Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 8.5e-188 660.2 343 100.0
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 1.8e-100 370.2 345 58.6
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 2.8e-98 362.8 347 56.5
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 4.8e-98 362.1 319 62.7
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 1.7e-95 353.6 345 57.1
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 6.5e-95 351.7 351 56.4
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 4.7e-93 345.5 346 54.9
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 8.8e-92 341.3 351 56.1
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 5.7e-91 338.6 348 55.2
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 3.7e-90 335.9 345 54.5
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 7.0e-89 331.6 337 55.2
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.5e-88 330.5 340 55.6
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 3.8e-87 325.9 343 53.6
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 6.5e-87 325.1 346 55.5
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 6.5e-87 325.1 339 54.3
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 1.1e-86 324.3 339 54.3
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 1.9e-86 323.6 315 58.1
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 2.5e-86 323.2 340 55.9
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.5e-86 322.0 339 54.0
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 3.6e-85 319.3 346 50.0
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 3.6e-85 319.3 315 54.9
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 1.0e-84 317.8 344 54.1
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.0e-84 317.8 315 54.6
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.4e-84 317.4 339 53.7
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 2.6e-83 313.2 352 52.8
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 4.4e-83 312.4 315 53.7
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.7e-82 309.3 346 52.6
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.0e-79 301.2 345 50.4
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 5.0e-79 298.9 302 57.6
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 1.9e-78 297.0 340 48.5
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 2.3e-76 290.0 342 49.1
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 5.2e-76 288.9 348 48.6
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 1.7e-74 283.9 346 47.4
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 1.1e-73 281.2 342 48.0
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.1e-73 281.2 264 61.4
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 1.4e-73 280.8 359 47.6
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 1.2e-72 277.7 331 49.8
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 2.7e-72 276.6 302 54.3
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 5.9e-72 275.4 331 48.9
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 7.7e-72 275.0 208 67.8
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 7.7e-72 275.0 342 47.1
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 7.7e-72 275.0 347 46.1
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.0e-71 274.6 344 48.3
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 2.5e-70 270.0 331 48.9
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 2.7e-69 266.5 321 50.5
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 2.7e-69 266.5 311 50.8
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 3.6e-69 266.2 346 46.2
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 8.8e-68 261.5 344 46.2
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.5e-67 260.8 349 46.1
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 2.6e-67 260.0 347 45.5
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 5.7e-67 258.8 339 46.3
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 7.5e-67 258.5 356 46.3
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.7e-66 257.3 347 45.8
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 6.3e-66 255.4 337 45.7
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 1.1e-65 254.6 349 44.1
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 4.1e-65 252.7 348 43.1
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 3.5e-64 249.6 336 45.8
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.0e-63 248.1 261 55.2
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.7e-63 247.3 261 55.2
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 3.6e-61 239.6 336 45.5
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 4.0e-60 236.1 329 44.1
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 8.9e-60 235.0 329 44.1
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.3e-58 231.1 331 44.1
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 4.9e-58 229.2 328 41.5
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 1.1e-57 228.0 339 42.8
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 1.4e-57 227.6 322 43.2
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 4.1e-57 226.1 326 42.0
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 3.9e-55 219.5 303 45.2
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 1.5e-54 217.6 275 48.7
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 5.6e-54 215.7 348 41.7
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.2e-51 208.0 294 45.2
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 1.5e-51 207.6 301 44.5
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.5e-51 207.6 326 40.8
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.9e-50 203.4 250 49.6
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 1.1e-49 201.4 337 41.2
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 1.1e-49 201.4 337 41.2
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 2.4e-49 200.3 337 41.8
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.7e-48 196.8 215 54.0
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 2.7e-48 196.8 207 58.0
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 1.1e-46 191.4 267 43.8
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 1.9e-46 190.7 352 36.9
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 5.6e-46 189.1 259 45.2
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 3.6e-45 186.4 268 43.3
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 3.2e-41 173.3 334 33.2
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 5.4e-41 172.6 355 35.5
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 2.7e-40 170.2 336 36.0
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 6.0e-40 169.1 283 41.3
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 3.9e-39 166.4 336 35.7
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 1.1e-38 164.9 349 36.4
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 8.1e-37 158.7 337 35.0
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 1.8e-36 157.5 341 34.6
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 2.3e-36 157.1 341 34.9
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 2.3e-36 157.1 341 34.9
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 5.2e-36 156.0 341 34.6
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 5.2e-36 156.0 337 34.4
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 4.4e-35 152.9 337 34.7
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 3.2e-33 146.7 342 33.6
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 1.0e-31 141.7 142 53.5
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.1e-30 138.3 338 34.3
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 4.3e-30 136.3 234 41.5
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 4.3e-30 136.3 338 34.0
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 4.0e-28 129.8 287 34.8
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 2.9e-26 123.6 137 48.9
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 3.0e-23 113.6 278 32.4
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 6.6e-23 112.5 297 30.0
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 1.9e-22 110.9 289 31.1
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 2.5e-22 110.5 322 30.7
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.3e-21 108.2 273 33.3
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 9.0e-20 102.1 316 28.5
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 2.0e-19 100.9 311 28.9
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 7.9e-16 89.0 311 26.7
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.3e-15 87.4 118 38.1
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.3e-15 87.4 118 38.1
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.0e-07 62.0 72 40.3
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 1.3e-07 61.6 126 35.7
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 4.3e-06 56.6 208 29.8


User provided reference genes

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