Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 2.1e-165 587.0 791 100.0
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.6e-32 145.6 157 56.7
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.6e-32 145.6 157 56.7
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 1.9e-28 132.1 154 50.0
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 3.2e-28 131.3 153 51.0
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 5.4e-28 130.6 146 51.4
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 1.2e-27 129.4 133 53.4
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 4.6e-27 127.5 122 54.9
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 1.0e-26 126.3 149 49.7
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 1.3e-26 125.9 112 58.0
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 3.0e-26 124.8 129 50.4
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 3.0e-26 124.8 156 45.5
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 3.0e-26 124.8 122 51.6
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 3.9e-26 124.4 127 52.8
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 3.9e-26 124.4 104 60.6
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 6.6e-26 123.6 169 45.0
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 6.6e-26 123.6 129 50.4
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 6.6e-26 123.6 124 54.0
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 6.6e-26 123.6 138 50.0
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 6.6e-26 123.6 127 49.6
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 1.1e-25 122.9 97 62.9
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 1.1e-25 122.9 87 66.7
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.1e-25 122.9 104 58.7
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 1.5e-25 122.5 107 59.8
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 1.5e-25 122.5 125 55.2
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 1.9e-25 122.1 141 51.1
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.9e-25 122.1 153 46.4
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.9e-25 122.1 123 51.2
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 2.5e-25 121.7 123 52.8
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 2.5e-25 121.7 97 61.9
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 2.5e-25 121.7 138 49.3
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 2.5e-25 121.7 105 59.0
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 2.5e-25 121.7 139 47.5
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 2.5e-25 121.7 125 51.2
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 2.5e-25 121.7 147 47.6
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 2.5e-25 121.7 141 50.4
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 3.3e-25 121.3 149 51.0
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 3.3e-25 121.3 124 53.2
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 3.3e-25 121.3 124 53.2
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 3.3e-25 121.3 124 53.2
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 3.3e-25 121.3 141 47.5
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 4.3e-25 120.9 113 55.8
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 4.3e-25 120.9 127 52.8
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 4.3e-25 120.9 127 52.8
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 4.3e-25 120.9 127 52.8
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 4.3e-25 120.9 157 46.5
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 4.3e-25 120.9 109 56.0
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 4.3e-25 120.9 83 68.7
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 5.6e-25 120.6 140 47.9
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 5.6e-25 120.6 140 47.9
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 5.6e-25 120.6 142 48.6
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 5.6e-25 120.6 159 45.9
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 5.6e-25 120.6 140 48.6
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 5.6e-25 120.6 168 45.2
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 7.3e-25 120.2 97 58.8
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 9.6e-25 119.8 157 47.8
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 9.6e-25 119.8 141 49.6
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 1.3e-24 119.4 158 46.8
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.6e-24 119.0 148 48.0
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.6e-24 119.0 140 48.6
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 1.6e-24 119.0 158 44.9
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 2.1e-24 118.6 164 42.7
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-24 118.2 82 69.5
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 2.8e-24 118.2 140 47.9
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 2.8e-24 118.2 157 43.9
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 3.6e-24 117.9 126 51.6
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 3.6e-24 117.9 157 45.9
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 3.6e-24 117.9 147 46.9
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 4.8e-24 117.5 140 47.1
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 4.8e-24 117.5 157 44.6
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 4.8e-24 117.5 151 46.4
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 6.2e-24 117.1 127 48.0
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 6.2e-24 117.1 142 48.6
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 6.2e-24 117.1 86 66.3
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 6.2e-24 117.1 133 48.1
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 6.2e-24 117.1 83 65.1
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 8.1e-24 116.7 117 53.0
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 8.1e-24 116.7 114 52.6
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 8.1e-24 116.7 151 45.0
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 8.1e-24 116.7 126 54.0
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 8.1e-24 116.7 156 44.2
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 1.1e-23 116.3 143 49.0
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 1.4e-23 115.9 123 51.2
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 1.4e-23 115.9 154 41.6
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.4e-23 115.9 103 56.3
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 1.4e-23 115.9 146 45.9
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 1.8e-23 115.5 130 49.2
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.8e-23 115.5 144 45.8
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 2.4e-23 115.2 157 47.8
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 3.1e-23 114.8 135 49.6
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 3.1e-23 114.8 108 52.8
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 3.1e-23 114.8 126 48.4
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 4.0e-23 114.4 142 45.8
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 5.3e-23 114.0 155 44.5
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 5.3e-23 114.0 127 53.5
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 6.9e-23 113.6 146 47.3
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 6.9e-23 113.6 93 59.1
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 9.0e-23 113.2 145 43.4
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 9.0e-23 113.2 86 60.5
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.2e-22 112.8 83 66.3
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 1.2e-22 112.8 144 43.8
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.5e-22 112.5 142 45.1
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 1.5e-22 112.5 132 49.2
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 1.5e-22 112.5 105 52.4
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 2.0e-22 112.1 116 49.1
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 3.4e-22 111.3 146 50.7
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 7.6e-22 110.2 137 46.7
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 2.9e-21 108.2 136 47.8
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 4.9e-21 107.5 159 43.4
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 8.4e-21 106.7 143 45.5
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 1.4e-20 105.9 138 41.3
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 2.4e-20 105.1 79 62.0
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 2.7e-19 101.7 144 42.4
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 3.3e-17 94.7 64 73.4
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 1.3e-16 92.8 127 42.5
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 2.8e-16 91.7 128 43.0
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.4e-15 89.4 144 43.8
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 1.8e-15 89.0 128 42.2
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 1.4e-12 79.3 165 34.5
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.3e-10 72.0 49 65.3
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 3.9e-10 71.2 100 40.0
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 6.7e-10 70.5 62 64.5
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 6.7e-10 70.5 55 61.8
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 1.4e-07 62.8 107 43.0
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 4.5e-06 57.8 65 56.9


User provided reference genes

Program Settings