6 415 40.0
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 4.9e-81 306.2 404 41.3
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 1.4e-80 304.7 396 40.4
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 2.5e-80 303.9 385 41.3
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 4.2e-80 303.1 436 38.3
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 5.5e-80 302.8 416 38.9
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 1.6e-79 301.2 436 40.4
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 4.6e-79 299.7 445 38.4
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.8e-78 297.7 422 39.8
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 3.8e-73 280.0 420 39.3
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 8.5e-73 278.9 428 37.1
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.9e-69 267.7 397 37.5
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 7.7e-66 255.8 380 39.2
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.6e-61 240.7 380 36.6
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 2.2e-60 237.7 352 37.8
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 2.2e-60 237.7 334 38.6
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 2.1e-55 221.1 211 54.0
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.4e-51 207.6 281 39.9
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 4.7e-47 193.4 253 41.5
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 3.2e-40 170.6 208 45.2
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 4.8e-36 156.8 240 42.1
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 1.1e-35 155.6 132 54.5
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 1.9e-32 144.8 123 54.5
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 6.1e-31 139.8 267 31.5
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 5.6e-16 90.1 185 29.2
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 4.0e-14 84.0 124 37.9
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 4.4e-13 80.5 124 37.1
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 6.2e-07 60.1 87 35.6
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.8e-06 58.5 224 25.4
Glyma.18G039300 Glycine max HOM05D002007 ORTHO05D000355 4.0e-06 57.4 125 28.0
PSO170G6018 Papaver somniferum HOM05D007340 ORTHO05D008979 5.2e-06 57.0 117 27.4


User provided reference genes

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