Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 1.8e-137 492.7 255 100.0
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 2.5e-51 206.5 229 55.9
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 1.6e-45 187.2 155 59.4
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 5.6e-43 178.7 173 56.1
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 2.6e-40 169.9 153 58.8
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 1.1e-38 164.5 148 54.7
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 5.4e-38 162.2 141 58.9
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 1.6e-37 160.6 149 55.7
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 2.7e-37 159.8 142 55.6
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 7.8e-37 158.3 175 52.6
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 1.3e-36 157.5 155 52.3
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.7e-36 157.1 171 50.3
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 3.0e-36 156.4 170 50.0
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 3.0e-36 156.4 171 51.5
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 3.9e-36 156.0 203 43.8
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 3.9e-36 156.0 174 48.9
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 5.1e-36 155.6 144 56.9
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 5.1e-36 155.6 170 50.6
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 6.6e-36 155.2 149 53.7
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 6.6e-36 155.2 149 53.7
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 6.6e-36 155.2 144 56.2
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 6.6e-36 155.2 171 49.1
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 6.6e-36 155.2 177 48.0
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 8.7e-36 154.8 149 53.0
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 1.5e-35 154.1 211 45.0
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 1.5e-35 154.1 180 48.3
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 1.5e-35 154.1 174 47.7
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 1.5e-35 154.1 160 54.4
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 1.9e-35 153.7 173 48.6
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 2.5e-35 153.3 156 51.9
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 2.5e-35 153.3 174 48.3
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 2.5e-35 153.3 144 56.2
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 3.3e-35 152.9 154 52.6
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 3.3e-35 152.9 171 48.0
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 3.3e-35 152.9 171 48.0
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 3.3e-35 152.9 171 48.0
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 3.3e-35 152.9 171 48.5
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 4.3e-35 152.5 173 47.4
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 4.3e-35 152.5 171 49.7
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 4.3e-35 152.5 155 53.5
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 5.6e-35 152.1 174 47.1
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 7.3e-35 151.8 154 51.9
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 7.3e-35 151.8 149 52.3
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 7.3e-35 151.8 154 52.6
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 9.6e-35 151.4 148 51.4
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 9.6e-35 151.4 148 51.4
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 9.6e-35 151.4 175 49.1
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 1.3e-34 151.0 142 54.9
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 2.1e-34 150.2 140 55.7
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 2.1e-34 150.2 174 46.6
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 2.1e-34 150.2 145 58.6
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 2.1e-34 150.2 170 51.2
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 2.1e-34 150.2 143 53.8
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 2.1e-34 150.2 172 49.4
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 2.1e-34 150.2 170 48.2
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 2.8e-34 149.8 146 52.1
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 3.6e-34 149.4 198 46.0
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 3.6e-34 149.4 153 53.6
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 4.8e-34 149.1 171 48.5
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 4.8e-34 149.1 170 51.2
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 4.8e-34 149.1 146 51.4
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 4.8e-34 149.1 203 44.8
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 8.1e-34 148.3 166 51.2
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 8.1e-34 148.3 144 51.4
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 8.1e-34 148.3 147 53.1
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 1.1e-33 147.9 146 54.1
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 1.1e-33 147.9 170 50.0
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 1.4e-33 147.5 173 46.8
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 1.8e-33 147.1 146 52.1
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 1.8e-33 147.1 142 55.6
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 2.4e-33 146.7 147 53.1
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 3.1e-33 146.4 143 53.8
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 5.3e-33 145.6 141 51.1
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 6.9e-33 145.2 154 46.8
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 9.0e-33 144.8 184 44.6
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 9.0e-33 144.8 145 51.7
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 9.0e-33 144.8 141 53.9
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 2.0e-32 143.7 142 54.2
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 3.4e-32 142.9 141 53.9
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 3.4e-32 142.9 143 49.0
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 4.4e-32 142.5 173 45.7
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 4.4e-32 142.5 144 51.4
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 4.4e-32 142.5 156 45.5
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 5.8e-32 142.1 170 46.5
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 1.3e-31 141.0 213 40.4
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 1.7e-31 140.6 144 49.3
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 8.4e-31 138.3 142 52.1
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 1.1e-30 137.9 142 52.1
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 1.4e-30 137.5 143 50.3
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 3.5e-29 132.9 142 49.3
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 2.3e-28 130.2 195 40.5
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 8.7e-28 128.3 154 46.8
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.5e-24 117.5 110 58.2
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 5.4e-22 109.0 109 55.0
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 3.5e-21 106.3 162 40.1
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 2.8e-18 96.7 134 42.5
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 3.8e-15 86.3 164 36.6
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.4e-14 84.3 81 54.3
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.4e-14 84.3 81 54.3
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 9.3e-14 81.6 84 47.6
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 1.6e-13 80.9 84 50.0
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 9.6e-11 71.6 153 32.0
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 3.7e-10 69.7 64 57.8


User provided reference genes

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