Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 0.0e+00 1120.9 569 100.0
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 1.7e-156 557.0 482 57.7
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 3.5e-138 496.1 453 52.8
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 8.8e-89 332.0 387 42.4
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 2.5e-75 287.3 425 40.2
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 1.8e-33 148.3 308 34.7
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 1.5e-32 145.2 372 31.2
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 4.2e-14 84.0 201 31.8
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 5.1e-12 77.0 160 32.5
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 5.1e-12 77.0 127 40.9
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 8.7e-12 76.3 126 37.3
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 2.5e-11 74.7 120 38.3
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 9.7e-11 72.8 206 26.7
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 1.6e-10 72.0 123 35.8
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 2.2e-10 71.6 127 37.0
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 2.2e-10 71.6 130 34.6
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 2.2e-10 71.6 128 36.7
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 2.2e-10 71.6 191 29.3
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 2.8e-10 71.2 128 39.1
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 2.8e-10 71.2 127 37.0
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 3.7e-10 70.9 130 36.9
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.7e-10 70.9 159 31.4
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 4.8e-10 70.5 128 36.7
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 8.2e-10 69.7 169 31.4
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 1.1e-09 69.3 128 34.4
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 1.1e-09 69.3 131 36.6
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 1.1e-09 69.3 126 36.5
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 1.1e-09 69.3 111 38.7
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 1.4e-09 68.9 107 40.2
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 1.4e-09 68.9 91 39.6
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 1.8e-09 68.6 106 40.6
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 1.8e-09 68.6 106 40.6
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 1.8e-09 68.6 123 35.8
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 1.8e-09 68.6 132 35.6
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 1.8e-09 68.6 109 39.4
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.8e-09 68.6 127 37.0
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 1.8e-09 68.6 131 35.9
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 1.8e-09 68.6 125 34.4
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 2.4e-09 68.2 126 36.5
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 2.4e-09 68.2 131 35.9
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 2.4e-09 68.2 112 37.5
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 3.1e-09 67.8 110 37.3
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 3.1e-09 67.8 197 29.4
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 4.1e-09 67.4 142 33.8
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 4.1e-09 67.4 131 35.1
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 5.3e-09 67.0 108 41.7
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 5.3e-09 67.0 113 38.1
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 9.0e-09 66.2 159 30.8
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 9.0e-09 66.2 154 31.8
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.2e-08 65.9 94 42.6
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.2e-08 65.9 94 42.6
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 1.2e-08 65.9 123 36.6
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 1.5e-08 65.5 107 41.1
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 2.0e-08 65.1 114 35.1
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 2.6e-08 64.7 157 32.5
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 2.6e-08 64.7 114 37.7
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 2.6e-08 64.7 113 36.3
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 3.4e-08 64.3 119 37.0
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 3.4e-08 64.3 123 34.1
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 4.5e-08 63.9 110 37.3
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 7.7e-08 63.2 111 36.0
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 7.7e-08 63.2 124 35.5
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 1.0e-07 62.8 166 26.5
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 1.0e-07 62.8 128 33.6
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 1.3e-07 62.4 112 36.6
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 1.3e-07 62.4 107 38.3
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 1.3e-07 62.4 108 40.7
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 1.3e-07 62.4 124 33.9
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.7e-07 62.0 130 31.5
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.7e-07 62.0 159 30.2
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 2.2e-07 61.6 86 37.2
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 8.5e-07 59.7 131 33.6
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 1.9e-06 58.5 111 36.9
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 2.5e-06 58.2 111 36.9
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 3.2e-06 57.8 111 36.0


User provided reference genes

Program Settings