Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.0e-255 886.3 467 100.0
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 6.5e-13 79.7 164 37.2
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 1.0e-10 72.4 144 34.0
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.4e-10 72.0 153 34.0
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 1.4e-10 72.0 67 49.3
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.4e-10 72.0 136 35.3
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 2.3e-10 71.2 182 30.2
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 3.0e-10 70.9 75 45.3
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 3.0e-10 70.9 61 50.8
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 3.9e-10 70.5 152 35.5
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 3.9e-10 70.5 145 34.5
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 6.7e-10 69.7 75 46.7
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.1e-09 68.9 67 46.3
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 1.5e-09 68.6 100 37.0
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 1.5e-09 68.6 148 34.5
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 2.0e-09 68.2 105 38.1
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 2.0e-09 68.2 106 36.8
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 2.5e-09 67.8 67 46.3
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 2.5e-09 67.8 63 47.6
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 3.3e-09 67.4 119 37.0
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 3.3e-09 67.4 155 33.5
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 4.3e-09 67.0 151 33.8
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 4.3e-09 67.0 75 42.7
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 5.7e-09 66.6 156 37.2
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 5.7e-09 66.6 152 33.6
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 5.7e-09 66.6 106 36.8
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 5.7e-09 66.6 118 35.6
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 7.4e-09 66.2 243 26.3
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 7.4e-09 66.2 138 37.0
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 9.7e-09 65.9 52 57.7
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.3e-08 65.5 227 27.3
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 1.7e-08 65.1 97 41.2
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 2.2e-08 64.7 145 34.5
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 2.8e-08 64.3 145 33.8
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 2.8e-08 64.3 75 45.3
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 2.8e-08 64.3 195 27.7
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 3.7e-08 63.9 75 50.7
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 4.8e-08 63.5 73 45.2
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 4.8e-08 63.5 163 33.7
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 6.3e-08 63.2 143 34.3
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 6.3e-08 63.2 106 35.8
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 8.2e-08 62.8 63 47.6
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 8.2e-08 62.8 205 28.8
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 1.1e-07 62.4 125 35.2
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 1.4e-07 62.0 160 30.0
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 1.4e-07 62.0 90 41.1
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.4e-07 62.0 329 25.5
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 1.8e-07 61.6 129 31.8
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.8e-07 61.6 129 31.8
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.8e-07 61.6 129 31.8
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 2.4e-07 61.2 164 31.1
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.4e-07 61.2 86 39.5
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.4e-07 61.2 62 46.8
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 3.1e-07 60.8 226 27.0
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 4.1e-07 60.5 221 28.5
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 4.1e-07 60.5 235 28.5
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 4.1e-07 60.5 153 30.1
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 5.3e-07 60.1 152 30.3
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 5.3e-07 60.1 155 31.0
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 6.9e-07 59.7 132 32.6
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 6.9e-07 59.7 157 29.3
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 6.9e-07 59.7 72 45.8
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 9.1e-07 59.3 129 31.0
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 9.1e-07 59.3 148 33.1
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 1.5e-06 58.5 98 33.7
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 2.0e-06 58.2 75 38.7
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.0e-06 58.2 121 32.2
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 2.6e-06 57.8 160 30.6
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 3.4e-06 57.4 110 37.3
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 3.4e-06 57.4 220 28.6
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 5.9e-06 56.6 283 25.4
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 7.7e-06 56.2 159 30.2


User provided reference genes

Program Settings