Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 1.7e-66 256.9 267 100.0
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.7e-24 116.7 102 56.9
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.4e-23 114.4 97 57.7
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 2.3e-23 113.6 110 54.5
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 3.0e-23 113.2 97 56.7
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 6.7e-23 112.1 101 58.4
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 6.7e-23 112.1 101 58.4
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 6.7e-23 112.1 101 58.4
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 1.1e-22 111.3 101 57.4
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 1.5e-22 110.9 101 54.5
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 4.8e-21 105.9 99 53.5
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.3e-21 105.5 135 44.4
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 8.2e-21 105.1 120 50.0
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 1.8e-20 104.0 96 55.2
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 5.3e-20 102.4 99 51.5
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.2e-19 101.3 106 48.1
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 1.2e-19 101.3 97 53.6
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 1.6e-19 100.9 101 51.5
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 2.7e-19 100.1 99 51.5
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 5.9e-19 99.0 99 47.5
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 1.0e-18 98.2 96 53.1
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.7e-18 97.4 99 50.5
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.9e-18 96.7 131 42.0
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.9e-18 96.7 106 45.3
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 2.9e-18 96.7 99 49.5
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.5e-18 95.5 131 42.0
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.5e-18 95.5 131 42.0
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 8.5e-18 95.1 99 47.5
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.1e-17 94.7 101 46.5
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.5e-17 94.4 102 49.0
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 3.2e-17 93.2 99 48.5
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 4.2e-17 92.8 99 47.5
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 4.2e-17 92.8 102 48.0
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 5.5e-17 92.4 100 47.0
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 5.5e-17 92.4 102 47.1
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 7.2e-17 92.0 98 45.9
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.2e-16 91.3 100 49.0
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.1e-16 90.5 131 40.5
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 2.1e-16 90.5 99 50.5
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 2.1e-16 90.5 102 47.1
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 2.7e-16 90.1 97 49.5
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 3.6e-16 89.7 126 40.5
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 3.6e-16 89.7 103 45.6
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.1e-16 89.0 95 48.4
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 8.0e-16 88.6 101 47.5
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 6.8e-15 85.5 135 41.5
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.0e-14 84.0 98 44.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.6e-14 83.6 101 46.5
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 3.4e-14 83.2 99 44.4
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 9.8e-14 81.6 101 46.5
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 9.8e-14 81.6 101 46.5
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.7e-13 80.9 101 47.5
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.7e-13 80.9 101 44.6
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 4.8e-13 79.3 126 39.7
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 8.3e-13 78.6 99 41.4
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 8.3e-13 78.6 98 42.9
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 1.1e-12 78.2 99 42.4
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.8e-12 77.4 98 43.9
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 2.4e-12 77.0 91 45.1
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 2.4e-12 77.0 105 40.0
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 3.1e-12 76.6 101 46.5
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 5.4e-12 75.9 99 41.4
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.2e-11 74.7 97 41.2
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 2.0e-11 73.9 95 38.9
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 3.5e-11 73.2 100 42.0
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 4.5e-11 72.8 115 38.3
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 5.9e-11 72.4 98 44.9
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 5.9e-11 72.4 98 39.8
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 7.7e-11 72.0 63 57.1
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 1.0e-10 71.6 101 40.6
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 1.3e-10 71.2 101 44.6
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 1.7e-10 70.9 97 39.2
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 2.2e-10 70.5 71 49.3
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 2.2e-10 70.5 101 42.6
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 2.2e-10 70.5 109 39.4
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 2.9e-10 70.1 101 38.6
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 3.8e-10 69.7 58 58.6
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 3.8e-10 69.7 101 37.6
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 5.0e-10 69.3 99 39.4
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 8.5e-10 68.6 112 38.4
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 8.5e-10 68.6 99 39.4
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.1e-09 68.2 70 51.4
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.5e-09 67.8 57 54.4
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 1.9e-09 67.4 126 37.3
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 1.9e-09 67.4 72 48.6
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.9e-09 67.4 101 40.6
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 1.9e-09 67.4 99 40.4
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 2.5e-09 67.0 102 39.2
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 5.5e-09 65.9 85 43.5
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 7.2e-09 65.5 99 38.4
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 9.4e-09 65.1 55 54.5
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 1.2e-08 64.7 69 49.3
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 1.2e-08 64.7 99 41.4
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.6e-08 64.3 103 43.7
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.6e-08 64.3 65 47.7
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 2.1e-08 63.9 57 52.6
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.7e-08 63.5 65 47.7
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.7e-08 62.8 107 39.3
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.7e-08 62.8 107 39.3
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 4.7e-08 62.8 68 47.1
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 6.1e-08 62.4 92 40.2
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.0e-07 61.6 104 38.5
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 1.0e-07 61.6 71 50.7
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 1.8e-07 60.8 95 37.9
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 1.8e-07 60.8 104 38.5
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.3e-07 60.5 78 46.2
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 4.0e-07 59.7 97 39.2
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 6.8e-07 58.9 73 42.5
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 8.8e-07 58.5 99 41.4
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 8.8e-07 58.5 97 38.1
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 1.2e-06 58.2 75 40.0
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 2.6e-06 57.0 55 47.3
Os01g0829100 Oryza sativa ssp. japonica HOM05D007663 ORTHO05D009455 5.7e-06 55.8 97 37.1
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 7.5e-06 55.5 100 37.0


User provided reference genes

Program Settings