Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 6.1e-121 437.6 231 100.0
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 2.0e-23 113.6 204 35.8
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 5.8e-23 112.1 194 39.2
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 1.7e-22 110.5 159 41.5
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 2.2e-22 110.2 164 39.6
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 4.9e-22 109.0 183 38.3
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 4.9e-22 109.0 183 38.3
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 6.4e-22 108.6 195 35.4
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 6.4e-22 108.6 221 35.3
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.1e-21 107.8 182 35.2
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 2.5e-21 106.7 219 33.3
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 4.2e-21 105.9 159 39.6
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 7.1e-21 105.1 210 34.8
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 7.1e-21 105.1 219 29.7
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 9.3e-21 104.8 171 37.4
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 9.3e-21 104.8 218 31.7
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 1.6e-20 104.0 160 40.0
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 1.6e-20 104.0 164 37.8
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 1.6e-20 104.0 215 31.2
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 2.7e-20 103.2 172 34.9
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 3.5e-20 102.8 155 40.0
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 3.5e-20 102.8 207 29.5
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 6.0e-20 102.1 206 32.0
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 1.8e-19 100.5 217 32.3
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.8e-19 100.5 203 35.5
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 1.8e-19 100.5 155 38.7
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 2.3e-19 100.1 196 33.2
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 2.3e-19 100.1 193 33.2
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 5.1e-19 99.0 232 33.6
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 5.1e-19 99.0 208 30.3
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 6.7e-19 98.6 167 35.9
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 6.7e-19 98.6 222 30.2
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 8.7e-19 98.2 158 36.1
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 8.7e-19 98.2 154 36.4
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 1.1e-18 97.8 169 35.5
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 1.5e-18 97.4 214 30.8
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 1.5e-18 97.4 203 33.0
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.9e-18 97.1 203 34.5
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.9e-18 97.1 201 34.8
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.5e-18 96.7 154 35.7
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 4.3e-18 95.9 161 36.0
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 4.3e-18 95.9 207 33.8
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 4.3e-18 95.9 212 32.1
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 4.3e-18 95.9 159 36.5
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 5.6e-18 95.5 159 35.2
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 5.6e-18 95.5 159 35.8
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 7.4e-18 95.1 185 33.5
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 7.4e-18 95.1 159 38.4
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 9.6e-18 94.7 204 31.4
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 9.6e-18 94.7 159 33.3
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 9.6e-18 94.7 160 35.0
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 9.6e-18 94.7 159 35.8
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 9.6e-18 94.7 207 31.4
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 9.6e-18 94.7 207 31.4
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 1.3e-17 94.4 159 35.2
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 1.3e-17 94.4 159 37.7
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.3e-17 94.4 204 31.4
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 1.3e-17 94.4 161 38.5
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 1.3e-17 94.4 157 36.9
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.6e-17 94.0 159 35.8
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 2.8e-17 93.2 158 35.4
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 3.7e-17 92.8 193 32.6
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 3.7e-17 92.8 216 30.6
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 4.8e-17 92.4 159 34.6
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.8e-17 92.4 159 35.8
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 6.2e-17 92.0 158 36.7
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.4e-16 90.9 160 36.2
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 3.1e-16 89.7 185 31.9
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.0e-16 89.4 154 35.7
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 5.3e-16 89.0 212 33.0
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 9.0e-16 88.2 161 34.2
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 1.2e-15 87.8 217 31.3
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.0e-15 87.0 159 35.8
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 7.6e-15 85.1 158 34.8
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 2.2e-14 83.6 213 33.3
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 4.9e-14 82.4 204 33.3
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 1.1e-13 81.3 208 33.7
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 1.9e-13 80.5 208 33.7
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.9e-13 80.5 154 31.8
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 2.5e-13 80.1 206 33.5
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 2.5e-13 80.1 206 33.5
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 2.5e-13 80.1 166 34.3
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 2.5e-13 80.1 202 32.2
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 3.2e-13 79.7 156 34.6
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 7.1e-13 78.6 157 36.3
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 7.1e-13 78.6 167 31.1
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.2e-12 77.8 166 33.7
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 2.7e-12 76.6 155 36.1
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 7.9e-12 75.1 156 34.6
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 1.3e-11 74.3 158 28.5
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 3.9e-11 72.8 175 33.7
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 8.7e-11 71.6 76 44.7
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 8.7e-11 71.6 140 32.9
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 2.5e-10 70.1 157 28.0
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 1.4e-08 64.3 161 28.6
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 2.4e-08 63.5 159 30.2
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 3.4e-07 59.7 212 30.7
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 1.3e-06 57.8 145 26.2


User provided reference genes

Program Settings