Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0049s0016 Marchantia polymorpha HOM05D004658 ORTHO05D005927 2.2e-165 585.5 285 100.0
Mapoly0032s0164 Marchantia polymorpha HOM05D004658 ORTHO05D005927 1.3e-154 549.7 273 96.7
Pp3c6_17840 Physcomitrium patens HOM05D004658 ORTHO05D005927 2.3e-122 442.6 273 74.7
Pp3c25_7720 Physcomitrium patens HOM05D004658 ORTHO05D005927 1.4e-119 433.3 273 72.5
AagrBONN_evm.TU.Sc2ySwM_228.2732 Anthoceros agrestis HOM05D004658 ORTHO05D005927 2.9e-117 425.6 272 71.0
Mapoly1060s0001 Marchantia polymorpha HOM05D004658 ORTHO05D005927 3.8e-117 425.2 212 97.2
SMO365G0028 Selaginella moellendorffii HOM05D004658 ORTHO05D005927 1.5e-116 423.3 271 70.5
PSO210G5154 Papaver somniferum HOM05D004658 ORTHO05D005927 2.1e-115 419.5 272 72.1
Gorai.008G139300 Gossypium raimondii HOM05D004658 ORTHO05D005927 1.8e-114 416.4 274 70.4
Nn3g21693 Nelumbo nucifera HOM05D004658 ORTHO05D005927 1.8e-114 416.4 274 71.5
TAR362G0927 Trochodendron aralioides HOM05D004658 ORTHO05D005927 1.8e-114 416.4 274 71.2
CSS0014890 Camellia sinensis var. sinensis HOM05D004658 ORTHO05D005927 2.3e-114 416.0 274 71.2
Gohir.D12G128500 Gossypium hirsutum HOM05D004658 ORTHO05D005927 3.0e-114 415.6 274 70.4
Thecc.01G313700 Theobroma cacao HOM05D004658 ORTHO05D005927 3.0e-114 415.6 274 70.4
PSO761G0108 Papaver somniferum HOM05D004658 ORTHO05D005927 5.2e-114 414.8 272 71.7
THA.LOC104817457 Tarenaya hassleriana HOM05D004658 ORTHO05D005927 8.9e-114 414.1 274 70.4
Aqoxy2G02766 Aquilegia oxysepala HOM05D004658 ORTHO05D005927 2.0e-113 412.9 274 70.8
FAN04G3181 Fragaria x ananassa HOM05D004658 ORTHO05D005927 2.6e-113 412.5 274 70.4
Peaxi162Scf00691g00219 Petunia axillaris HOM05D004658 ORTHO05D005927 2.6e-113 412.5 274 70.8
GSVIVG01028121001 Vitis vinifera HOM05D004658 ORTHO05D005927 2.6e-113 412.5 274 70.8
MBI18_g17316_MAGBIO Magnolia biondii HOM05D004658 ORTHO05D005927 3.4e-113 412.1 277 70.8
Aa31LG1G28690 Aethionema arabicum HOM05D004658 ORTHO05D005927 4.4e-113 411.8 274 71.9
Actinidia17899 Actinidia chinensis HOM05D004658 ORTHO05D005927 5.7e-113 411.4 274 70.4
FvH4_5g39170 Fragaria vesca HOM05D004658 ORTHO05D005927 5.7e-113 411.4 274 70.4
FAN18G2042 Fragaria x ananassa HOM05D004658 ORTHO05D005927 5.7e-113 411.4 274 70.4
RcHm_v2.0_Chr7g0241431 Rosa chinensis HOM05D004658 ORTHO05D005927 5.7e-113 411.4 274 70.1
Cpa.g.sc18.45 Carica papaya HOM05D004658 ORTHO05D005927 9.8e-113 410.6 274 70.1
Eucgr.H01015 Eucalyptus grandis HOM05D004658 ORTHO05D005927 1.3e-112 410.2 274 70.8
Dinv10101 Davidia involucrata HOM05D004658 ORTHO05D005927 2.2e-112 409.5 274 70.4
Migut.D00082 Erythranthe guttata HOM05D004658 ORTHO05D005927 2.2e-112 409.5 274 70.8
Lj1g0019327 Lotus japonicus HOM05D004658 ORTHO05D005927 2.2e-112 409.5 274 68.6
CDE08G1239 Ceratophyllum demersum HOM05D004658 ORTHO05D005927 2.8e-112 409.1 275 69.8
TAR633G2306 Trochodendron aralioides HOM05D004658 ORTHO05D005927 4.9e-112 408.3 274 69.7
RcHm_v2.0_Chr7g0241201 Rosa chinensis HOM05D004658 ORTHO05D005927 6.3e-112 407.9 274 69.3
Solyc01g079450.3 Solanum lycopersicum HOM05D004658 ORTHO05D005927 6.3e-112 407.9 276 68.8
MSTRG.18101 Avicennia marina HOM05D004658 ORTHO05D005927 8.3e-112 407.5 274 70.8
Cfa005797 Carpinus fangiana HOM05D004658 ORTHO05D005927 8.3e-112 407.5 274 70.4
Thhalv10001294m.g Eutrema salsugineum HOM05D004658 ORTHO05D005927 8.3e-112 407.5 274 70.8
Gohir.A12G124600 Gossypium hirsutum HOM05D004658 ORTHO05D005927 8.3e-112 407.5 274 69.3
Manes.05G003600 Manihot esculenta HOM05D004658 ORTHO05D005927 8.3e-112 407.5 274 69.3
AT2G47390 Arabidopsis thaliana HOM05D004658 ORTHO05D005927 1.1e-111 407.1 274 70.8
Glyma.03G219500 Glycine max HOM05D004658 ORTHO05D005927 1.1e-111 407.1 275 69.1
Os03g0307100 Oryza sativa ssp. japonica HOM05D004658 ORTHO05D005927 1.1e-111 407.1 271 70.1
Sopen01g031220 Solanum pennellii HOM05D004658 ORTHO05D005927 1.1e-111 407.1 274 69.3
ATR0796G129 Amborella trichopoda HOM05D004658 ORTHO05D005927 1.4e-111 406.8 273 71.4
Lalb_Chr04g0259961 Lupinus albus HOM05D004658 ORTHO05D005927 1.4e-111 406.8 273 68.9
Potri.002G196000 Populus trichocarpa HOM05D004658 ORTHO05D005927 2.4e-111 406.0 274 70.1
Sp4g29330 Schrenkiella parvula HOM05D004658 ORTHO05D005927 2.4e-111 406.0 274 70.4
BcaB02g08775 Brassica carinata HOM05D004658 ORTHO05D005927 3.1e-111 405.6 274 70.4
BraA05t19050Z Brassica rapa HOM05D004658 ORTHO05D005927 4.1e-111 405.2 274 70.4
vmacro02405 Vaccinium macrocarpon HOM05D004658 ORTHO05D005927 4.1e-111 405.2 274 69.3
CiPaw.07G117600 Carya illinoinensis HOM05D004658 ORTHO05D005927 5.4e-111 404.8 274 69.0
FAN08G2138 Fragaria x ananassa HOM05D004658 ORTHO05D005927 5.4e-111 404.8 274 70.1
C04p00470 Brassica napus HOM05D004658 ORTHO05D005927 7.0e-111 404.4 274 69.7
Oeu008475.1 Olea europaea HOM05D004658 ORTHO05D005927 7.0e-111 404.4 274 69.3
TWI18G0165 Tripterygium wilfordii HOM05D004658 ORTHO05D005927 7.0e-111 404.4 274 69.7
A05p00520 Brassica napus HOM05D004658 ORTHO05D005927 1.2e-110 403.7 274 70.1
BcaC02g06972 Brassica carinata HOM05D004658 ORTHO05D005927 1.6e-110 403.3 274 70.1
Carub.0004s3011 Capsella rubella HOM05D004658 ORTHO05D005927 1.6e-110 403.3 273 70.3
CANSAT11G0445 Cannabis sativa HOM05D004658 ORTHO05D005927 2.0e-110 402.9 274 69.0
CARHR142780 Cardamine hirsuta HOM05D004658 ORTHO05D005927 2.7e-110 402.5 274 70.1
Sc17g0000440 Simmondsia chinensis HOM05D004658 ORTHO05D005927 2.7e-110 402.5 274 69.0
BcaC02g12575 Brassica carinata HOM05D004658 ORTHO05D005927 3.5e-110 402.1 274 69.3
DCAR_018298 Daucus carota HOM05D004658 ORTHO05D005927 3.5e-110 402.1 274 69.0
Duzib133G0239 Durio zibethinus HOM05D004658 ORTHO05D005927 3.5e-110 402.1 274 69.0
C04p72760 Brassica napus HOM05D004658 ORTHO05D005927 5.9e-110 401.4 274 69.7
Prupe.8G266800 Prunus persica HOM05D004658 ORTHO05D005927 5.9e-110 401.4 274 68.2
Potri.014G120600 Populus trichocarpa HOM05D004658 ORTHO05D005927 1.0e-109 400.6 274 68.6
MELO3C015923.2 Cucumis melo HOM05D004658 ORTHO05D005927 1.3e-109 400.2 275 69.1
Phvul.001G213000 Phaseolus vulgaris HOM05D004658 ORTHO05D005927 1.3e-109 400.2 273 67.8
VMungo1383G2746 Vigna mungo HOM05D004658 ORTHO05D005927 1.3e-109 400.2 274 67.9
Ca_09212_v3 Cicer arietinum L. HOM05D004658 ORTHO05D005927 2.3e-109 399.4 273 67.4
CsaV3_7G029970 Cucumis sativus L. HOM05D004658 ORTHO05D005927 2.3e-109 399.4 275 68.7
Ah.02g112260 Amaranthus hybridus HOM05D004658 ORTHO05D005927 2.9e-109 399.1 274 67.9
MD00G1179200 Malus domestica HOM05D004658 ORTHO05D005927 2.9e-109 399.1 273 68.9
TPR.G4133 Trifolium pratense HOM05D004658 ORTHO05D005927 2.9e-109 399.1 273 67.0
Glyma.19G216400 Glycine max HOM05D004658 ORTHO05D005927 3.8e-109 398.7 275 68.0
Lj2C1205T10 Lonicera japonica HOM05D004658 ORTHO05D005927 3.8e-109 398.7 292 66.4
Sed0028068 Sechium edule HOM05D004658 ORTHO05D005927 3.8e-109 398.7 273 67.8
Lalb_Chr15g0078141 Lupinus albus HOM05D004658 ORTHO05D005927 5.0e-109 398.3 273 67.4
ECA236G4246 Erigeron canadensis HOM05D004658 ORTHO05D005927 8.6e-109 397.5 273 67.0
MD03G1294700 Malus domestica HOM05D004658 ORTHO05D005927 8.6e-109 397.5 273 68.5
Mapoly0893s0002 Marchantia polymorpha HOM05D004658 ORTHO05D005927 8.6e-109 397.5 201 96.5
HanXRQChr06g0168141 Helianthus annuus HOM05D004658 ORTHO05D005927 1.1e-108 397.1 273 68.5
arahy.Tifrunner.gnm1.ann1.04PXL7 Arachis hypogaea HOM05D004658 ORTHO05D005927 1.5e-108 396.7 274 68.2
Zm00001eb014640 Zea mays HOM05D004658 ORTHO05D005927 1.9e-108 396.4 271 67.5
Medtr7g109530 Medicago truncatula HOM05D004658 ORTHO05D005927 3.3e-108 395.6 273 66.7
arahy.Tifrunner.gnm1.ann1.T5GBA6 Arachis hypogaea HOM05D004658 ORTHO05D005927 4.3e-108 395.2 274 67.9
SGA_v2.0_scaffold334G49068 Striga asiatica HOM05D004658 ORTHO05D005927 4.3e-108 395.2 274 67.2
Psat3g019800 Pisum sativum HOM05D004658 ORTHO05D005927 7.3e-108 394.4 273 67.8
SalBow3G1126 Salvia bowleyana HOM05D004658 ORTHO05D005927 7.3e-108 394.4 283 66.8
Cc01_g21440 Coffea canephora HOM05D004658 ORTHO05D005927 1.2e-107 393.7 284 66.5
HanXRQChr04g0106121 Helianthus annuus HOM05D004658 ORTHO05D005927 1.2e-107 393.7 273 66.7
Rhsim13G0005000 Rhododendron simsii HOM05D004658 ORTHO05D005927 1.6e-107 393.3 313 60.7
AUR62024648 Chenopodium quinoa HOM05D004658 ORTHO05D005927 2.8e-107 392.5 273 66.7
CDE02G1789 Ceratophyllum demersum HOM05D004658 ORTHO05D005927 3.6e-107 392.1 275 68.0
AUR62011802 Chenopodium quinoa HOM05D004658 ORTHO05D005927 4.7e-107 391.7 273 66.7
Lsat_1_v5_gn_8_166941 Lactuca sativa HOM05D004658 ORTHO05D005927 4.7e-107 391.7 279 66.3
Hund09631 Selenicereus undatus HOM05D004658 ORTHO05D005927 1.4e-106 390.2 274 67.5
Eucgr.H01014 Eucalyptus grandis HOM05D004658 ORTHO05D005927 4.0e-106 388.7 274 67.5
HPP92_008950 Vanilla planifolia HOM05D004658 ORTHO05D005927 4.4e-105 385.2 273 64.5
Sed0011993 Sechium edule HOM05D004658 ORTHO05D005927 8.3e-104 380.9 274 66.4
QL12p019917 Quercus lobata HOM05D004658 ORTHO05D005927 1.1e-103 380.6 323 57.9
Pp3c23_15570 Physcomitrium patens HOM05D004658 ORTHO05D005927 2.4e-103 379.4 273 65.9
Lj2A1206G24 Lonicera japonica HOM05D004658 ORTHO05D005927 9.2e-103 377.5 286 64.0
COL.COLO4_23230 Corchorus olitorius HOM05D004658 ORTHO05D005927 3.5e-102 375.6 274 65.3
TPR.G4093 Trifolium pratense HOM05D004658 ORTHO05D005927 1.1e-100 370.5 273 63.4
Atru.chr5.997 Acer truncatum HOM05D004658 ORTHO05D005927 3.3e-100 369.0 252 68.3
Dinv33118 Davidia involucrata HOM05D004658 ORTHO05D005927 3.3e-100 369.0 252 69.0
Haze_05044 Corylus avellana HOM05D004658 ORTHO05D005927 7.3e-100 367.9 255 68.2
Sabra14G0089400 Salix brachista HOM05D004658 ORTHO05D005927 2.3e-98 362.8 252 67.5
ClCG09G005080 Citrullus lanatus HOM05D004658 ORTHO05D005927 2.2e-96 356.3 253 66.8
Ciclev10018865m.g Citrus clementina HOM05D004658 ORTHO05D005927 3.9e-93 345.5 275 58.9
CBR_g25720 Chara braunii HOM05D005350 ORTHO05D008838 6.8e-90 334.7 233 67.0
SHI28963 Sapria himalayana HOM05D004658 ORTHO05D005927 1.2e-89 334.0 274 56.6
Duzib138G1936 Durio zibethinus HOM05D004658 ORTHO05D005927 4.4e-89 332.0 274 60.2
Cfa005796 Carpinus fangiana HOM05D004658 ORTHO05D005927 9.9e-89 330.9 281 61.2
Haze_04782 Corylus avellana HOM05D004658 ORTHO05D005927 1.6e-86 323.6 302 56.3
Haze_05045 Corylus avellana HOM05D004658 ORTHO05D005927 3.3e-84 315.8 257 61.1
Ciclev10000356m.g Citrus clementina HOM05D004658 ORTHO05D005927 8.1e-83 311.2 274 55.1
ECA232G0051 Erigeron canadensis HOM05D004658 ORTHO05D005927 9.2e-79 297.7 273 56.0
Haze_05046 Corylus avellana HOM05D004658 ORTHO05D005927 1.1e-76 290.8 271 53.9
PRCOL_00005843 Prasinoderma coloniale HOM05D004658 ORTHO05D005927 7.6e-73 278.1 279 52.3
Cre07.g313122 Chlamydomonas reinhardtii HOM05D004658 ORTHO05D005927 6.2e-67 258.5 352 40.3
MCO09G418 Micromonas commoda HOM05D004658 ORTHO05D005927 2.1e-62 243.4 282 44.3
Nitab4.5_0003540g0030 Nicotiana tabacum HOM05D004658 ORTHO05D005927 8.1e-59 231.5 149 70.5
BolC4t28757H Brassica oleracea HOM05D004658 ORTHO05D005927 6.7e-45 185.3 129 68.2
Nn6g32423 Nelumbo nucifera HOM05D004658 ORTHO05D005927 2.0e-41 173.7 114 69.3
RcHm_v2.0_Chr5g0055731 Rosa chinensis HOM05D004658 ORTHO05D005927 1.2e-25 121.3 99 59.6
Mapoly4207s0001 Marchantia polymorpha HOM05D004658 ORTHO05D253917 4.5e-17 92.8 50 86.0
Nn3g19817 Nelumbo nucifera HOM05D004658 ORTHO05D005927 3.2e-15 86.7 61 67.2


User provided reference genes

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